Basic Information

Insect: Ceratosolen fusciceps
Gene Symbol: Rreb1
Assembly: GCA_018883505.1
Location: RCIC01000003.1:12755253-12766025[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0085 0.86 10.3 0.1 1 23 56 78 56 78 0.96

2 16 0.00027 0.028 15.0 0.1 1 23 94 116 94 116 0.97

3 16 1.9e-07 2e-05 24.9 1.3 1 23 122 145 122 145 0.98

4 16 0.85 87 4.0 0.1 1 23 237 261 237 261 0.92

5 16 0.02 2.1 9.1 2.7 2 23 267 289 267 289 0.95

6 16 4 4.1e+02 1.9 0.6 1 14 345 358 345 364 0.79

7 16 0.059 6 7.7 0.1 1 23 485 507 485 507 0.96

8 16 2.1e-05 0.0022 18.5 0.3 1 23 516 538 516 538 0.98

9 16 0.001 0.11 13.2 2.8 1 23 544 567 544 567 0.97

10 16 0.00038 0.039 14.5 3.0 1 23 926 949 926 949 0.97

11 16 0.00055 0.056 14.0 0.1 3 23 1248 1268 1246 1268 0.97

12 16 0.77 78 4.2 6.5 1 23 1274 1297 1274 1297 0.97

13 16 0.0035 0.35 11.5 2.2 1 23 1337 1361 1337 1361 0.97

14 16 4.6 4.7e+02 1.7 2.5 1 23 1506 1529 1506 1529 0.86

15 16 0.0094 0.95 10.2 0.4 2 23 1605 1626 1604 1626 0.94

16 16 1.1 1.1e+02 3.6 8.2 1 23 1632 1654 1632 1654 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0085	0.86	10.3	0.1	1	23	56	78	56	78	0.96
2	16	0.00027	0.028	15.0	0.1	1	23	94	116	94	116	0.97
3	16	1.9e-07	2e-05	24.9	1.3	1	23	122	145	122	145	0.98
4	16	0.85	87	4.0	0.1	1	23	237	261	237	261	0.92
5	16	0.02	2.1	9.1	2.7	2	23	267	289	267	289	0.95
6	16	4	4.1e+02	1.9	0.6	1	14	345	358	345	364	0.79
7	16	0.059	6	7.7	0.1	1	23	485	507	485	507	0.96
8	16	2.1e-05	0.0022	18.5	0.3	1	23	516	538	516	538	0.98
9	16	0.001	0.11	13.2	2.8	1	23	544	567	544	567	0.97
10	16	0.00038	0.039	14.5	3.0	1	23	926	949	926	949	0.97
11	16	0.00055	0.056	14.0	0.1	3	23	1248	1268	1246	1268	0.97
12	16	0.77	78	4.2	6.5	1	23	1274	1297	1274	1297	0.97
13	16	0.0035	0.35	11.5	2.2	1	23	1337	1361	1337	1361	0.97
14	16	4.6	4.7e+02	1.7	2.5	1	23	1506	1529	1506	1529	0.86
15	16	0.0094	0.95	10.2	0.4	2	23	1605	1626	1604	1626	0.94
16	16	1.1	1.1e+02	3.6	8.2	1	23	1632	1654	1632	1654	0.98

Sequence Information

Coding Sequence: ATGGCTGAACTCCGCGGCGGCGTCGTCGTCGTCGTCGTCGTCGTCCCCTTCTTCCACCTTCTCCGCACTCTGACTGCTGAGACTGGTCCTGATCAGCGCGACGCCGGCAACGAGAGCCAAACGGATGTTGCATCATCACCACTGGTTGAGCAGCCGGAAGGTAGCCACCCGTGCCCGGCCTGTCCACTCGTTCTCGCGAGTTCCCGCGACCTGACGACTCACCTGCGAGGACACAACTCACCCCGAAGCTTGAGCGATTGCAGCGGGGAGGAGGTCGACTACGCCTGCGGGGTCTGCCACAAGGTCCTTAGCTCCGCCAGCTCCCTCGACCGACACGTTCTCGTCCACTCGGGTGAGCGACCCTTCAAGTGCAAGTACTGCGACATGGCCTTCACGACGAACGGCAACATGAACCGGCATCTGCGCACCGCCCACCGGGCCCTCTCGCCCTCCCACAGCTGCACCGACTCCGAGGGCAGCTGCGACTCGGAGCGGCCCCTCAAGCGCCGGCTCATCCACGAGGAGTACAATAATAACGAGGTGGCCAAGCGCAGCAGCTCACCGGAGCTCCTGGTCGAGCGCGCCAAGCGCAAGTGCTCCGAGGAGTACGGCGACGAGCTCGAAGGCCATCGTCGGAGGAAGATCCTCCTGGGCAACAGTGGACGAACGGAGCTCGGGCCCGGTTACGGGGAGGCCGTAACCGGTGGGCACAACTGCGGCCTCTGTGGACGTCAGGACTTTGCGACGAGCGCGCTACTCGATGCGCACCTCGAGCGCGCCCACCCGGACGTCCCGGCCAAGTGCGACAGCTGTAATCTATCGTTCAAGAATCACCGGGCCTTGAACCTCCACCGGTTCATGGTGCACTTTAACGAGCACGGGGCCGCGGCCCTCAGCCGCAACCTACGCAATTCCGTCGTCGGATTCAACGACCTGACCTTCGTCGACTTCTCTGCCGACAAGTTCCCGGCTATCGCCCGGGCTGTATGCGAGCGCTCGCTCCACCGGCCGGCCTCCGGCGAAACTCCCAGGTACCAGTGCTCAAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGGCCACGAGACCGACTGCGGCGGCCTCCACCTTGGCCCGGAGATCGCGGACAGGACTGTCGCCCGCGAGCAGCAGCAGTCGACGCGCGACGACTTCTTCGCGGGCCTCGACCTGCAGAACAAGGCGGCCCTCGCCGAGGCCAAGGAGGGCAAGGATCTCGCTGACATTCAGAGCATCATAAGCGTCACCTCGGGCCCGATGATCCTGCAGAACTTATCGCGCTCGGACGCCGGTACCCCGGATAACTGTCGCATCAAGCAGAGCCTCGGCTCCTCCGGGTCCTCGGGTACCCCGTCATCCGAGTACCACGAGGAAGAGGCGCAGGACGCCTTCGCCGCAGAATTCCGTCGGATGAAGCTCAAGGGAGAGTTCCCCTGCAGACTATGCAGCGCGGTCTTTCCGAATCTCCGGGCCCTCAAGGGTCACAATCGGGCTCACATGGGGGTCGGCCCAGGTATGCCCTATCCCTGTAATATGTGCCCCTACAGTAGCACCGACAAGGCCACCCTCGTCAGGCACCTGCGTTCGCACAACGGTGACCGGCCATACGAGTGCTCCCTATGTAACTATGCCTTCACAACCAAAGCTAACTGCGAAAGACACGTGCGGAACCGCCACGGGAAGCTGTCGCGCGAGGAGATCAAGAGCGTCCTTATCTATCACCCGAGCGAGGACTCGACAAACGACAGCAGCCTCGAGCGAGCAATCAAGGACGAGGTTAAGCTGCGTCAGCCGCAACTTCTCGGCATGAACCAACTCGGACATTACGAGAAGGGCGAGGCCTTCTCGAGGCCGGCTAGTCTCCTGCAACCTCTCGAGCTCACCTACAGGTGCGACGAAGTGCTCGACAAGTCCCGGCACACGAGCCTCAAGCAGCAGCCGGAGCACCACGACATGGACTCGCGGTCCTCAGACAGCAGCGTCTCCGCCTCACGGGAGGCTAAGCCCGAGCAGCGCCAAGTTATGCAGCTTGGGCCCATGGACCTCAAGACGTCTTCTGGCCAAGAGACGGCAGGGCCCACGACCGAGGACGCGCCCCTCGACCTCTCTATGGATGTCCTCGACCTGAGTAAGAACGGGTCCGGCGAGGTGCCGGGACTTACCAGGGCCGACGAGAGCGGCGACGAGCTAAACGGGCCCGGTGCCGAGGATCTGAGCGCTCACCATCAAAAGGACATCTACGACACGACTAACCAGCTCCTCTTGACCCAGGCACTTCTAAAGGCCGGCCAAGTTGGCGCCCAGCCATCCAGCCTCGAGAGCTTCTACGCAAACGCCCATTTGATATACCGAAATTTCGGGACGTTCCCCGGCGTCGGGGCGGGCATCCTCCAGCCGTATCTGTTCAATCCTCACCTCTTCAGCCAGGACTTCGCCATGAAGGAGCGACTGCAGAAGGAGCTCGTGCGGGGTCTTCAAACCAGCGGGGGCAGCCTCGTGGAGCCCCCGGCTCCCGGGTACGGGGCGGCCTACCCGGCGGCCGCGCGTAGTGCCGCCCCCATGAGCCACGGGGTCAACGAAGCCAACGATTACGCGGGCCTCGTCTCCTCGAAGCTCATGAGCAAGAACCTCTCGCCCCGACAGCTCGAGAAGCTCGAGGCCTCGCCGGCTTCCAATTCCGTGAAGATGGTCATTAAGAATGGCGTCCTCATGCCCAAGCAGAAGCAGCGCCGCTACAGGACCGAGCGACCATTCACTTGCGAGCACTGCTCCGCGCGGTTCACCCTCCGCAGTAACATGGAGCGGCACATCAAGCAACAGCATCCTCAGCACTGGAGCCAGCGGCCCCGGGGCGGTCACTCCACCAGGGGTAGACCGCCCACCAACCCCCCGAGCCTTATGCAGAGTATGGGGGGCGGCCAGGCCTCGTCACAACAGCAGCATATCGGCGGTGGCCAGTCCTACTCGGGTCTCCTGCCGAAGCTCGGCCAGGGTCTGCCCGGCGATTACTCTGGCAAACACGCCATCTCCGACCAGGTGAAATACGCGATTTTGGCCCAGCAGCTCAAGGCGAGCAAGCACGAGGAGAACAACGACAGCGACGAGGAGCTGGTGATCGACGAGGAATCCGCGGCTCATCCGGACAAGGAAGCTCGCAACGGGGGCGGTGGGGCCAAGCAGGAGCCGAGCGAGCGCACCCTGAGTCTGTTGCGGGGCAAGCTCGAGGCCAGCGTCGAGTGCGCGAAGCTCGGTGACGGGCCGGAGGCCAAGGCCGCTGGTAAGCGCGGCCAGGAACATCGACAGGCCCTCGCGATAAAGCAGGAGATGGATAATCAATTGGAGGCCGAGGGCACGACGCGCTCCGGCAGGGCCGAGGAGTCAGGCGACTCCGAGACCGAGGAGTCCTTGAAGGAGTCTGGACTGCGGAAATTGACGGTGAAGACCGAGCATAACGAGAACGAGGACCTGGCGAGCGTCTCGGAGATCTTGGACAACGCGTCCCAGCACTACCAGCAATTCCAGTCGCAGTACATGAGCGACGAGGAGGGTCTGGTCGCGTCGACGAGTGACTGTAATCAGTCGGGCAGTGACGAGAAGTCCGACTCGATGAACTCCGGCAACTCCGGCAACTCCTCGACTTCCAAGAAGAAGAAGAAAATGAAAAAGAAGAAGAAAAAGAAGAAGTCGGCCTACTCGATGGCCCCGAACCGCGTCATTTGCCCGTACTGCGAGCGGCCCTTCCCCTGGACGTCCTCGCTTAGGCGGCACATTCTAACGCACACGGGCCAGAAGCCGTACCAGTGCATGCACTGCTCGCTCCTCTTCACGACCAAGTCCAACTGCGATCGCCACCTCCTCAGGAAGCACAAAGCCAACGCGAACAAGATACGCCGGGCGCGCAGCACCTCGTCGCCCGAGGCCCAGGAAGCCCCGGCAACGACGAACGGCGGCCAATTCTCGATGAGGAACGTACCCGAGCGGCCCTACAAGTGCAACCAATGCCCGAGCTCGACCTTTTCGACCCTCGGGAATCTGAAAAAGCACAGGTCTACCAAGCACGCGCGCATCAGCCCGAAATCCCGGCCCGAGTCGCCCTCAAGCGAGGCCCACAACAGTCCCGAGCAGAGCCCACCGAGCGAGGCTCCCCAGGACTCTCAGCCCGAGCTCAGTCAGCCCGAGGCCCAGCCCGACGACTGCCTCCCCGAGAGCCAGTCGGACTTCCAGCCCCAGTGCCAGTCCGACTGCCAACCGGAGGAGGCGGCACGCCACTACGTCCCGGACTGCCCCAAGCAGAACGACCAAAGCGGCTACGAGAGCCAGTCCTCCGGCGATTCGGAAAACCTCGAGAACAGCGGCTCGACGAGCACGAGCGGCGAGCCCAAGGTGCCGGGCTGCGCGAACGGGCCCGCGAGTCTTGTCCCGGGCAACGACGCCTCGAGATCGCGGCGAGCCTCGCCCAGGTCCTCGCCCGGCCCGACGACCGAGGCGCCCTTCAAGTGCCACCTATGCGACAGCGGCTTCGCCGAGAGGCAAGACTGCCTCGAGCACATAAAGGACAACCACGAGCACTCGTACGAGATGCTCGTTGCTAAGGGTGCGCTCGACATGGACATCGACGGTCACGAGGAGCAACAGATGGCCACGGCGCCGCAGCCACCACCACCACCCCCGCCGCCGCCGCCGCCGCCGCAGCAGCAGCAACCGCAGCCGCTGTCCCAGTCCCTTCAGCATCCGAGCGACGGGGAGGAGAGACGCGGCAGATTCCCCGACTACAGCAACAGAAAGGTTGTCTGCGCCTTCTGCATGCGCCGCTTCTGGTCAGCGGAGGACCTGCGCCGGCACATGCGCACGCACACGGGCGAGCGGCCGTTCTCCTGCGACATCTGCTGTCGGCGCTTCACCCTGAAGCACAGCATGCTGCGTCATCGGAAGAAGCACGAGTCCGTCGACTCGGCGATGTACGTGGGGACGAGCGGCGACGAGGACGGGGGCTCGGTCGGCCCGATGAGCCAGCCGCCGACGATAGCGCCCCGGTCGCAGCCCGGAGCGAGCAGCGCGCCCCAGCTTGGGAGCGTCGCTACCGGTGACGCGGCCCCCAACTGCCTCGGACGTTTCAATCCCTACGAGAAGCTGACGACCCTGGCGGGGAAGTTAACGGCCGGGGTCTCACCGAGTCTGGCCCTCGACGCGAACGACAACAACGATAACGACCTAATCTCCAATCTCCTCGGCATCAGGGACAAGAGCATCATCGACCGGGTTCTCCAAGCCTCGGCCGACGACGCCGCGAAGCTCCTCGGCGTCAAGGGCAATCACGAGTAG
Protein Sequence: MAELRGGVVVVVVVVPFFHLLRTLTAETGPDQRDAGNESQTDVASSPLVEQPEGSHPCPACPLVLASSRDLTTHLRGHNSPRSLSDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRALSPSHSCTDSEGSCDSERPLKRRLIHEEYNNNEVAKRSSSPELLVERAKRKCSEEYGDELEGHRRRKILLGNSGRTELGPGYGEAVTGGHNCGLCGRQDFATSALLDAHLERAHPDVPAKCDSCNLSFKNHRALNLHRFMVHFNEHGAAALSRNLRNSVVGFNDLTFVDFSADKFPAIARAVCERSLHRPASGETPRYQCSKCLRAFPCRSALDGHETDCGGLHLGPEIADRTVAREQQQSTRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPMILQNLSRSDAGTPDNCRIKQSLGSSGSSGTPSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCSAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDSSLERAIKDEVKLRQPQLLGMNQLGHYEKGEAFSRPASLLQPLELTYRCDEVLDKSRHTSLKQQPEHHDMDSRSSDSSVSASREAKPEQRQVMQLGPMDLKTSSGQETAGPTTEDAPLDLSMDVLDLSKNGSGEVPGLTRADESGDELNGPGAEDLSAHHQKDIYDTTNQLLLTQALLKAGQVGAQPSSLESFYANAHLIYRNFGTFPGVGAGILQPYLFNPHLFSQDFAMKERLQKELVRGLQTSGGSLVEPPAPGYGAAYPAAARSAAPMSHGVNEANDYAGLVSSKLMSKNLSPRQLEKLEASPASNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPSLMQSMGGGQASSQQQHIGGGQSYSGLLPKLGQGLPGDYSGKHAISDQVKYAILAQQLKASKHEENNDSDEELVIDEESAAHPDKEARNGGGGAKQEPSERTLSLLRGKLEASVECAKLGDGPEAKAAGKRGQEHRQALAIKQEMDNQLEAEGTTRSGRAEESGDSETEESLKESGLRKLTVKTEHNENEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSMNSGNSGNSSTSKKKKKMKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKIRRARSTSSPEAQEAPATTNGGQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARISPKSRPESPSSEAHNSPEQSPPSEAPQDSQPELSQPEAQPDDCLPESQSDFQPQCQSDCQPEEAARHYVPDCPKQNDQSGYESQSSGDSENLENSGSTSTSGEPKVPGCANGPASLVPGNDASRSRRASPRSSPGPTTEAPFKCHLCDSGFAERQDCLEHIKDNHEHSYEMLVAKGALDMDIDGHEEQQMATAPQPPPPPPPPPPPPQQQQPQPLSQSLQHPSDGEERRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSAMYVGTSGDEDGGSVGPMSQPPTIAPRSQPGASSAPQLGSVATGDAAPNCLGRFNPYEKLTTLAGKLTAGVSPSLALDANDNNDNDLISNLLGIRDKSIIDRVLQASADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -