Cfus003760.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratosolen fusciceps
Gene Symbol
mecom-b
Assembly
GCA_018883505.1
Location
RCIC01000001.1:4063178-4067925[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0074 0.75 10.5 0.3 2 23 56 78 55 78 0.92
2 8 0.00014 0.014 16.0 0.3 1 23 114 142 114 142 0.91
3 8 3e-06 0.00031 21.2 2.6 1 23 148 170 148 170 0.95
4 8 1.5e-05 0.0015 19.0 6.0 1 23 176 198 176 198 0.99
5 8 0.058 5.9 7.7 0.5 2 21 206 225 205 226 0.94
6 8 1.6e-08 1.6e-06 28.4 1.7 1 23 539 561 539 561 0.99
7 8 2.3e-07 2.3e-05 24.7 1.7 1 23 567 590 567 590 0.97
8 8 4.7e-06 0.00048 20.6 3.5 1 23 596 618 596 618 0.99

Sequence Information

Coding Sequence
ATGGGCTGTCCTGTCCAGGTTCCGGTCAGCCGTCTTCGCGGGACACGGGCGCCCGAACTGGAGCATCGCAACTATTATTGTCTGTCGCGCCGGGTTCACTCCTCTCAGCACAGCGGGGCATCGCACGCCGACGAAGATAGAGAAGAGGACGAGGACGTCGAGATAAGGTGCACAGTCTGCGACAAGCCCTTCCAGGACATCGAAGTGCTGAACAATCACTTGGTGATCTGTCATCGGTATCCGGCCCGGGAGCACTGCTGCTCCAGCTGTCCCAGTGGCTACGCTTGGCGGCCCCTCCTTGTGCGGCATCGTGCCATCGTGCACGGCGACATCCGCAAGTATCCCTGCGAGAACTGTTCCAAGCCGGACGACCCGCAGGTCTTCACCGATCCGTCGAACCTGCAGCGGCACATTCGGGCCCAGCACGTCGGCGCCCGGAGCCACGCCTGCACCGAGTGCGGCAAGACCTTCGCGACGAGCTCCGGACTCAAGCAGCACACCCACATCCACAGCAGCGTCAAGCCCTTCCAGTGCGAGGTCTGCTTCAAGTCCTACACCCAGTTCTCGAACCTCTGTCGGCACAAGCGCATGCACGCCAAATGCCGCATGCAGATCACCTGCGTCAAGTGCAGCGCCCAATTCAGTACCGTGACCTCCCTCTCCAAGCATAAGCGCTTCTGCGACTCGACGCCCCCGGCCCCGGCCCCCGTGCCAGGCATGTCGCAGCCTCAGCCTCAGCACAATCCCTTCCTGTTTCCCCGGCAGCCCTTGCCCTTCTACCCGCCGAGCCTCATTGGCCACTACTCGGCCTCGCTCTTCCGCGGAGCCGGCAATCTCCTTGGGCTGCCGCTCCTCTTCCCTCCCAAGACGACTGAGGAGCCGGAACGCGGGCCGAGGTCCGGGCCCCCGGCACCCCCGCCCGCTGCACCCCCGGCACCCAGTAGTAGCAAGGTCTCGGCCTCGCCTGCTACCGCGGAGGAGGCGACCTCGAGTCTGAGGCCCTCGCCGGCTCGGCCGCCGCCAGCCCAACCGGAACAGTCCGAGCCGGAGCCGGAGCCGGAGCCCGAGCCCGAGCCCGAGCCCGAGTCCGAGGCTGAACCGGAGTCTCAGCAGCCGCTCGATTTGCGCGTCCAGACGCGACGCGAATACTCACCACCGGTTATCGCGCCCGAGGAGATCGGTCGAGGTTCTCTCCCGGCCGCTCCAGTCCCTCCTCCAACCTCTGCCCCCGAGGTTAAGGAACCAGGCAATAGCCCAGCAACCCGGACTCCACAAACCCCCCCGCCGCCACCACCGCACATGGCCTACCCGAGACCAATTCATCCTCTCTTCCTCGAGTCTATTTACCGAAAACCTTCGAATCCTTTCCCCAGCTTCCCGAGCGAGCATCGGCTCCTGCAGCCCCTGCCCTCCTATGGACCGTCGCGCGGGCTACCCTTTTTCGGGCCCCTGATGAACGGCCTCGGCGGACCGCGACCCAGCGGTTACGACGTACTCTCGAGACCGGGTCTCGGAGGCTTTCCCGGAGTCAAGCCCTTCCAGGACCCGCTAATGGGCCAACAACCACCAAGTATTGGCGGCCCGTTCGGAGCCCATGGTAAAATCAAGGACCGCTACTCCTGCAAGTTCTGCGGCAAAAATTTCCCGCGCTCGGCCAACCTTACGCGCCACCTGCGCACCCACACGGGCGAGCAGCCCTACAAGTGCAAGTACTGCGAGAGGAGCTTCAGCATCTCTAGTAACCTGCAGCGCCACGTGCGCAACATCCACGACAAGCAACGGCCGTTCAAGTGCCCGATGTGCGAGCGCTGCTTCGGCCAGCAGACGAACCTCGACAGGCACCTGAAGAAGCACGAGGCCGACGACGGGAGCGGCGTCGTCTCCGTCGCCGACTCGGCCGACAGCAGCAACGAGAACGACCGCGAGGAGACCGCCACCTACTTCGACGAGATACGCTCGTTTATGGGGAAGGTCACCTACGGGGGCGATGGCTCGTACCTCGCGCCCCACCACCCGGCCTACCTGCCGAGCAGACTGCGGGAGGTTCACGGGGCGCGCGATCTCGTCGCCGATCCCGTTGGGCCCAAGGCCAAATACGAGGAGGACGAGGACAGCGAGGACGGGGCCGCACTTTCGCCACTGGAGCAGCCGGAGCTCGGCCTCTCGTCAAAGGACTCCTCGCCGGCGCAGTTCGACATGAAGCTCGGGACGAAGCGTGAACTCCTAAACAACAACACCGCCGAACCCGTCATCGAGATATCGACATAG
Protein Sequence
MGCPVQVPVSRLRGTRAPELEHRNYYCLSRRVHSSQHSGASHADEDREEDEDVEIRCTVCDKPFQDIEVLNNHLVICHRYPAREHCCSSCPSGYAWRPLLVRHRAIVHGDIRKYPCENCSKPDDPQVFTDPSNLQRHIRAQHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKSYTQFSNLCRHKRMHAKCRMQITCVKCSAQFSTVTSLSKHKRFCDSTPPAPAPVPGMSQPQPQHNPFLFPRQPLPFYPPSLIGHYSASLFRGAGNLLGLPLLFPPKTTEEPERGPRSGPPAPPPAAPPAPSSSKVSASPATAEEATSSLRPSPARPPPAQPEQSEPEPEPEPEPEPEPESEAEPESQQPLDLRVQTRREYSPPVIAPEEIGRGSLPAAPVPPPTSAPEVKEPGNSPATRTPQTPPPPPPHMAYPRPIHPLFLESIYRKPSNPFPSFPSEHRLLQPLPSYGPSRGLPFFGPLMNGLGGPRPSGYDVLSRPGLGGFPGVKPFQDPLMGQQPPSIGGPFGAHGKIKDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHDKQRPFKCPMCERCFGQQTNLDRHLKKHEADDGSGVVSVADSADSSNENDREETATYFDEIRSFMGKVTYGGDGSYLAPHHPAYLPSRLREVHGARDLVADPVGPKAKYEEDEDSEDGAALSPLEQPELGLSSKDSSPAQFDMKLGTKRELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00708109;
90% Identity
-
80% Identity
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