Basic Information

Insect: Ceratosolen fusciceps
Gene Symbol: Prdm15
Assembly: GCA_018883505.1
Location: RCIC01000017.1:3788285-3791405[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 3.5e-05 0.0036 17.8 2.3 2 23 469 491 468 491 0.95

2 7 2.5e-07 2.6e-05 24.5 0.8 1 23 502 524 502 524 0.98

3 7 1.6e-05 0.0017 18.9 1.5 1 23 530 552 530 552 0.97

4 7 6e-05 0.0061 17.1 0.4 3 23 561 581 559 581 0.92

5 7 0.00013 0.014 16.0 4.2 1 23 589 611 589 611 0.97

6 7 1.5e-07 1.6e-05 25.2 0.3 1 23 617 639 617 639 0.97

7 7 3.9e-06 0.00039 20.8 0.7 2 23 650 672 649 672 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	3.5e-05	0.0036	17.8	2.3	2	23	469	491	468	491	0.95
2	7	2.5e-07	2.6e-05	24.5	0.8	1	23	502	524	502	524	0.98
3	7	1.6e-05	0.0017	18.9	1.5	1	23	530	552	530	552	0.97
4	7	6e-05	0.0061	17.1	0.4	3	23	561	581	559	581	0.92
5	7	0.00013	0.014	16.0	4.2	1	23	589	611	589	611	0.97
6	7	1.5e-07	1.6e-05	25.2	0.3	1	23	617	639	617	639	0.97
7	7	3.9e-06	0.00039	20.8	0.7	2	23	650	672	649	672	0.95

Sequence Information

Coding Sequence: ATGGACGATAGCAGCAGCGTTACCGAAATTTTAGAGGAATCTGTGGACGAGCAAGAAATTATTGTAGAACAGGAGGGAGAGTGCGAGGAGGCTGAAATAGAAGAAATTATTGAAATCATAGAGGAAATCGAGGAGGTTGACGATGACTTGGAGCAAATCGAAACCATCGACGACGAGGATGACGAGCCACTTCCCCAAGTCGAGAAAATTAAGAAAAAAGAGCTTTCAGGAAAAAGTAACGGCCTACATGAATCTCCGGAGAACCTCGATGACTATGACGATAAGGAAGTTGTATATATTGGTAGTAGCGAGAAGAGCAGGAGCAGTCGAGCAGAGAAGCCGAGCAGCCATATATGCTACGACGCCTCGGTCGACTGGGAGGACGAGGAGTACGAGCAGGAACAGCAGAACTCTGTGGAGAACGCCGAGCTCTCGGCAGCGAATTCCGGTGACATGAGCGATTACGGGAGTTATAACAACGGAGTGGTGAGTGCCATGGAGGTGGTGAAGCCAGAGGACCAGGAGGACGTTAGAACGGAAATCTCGAGGACACAGCAGATGAATTACGAGGAGAGTGCGAGTCAAGAAGTGATCAGTGTCGATACGGATGACAACAACGAGCAGGAAATCGTCGAGAGTTCGGAAAATAACTTGGTTTATACGGTCCTTGGCTCTAAGAAAGCGATGAAGTCGGGGGAGGAGAATAGATCGGATGTAGAATATGTCGAGATCCAGAGGTATAGGGAGGATAATATGACGGAGGACGCGACGGTTTATTACGCCGTCAATGACGGCGACGGTTCCTACGTCCTGACGACAGTCGAGGACGAGGAGCAGGAGCAGTACCAGTACGTGAACGAGGAGCCGATGGAGCAGGATAACCAAGACTGGGAGGAGGAGGAGTCCAGCCAAATAGAGGCGGGGGAGGACCAGCAAGGTCAGATCGATCAGGAACAAGATCCGGATCAGGATCATGAACAAGAGCAGGAGCAGGAACAGGAACAGGAGCAAGAGCAGGGTCAAGAGCAGGAGCAGGAGCAGGAGCAGATCTACCTGCACGAGGACACGGACGGGCAGCTGTATTTCAAGAACGAGCACGGTCAGCTCCAGCCGGTGTACATGACCGCGGACGGCAACTACGCCATCGCTGAGAACAGTAGCGACGAGATGGAGAGCCAAGGTGGAGACGGGTCGAATCAAGTGCTGAGGGAGGAGGAGCCCGAGCCGGACCAATACATATTGCCCGATCACGTGGAGATGAAGCAATTCAACTCGAAGAAGATGGAGCAGCAGCACGCGGAGGTGGATAACGACGATAGCACCGTCACCATATCCTTGATAATATCGGAGGACGAGAACGGCCAGAAGCGTACCCAGGTCATAATTCCGACACCTGCCGAGTCCAAGTGCGACATCTGCAACAAGAGCTTCAAGACCTCCCTGCAGCTGCTCAAGCACAATCGGCTGAAACACGCCAAGGAGGAGGACATTACAACGAGGAACTTTCCCTGCGACATGTGCCCCAAAAGATTTTCCGACCAGAACTCGTTGGCTCGCCACCGCAAGACCCACACGGAGAGCCGACTCTTTCAGTGTCTCGAATGCCACAAGTCCTTCCCGACGGCGAATACCCTCCGGGAGCACCTGTCCCTGCACAACCCGGACTCGCTGCCGCTCCCCTGCATCTACTGCGGCCGGCGCTTTTCCGACAAGGTCAGCCTCACCAAGCACGAGCAGTCGCACCTCGCCGGCGAGAAGCGCTCCCACGTCTGCGACATTTGCCAAAAGTGCTTCTCGAACGTCACCGACCTCAATATCCACAAGAAGTACCACGACCCGGACAGGAAGTTCGACTGCGAGGTCTGCGGCCGGGAGTTCAATCGTTTAAACAACCTCCAGCGTCACATGATGGTCCATCAGCAGCAAGAGACGAACGAGGAGATCCTGTCGTGCAACGTTTGCGGTATAACGTACAAGTTTTCGAGCTCCCTCACGAGACACATGGTCACGAGGCACATGAACCCGGAGAAGCTGCGACAGCAGGCCGAGGAGCAGAGACGGAAACGCGAGAACAACTACCGCCGCTACCTGGAGAACCGGAAAACCTTCGAGAACCAGCAGCCGAAGCGCCCTTATCGGCGCTCGATGGGCAAACTCATGGACGACAAGGACGACGAGGCCGACTGCTTCGAGGACTCGCAATATAATGACTAG
Protein Sequence: MDDSSSVTEILEESVDEQEIIVEQEGECEEAEIEEIIEIIEEIEEVDDDLEQIETIDDEDDEPLPQVEKIKKKELSGKSNGLHESPENLDDYDDKEVVYIGSSEKSRSSRAEKPSSHICYDASVDWEDEEYEQEQQNSVENAELSAANSGDMSDYGSYNNGVVSAMEVVKPEDQEDVRTEISRTQQMNYEESASQEVISVDTDDNNEQEIVESSENNLVYTVLGSKKAMKSGEENRSDVEYVEIQRYREDNMTEDATVYYAVNDGDGSYVLTTVEDEEQEQYQYVNEEPMEQDNQDWEEEESSQIEAGEDQQGQIDQEQDPDQDHEQEQEQEQEQEQEQGQEQEQEQEQIYLHEDTDGQLYFKNEHGQLQPVYMTADGNYAIAENSSDEMESQGGDGSNQVLREEEPEPDQYILPDHVEMKQFNSKKMEQQHAEVDNDDSTVTISLIISEDENGQKRTQVIIPTPAESKCDICNKSFKTSLQLLKHNRLKHAKEEDITTRNFPCDMCPKRFSDQNSLARHRKTHTESRLFQCLECHKSFPTANTLREHLSLHNPDSLPLPCIYCGRRFSDKVSLTKHEQSHLAGEKRSHVCDICQKCFSNVTDLNIHKKYHDPDRKFDCEVCGREFNRLNNLQRHMMVHQQQETNEEILSCNVCGITYKFSSSLTRHMVTRHMNPEKLRQQAEEQRRKRENNYRRYLENRKTFENQQPKRPYRRSMGKLMDDKDDEADCFEDSQYND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -