Cfus013802.1
Basic Information
- Insect
- Ceratosolen fusciceps
- Gene Symbol
- bab2_1
- Assembly
- GCA_018883505.1
- Location
- RCIC01000006.1:2056031-2058814[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-12 1.9e-08 34.0 0.1 1 38 322 360 322 364 0.91
Sequence Information
- Coding Sequence
- ATGAATACCGCAGCACAGCAGTACTGCCTAAGGTGGAACAATCACAGTTCCAATTTTATTACAGTATTTGAGCAGCTTTTGAGGTCCGAAGCTTTCACAGATGTCACTGTCTCAGTACAAGATGGAACTTCTATCAAGTGCCATAAAATGGTCCTGGCTGCATGTTCATCCTATTTCCAGGATCTATTCATTAAGAATCCTTGCGAGCATCCAATCATTATTCTCAGCGATGTTAAGTATTGCGAAATTAAGGCAATACTTGATTACATGTACAAAGGGGAGGTGAACGTTGCCCAAGATCAGCTTGCTGGTTTGCTAAAAGTTGCTGCCTTCTTAAAGGTAAAGGGTCTTGTTGAAGATAGTGAATCAAATAACAGAAGGGAAGCAGAACCTTCGATGTCTCCATCTCCAGTCATTACAACAAGTACCATGAGCAATGTTGCACATAGCAGTGGCTACATATCCCCACCTCATATTCCCTCCTCTACCTTTATCCCTTATGGTAAATCTCCTGTAGAAAGAAATCACAATCACTTGCCATTGTGGGCTGCTTTCTCTGGACTTCCTATGCCTCAGCATCCAATATCTGGACACCAGCCTCCACCACGTAGTCAGCACTCCATTCTTGGCAGTTCTTATGAGAACTCATCCGAGAGTTCTCCCTTAAGCAGAAAAAAGCTTTCCAGCTTGATGGCAAATCGCGACACGCCCATCTTAAGGAATGTTCTTGGCCAAGGACAAGCTGATAGTTCTCAAGGAATGGCCACCGTTCATCAGGATAGGCAGGATGCATCATTCTGTTCAAACAGCAATGGATCAGCCCATGATTCAGATAGACGGAATAGTGCAGAGCTTTCAGAATCCATGATCGATGAAGATGAGAAACAAATTTCTCCTCAGAATTATCCAGTTGGAAACAAATCAGGCGGACCGAAGCCCGAGTGGAAGCGCTACAAGCAGTACACCCGGGAGCACATAATGGACGCAATGAGCGCAGTCCGCAATAAGGAGATGTCGGCCTTGCAGGCTGCGAGGAAGTACGGAGTGCCCTCCCGCACCCTCTACGACAAGCTGAAGAAGGCGGGTATCCTGCCCTCGCGGGGCGCCGCCGTCCAGAGGCGCGAGTCCACCCATTGTAGTAGCGCCCGCTTCCCCTACGCGAGTAGCATCAACGGCAGCGTCTACGGGAGCGGAGGTACCGGGGGCGTTGTTCTCTCCGAGAGCGAGAGCGAGACAAACGGACCCGGAGGCTGTACGAGCGAGGCCTCCTTTGCCTCGGCCCTGGCCATGGACATGTCCACGCGGAGCCCGAGTCCCACCCACAATTCCGGAAACGCAGCGGCTGATCTCGACGACCAGGTCGAGGATCTCTCCCTCGGTCGCGGGCACCAGCACGCCCCTCATGAGGACGATAACGTCAACGACTCCGATGGCTCGAACCGCGTCTGA
- Protein Sequence
- MNTAAQQYCLRWNNHSSNFITVFEQLLRSEAFTDVTVSVQDGTSIKCHKMVLAACSSYFQDLFIKNPCEHPIIILSDVKYCEIKAILDYMYKGEVNVAQDQLAGLLKVAAFLKVKGLVEDSESNNRREAEPSMSPSPVITTSTMSNVAHSSGYISPPHIPSSTFIPYGKSPVERNHNHLPLWAAFSGLPMPQHPISGHQPPPRSQHSILGSSYENSSESSPLSRKKLSSLMANRDTPILRNVLGQGQADSSQGMATVHQDRQDASFCSNSNGSAHDSDRRNSAELSESMIDEDEKQISPQNYPVGNKSGGPKPEWKRYKQYTREHIMDAMSAVRNKEMSALQAARKYGVPSRTLYDKLKKAGILPSRGAAVQRRESTHCSSARFPYASSINGSVYGSGGTGGVVLSESESETNGPGGCTSEASFASALAMDMSTRSPSPTHNSGNAAADLDDQVEDLSLGRGHQHAPHEDDNVNDSDGSNRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464075;
- 90% Identity
- iTF_00305114; iTF_00305712; iTF_00305572;
- 80% Identity
- iTF_00305114;