Basic Information

Gene Symbol
KDM5A
Assembly
GCA_018883505.1
Location
RCIC01000045.1:852621-866303[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.8e-25 5e-22 78.2 0.0 2 89 122 205 121 205 0.94
2 3 3.4 9.5e+03 -2.8 0.0 44 74 999 1029 967 1034 0.65
3 3 3.4 9.5e+03 -2.8 0.0 50 64 1087 1101 1082 1113 0.76

Sequence Information

Coding Sequence
ATGGTTTCGAAACTACACGGGGGAAACAACAGATATCAGTGCTCCGGGCCGTTTATCGACAGCCTCGGGGCGAGCAGGCGGGCCACGGAGAATTCGGCGATGGGACAACGCGAGGACTTTGAGTTCCTTATACCGCCCGAAGCCCCGCGAGAACGAGCCGCCGAGTGCTTCGTGACGACGATGGGCTACGGTGGCGGTGGCTATGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTGGCTGTAGCGGTGCCGTCTGGTGCCGTCTGAACTGGCAGCCACCATTTGCTGTAGATGTGGATAAATTTAAATTTGTTCCGAGAATACAGAGATTAAATGAGTTGGAGGCAAAAACTAGAATTAAACTTAATTTTTTGGATCAAATAGCAAAATTTTGGGAACTTCAAGGATCTTCATTAAAAATCCCTCTAGTTGAACGTAAAGCATTGGATTTATATTCATTACACAGAATCGTCACAGATGAAGGTGGAATCGAGAATGTAACAAAAGAAAGAAGATGGGCAAAAATAGCTAATAAATTGGGCTATCCTTCTGGACGCAGCGTTGGAAGTATTCTCAAAAGTCATTATGAAAGAATTTTATATCCATTTGATGTCTTCAAGCAAGGGAAAACATTAGCCGACATAAAAATTGAACCAGACAGTGATGCAAATGAAAAGAAAGACAGAGATTACAAACCACATGGAATTATATCGCGACAACAAATTAAACCGCCGCAAGAAAAGTTTTCTCGTCGATCTAAACGTTTTTCTGGACAAGATGAAAAACAAAATGGGTGTCCATCGACTATTAAACAAGAAGATTGTAAAGAAGAAAATGATATTGAGTGTAAAAACAGCACTAAAGGAAAAAATTTTATTGAAACAAAAGATAACATAAAAAATAAAAGTTTAAATGATTCAAAGGATAATATTAAAGGTAAAGCTTTATTAGAAGCAAAGGATATTATTAAGACTAGAGGTGCTGCAGCAGAAAAAGATAAGGAAAATAGTAAAGAGCTAAAGAAATTACAATTTTATGGAGCTGGTCCAAAAATGGCTGGCTTTAATACCAAAGAAACACACAAGAAATCTAATAAAACTAGAGGTGTAAAGCTAGTCTACGAATTTGATCCTCTTGCTAAATACATATGTCATAATTGTGGAAAAGGAGACAATGAAGAAAATATGTTATTATGTGACGGATGTGATGACAGTTATCATACATTTTGTTTGTTGCCCCCACTAACAGAAATTCCAAAAGGAGATTGGCGATGCCCGAAATGCGTCGCCGAGGAAGTGTCAAAGCCAATGGAAGCTTTTGGATTTGAGCAAGCACAAAGAGAATATACTTTACAACAATTCGGAGAGATGGCGGATCAATTTAAGAGCGATTACTTCAACATGCCCGTACATATGGTACCCACTGAGCTTGTAGAAAAAGAGTTCTGGAGAATAGTGTCATCTATTGATGAAGATGTCACTGTAGAATATGGAGCTGACTTACATACAATGGATCATGGATCTGGTTTTCCAACAAAGACAAGCGTCAATCTTTTTACCTGTGATCAGGAATATGCAGAATCATCGTGGAACTTAAATAATTTACCAGTATTACGTGGAAGCGTTCTTGGTCATATAAACGCAGATATTAGTGGAATGAAAGTTCCTTGGATGTATGTGGGAATGTGTTTTGCAACATTTTGTTGGCATAACGAAGATCATTGGAGTTATTCTATAAATTATTTGCATTGGGGCGAACCAAAAACATGGTATGGTGTGCCTGGTTCTGAAGCTGAAAAGTTTGAACGATCTATGAAATCTGCTGCACCGGAACTCTTTCAAAGCCAACCAGATTTACTTCACCAATTAGTAACAATTATGAATCCTAACATTCTTACAAGTGAAGGTGTCCCAGTATTTAGAACGGATCAACATGCTGGTGAATTTGTTGTAACCTTTCCGAGAGCCTATCATGCAGGTTTCAATCAAGGATATAATTTTGCTGAAGCTGTGAACTTCGCCCCCGCGGACTGGATACAAATCGGCAGAGATTGCATTGCCCATTATTCGAATCTAAGGCGCTTTTGTGTTTTTTCCCATGATGAGCTGGTTTGCAAAATGTCTTTGGAACCAGATAGCTTAGACATCGGAATAGCGACTGCGACTTATCATGACATGCTAACAATGGTCGACGATGAAAAGAAACTGAGAAAAAACTTATTAGAATGGGGAGTTACCGAGGCAGAACGAGAAGCTTTTGAGCTTCTACCTGACGACGAAAGACAATGCGAGGCATGTAAGACTACATGCTTTTTAAGCGCAGTGACCTGCTTGTGCCACAAATCGCAACTTGTTTGTTTGAGGCATTTTACAGACCTCTGTGAATGTCCTCCTGAAAGGCATACGTTACGATATAGATACACCTTAGACGAGCTTCCAATTATGTTGCAAAAGTTGAAATTAAAGGCAGAGTCTTTTGATTCGTGGGCAAGTAAGGTTAAAGAAGCTATGGATCCAAAAGGAGAGAAAATTGAACTAAATGAATTGAAGGAATTATTAGACGAAGCCGAAATTAAAAAATTTCCAGAAAGTGAATTACTTACTGCATTAACAACTGCTGTACAGGATGCTGAAAAATGTGCCAGTGTTGCAAGACAGTTGTTGAGTAATAAACAAAGAACGAGGACAAGACAATCTGTTGATGCGAAGTTTAAGCTCACAGTTGAAGAGCTCACATTATTTCATCAAGAAATTACAAATCTTTGTTGTGAACTTAAAGAAGCCGATGGCGTTAAATACATTTTAGATCAAGTAATTAAATTTCAAAGGGATGCTGAAGAATTAGAAATACAAGAGATTGATTGTAATATTGAAAAATTTGAAAAGTGTATTGAATATGGTGATTCAATTTGTATAGAATTACCGCAACTTTCGAAGTTAAAACAGAAACTACAACAATTGCGTTGGTTAGATGAAGTTAAATCAATTCAAGAAGAATCAAAATCGGTGACCAGGCAAAATTTAGGAAAACTTATAGAAGAAGGAATGAATATTCCTCCACACTCTACTGTAGAAAATGCTTTAGCTCAGCTTCAAGCTTTAATGATTAGTATTGATAATTGGGAAGATAAAGCGAAACTTTATATTCAAGCCTCTAAAAATAGACAAACAATTTCATCGGTCGAGGAACTTATTGTAGAAGCAGATAGTATTGATGCATACCTACCTGGATTGAGTAATCTTAAGGACGTTTTAAATAGAGCTAAAAATTGGACCAAAGTTGTCGAGGAAGTACAGGCTCGAGAAAATTTCCCATATTATGATACTTTAGATGAATTATTGCGTAAAGGTAGAACTATTCCACTGCATCTTTCTGCTTTACCTGTACTCGAATCAACTTTGGCTCAAGCAAAAATTTGGAAAGAAAGAACAGCTAGAACATTCCTACGAAAAAATTCACATTATACATTAATGGAAGCACTTTCACCTAGAATTGGAGTTGGATTACATGCAATGAAGACTCGTAAAAATAATAAAGGAGAAGATTCCATCGGAGCTGTATATGTTTGTGATACTAAATTGGATGATTCTAATGATTCAGCTACTATCGTAGCTGCCTTTAAATTAGCAGAACAACGTGAAATGGAAGCTATGAAAAATTTAAGAGAAAGAAATATTGGTAAAATGGAAATTGATGATTCGAGGTTTTGTGTTTGTCGAAGATCAAAGTTCGGTCAGATGCTACGTTGCGAGTTATGCAAAGATTGGTTTCATACAAACTGTGTTCCTGTTCCAAGAACTCCTTATAAAAGCAAACAAAGAAGTTCGAGGGTGACTAAATTCTTGTGTCCATGCTGCCTACGTTCTCGAAGACCACGTTTAGAAACCATATTATCACTTTTAGTAAGCCTTCAGAAAATTCCCGCTCGTTTACCAGAGGGTGAAGCTCTACAATGTTTAACAGAACGTGCAATGAATTGGCAGGATCGAGCGAGGCAAGCTTTATCCGCTGAAGAAGTATCTTCAGTATTAGCCAAACTTAGTATTTTATCACAAAAAATGACAGAGGCTGCGGCTAGAGAGAAAACTGAAAAAATTATAAGCACAGAACTAAAAAAGGCAGCAAATAATCCGGAACTACATCAAAGAGTTCAAGTTATTGCTTCTATGAGTGGTGTACATTCTGATGATAGTGTAATAACATCAAAGTTTCCATCGAAATCGTCATCTGGCGATGATAAAGATAATAAGGTAATAACGTTATCGAGCAATACAACTACACATTTAGAGGAATTGATGATGGAAGGAGATCTTTTAGAGGTCGCTTTAGACGAAACTGAACATATTTGGCGAATTCTTAGTCAGACATGCACACCGTCAAAAAGCGTACGTAAATATGCACCACTGGATCAATCGTTATCGATTACTGAATCTAAAGATCTTAAAAAACAGCCCCAACAGAGAGGTCGGAAACGAAAGTCTGATGAATTTGAAATGCTAAAAAAATTTGGTCGTCAAAGAATAGATGATAAGCCTATAGTGAAACGTAAAGGATTGAACAAAGAAACGAAATCATCAGCGACAATTGGATCGATGAAACGAGGGCCGCGCAAGCTGAAGCGCAAGGACAGTGATGAAGGGTCTAAGAGAAGAACTGGAAATAGGAAAAAGACTAAGCAGGACACGTCTGACGAAGAAGAAGATTGTGCCGCCGTCAACTGCTTAAGACCTAACGGGCGTGAAGTTGACTGGGTACAGTGCGACGGCGGATGTAATGGTTGGTTTCATATGCACTGCGTTGGTTTGGATCGCACAGAGCTCGCCGAAGAAGATGATTATATTTGCAGTAATTGCAGTGAAGCAGATGTAAATTCCTCGAGTCAACAGGACGTCCATTCGTCGCAGTCGTCGCATACCGAGCTCACCGACAATGAAGGTGAATTAGAAGAGGACCTACAAGAAACGGTCAGCATTACTAGAATCTATTAA
Protein Sequence
MVSKLHGGNNRYQCSGPFIDSLGASRRATENSAMGQREDFEFLIPPEAPRERAAECFVTTMGYGGGGYGCGCGCGCGCGCGCSGAVWCRLNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIENVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLADIKIEPDSDANEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCPSTIKQEDCKEENDIECKNSTKGKNFIETKDNIKNKSLNDSKDNIKGKALLEAKDIIKTRGAAAEKDKENSKELKKLQFYGAGPKMAGFNTKETHKKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFERSMKSAAPELFQSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWIQIGRDCIAHYSNLRRFCVFSHDELVCKMSLEPDSLDIGIATATYHDMLTMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCLCHKSQLVCLRHFTDLCECPPERHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNELKELLDEAEIKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVDAKFKLTVEELTLFHQEITNLCCELKEADGVKYILDQVIKFQRDAEELEIQEIDCNIEKFEKCIEYGDSICIELPQLSKLKQKLQQLRWLDEVKSIQEESKSVTRQNLGKLIEEGMNIPPHSTVENALAQLQALMISIDNWEDKAKLYIQASKNRQTISSVEELIVEADSIDAYLPGLSNLKDVLNRAKNWTKVVEEVQARENFPYYDTLDELLRKGRTIPLHLSALPVLESTLAQAKIWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKTRKNNKGEDSIGAVYVCDTKLDDSNDSATIVAAFKLAEQREMEAMKNLRERNIGKMEIDDSRFCVCRRSKFGQMLRCELCKDWFHTNCVPVPRTPYKSKQRSSRVTKFLCPCCLRSRRPRLETILSLLVSLQKIPARLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLAKLSILSQKMTEAAAREKTEKIISTELKKAANNPELHQRVQVIASMSGVHSDDSVITSKFPSKSSSGDDKDNKVITLSSNTTTHLEELMMEGDLLEVALDETEHIWRILSQTCTPSKSVRKYAPLDQSLSITESKDLKKQPQQRGRKRKSDEFEMLKKFGRQRIDDKPIVKRKGLNKETKSSATIGSMKRGPRKLKRKDSDEGSKRRTGNRKKTKQDTSDEEEDCAAVNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCSEADVNSSSQQDVHSSQSSHTELTDNEGELEEDLQETVSITRIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
-
80% Identity
-