Basic Information

Gene Symbol
XBP1
Assembly
GCA_018883505.1
Location
RCIC01000017.1:3132061-3133411[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.2e-14 9.4e-11 41.7 11.1 2 61 79 138 79 142 0.95
2 2 3 3.1e+03 -1.6 0.3 18 30 256 268 240 271 0.54

Sequence Information

Coding Sequence
ATGAGCCCGATCAAGAGCCTCGTCATAACCTTGCCTACGGGTAAAGGAGGAGTGGGAGGAGTTGGCTGCGGCGGCTGCGGAGGCGGGGGCGGCGGCGGCTGCTGCGGCCCCGTCCTCGTCGACGGGATCAAGCTCGAGGCCGACGGCTTGATTTTCAATCAGGAGTCCTCGCACGAGGACGCGGTCATCCTCGCTGCTCGCGGTAAAAAACGCAGGCTCGATCATCTCACGTGGGAGGAGAAACTCCAGAGGAAGAAGCTTAAGAACAGAGTGGCCGCGCAGACGTCCAGAGATCGTAAAAAGGCCAAGTTGGACGAATTGGAGGAAACGGTGAGGCTTCTTAAAGAGAAGAACGATATCCTGATCGATGAGTGCTCGATGCTGAGGACACAGAATGAACTGCTCGTCTCTGAAACTAAGATGCTTAAGCGGGATAAGGAGTCGAGCGGCGAGGGGTCAGCGAAACAAGTGTGCTCAATGTGTCAGGCTTCTGTCGGCTGTACTGTACCAACGCTGGGATCAGCAGTATCCCCCCTTAACCCTCTGCAGCAGGGTGGAACAGCACAATCGGCACAATCTCTGATGCAGAAGCCAAGCACTACAATACTAATGAAGATCCTGACTCTCTATCTCCTCTCGAAGATCTATTTGATGGATTCCAAGCAGACGATTACATCGACAGACTCGAAGAGCTTGCAGAAAGCCTTTTGCGAGAGGTTACCTCAGAAGTGGAAGCAAGCACTACTCAATCAAATGAACAGAGTCCAGTCGAGGAAGAAAGTGCCAGCGAAAAATTTGACCATTCAGAAGAAATGGTGGGGCAGGCATCAGGTTATGTGGAAGCCGGTACACCTTGTAGAGGCGTAA
Protein Sequence
MSPIKSLVITLPTGKGGVGGVGCGGCGGGGGGGCCGPVLVDGIKLEADGLIFNQESSHEDAVILAARGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRLLKEKNDILIDECSMLRTQNELLVSETKMLKRDKESSGEGSAKQVCSMCQASVGCTVPTLGSAVSPLNPLQQGGTAQSAQSLMQKPSTTILMKILTLYLLSKIYLMDSKQTITSTDSKSLQKAFCERLPQKWKQALLNQMNRVQSRKKVPAKNLTIQKKWWGRHQVMWKPVHLVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-