Basic Information

Insect: Ceratosolen corneri
Gene Symbol: stc
Assembly: GCA_030522565.1
Location: JAPYYT010003202.1:3052-9369[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.78 3.2e+04 -3.8 1.6 15 19 124 128 123 128 0.81

2 13 0.027 1.1e+03 0.9 0.4 4 10 157 163 156 163 0.95

3 13 1.1e-07 0.0044 18.2 12.8 4 19 174 189 172 189 0.93

4 13 0.63 2.6e+04 -3.5 0.9 5 10 214 219 214 219 0.91

5 13 2.6e-08 0.0011 20.1 16.4 1 18 225 242 225 243 0.98

6 13 0.39 1.6e+04 -2.8 0.7 6 10 271 275 270 275 0.87

7 13 7.3e-08 0.003 18.7 13.6 1 19 281 299 281 299 0.95

8 13 0.00038 16 6.8 9.5 3 18 345 360 339 361 0.83

9 13 0.0058 2.4e+02 3.0 11.5 1 11 401 411 401 423 0.90

10 13 6.7e-10 2.8e-05 25.2 14.2 1 19 428 446 428 446 0.98

11 13 1 4.2e+04 -11.7 16.8 10 19 493 503 474 503 0.84

12 13 7.3e-08 0.003 18.7 10.5 1 16 539 554 539 564 0.89

13 13 3.6e-05 1.5 10.1 12.7 3 19 572 590 571 590 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.78	3.2e+04	-3.8	1.6	15	19	124	128	123	128	0.81
2	13	0.027	1.1e+03	0.9	0.4	4	10	157	163	156	163	0.95
3	13	1.1e-07	0.0044	18.2	12.8	4	19	174	189	172	189	0.93
4	13	0.63	2.6e+04	-3.5	0.9	5	10	214	219	214	219	0.91
5	13	2.6e-08	0.0011	20.1	16.4	1	18	225	242	225	243	0.98
6	13	0.39	1.6e+04	-2.8	0.7	6	10	271	275	270	275	0.87
7	13	7.3e-08	0.003	18.7	13.6	1	19	281	299	281	299	0.95
8	13	0.00038	16	6.8	9.5	3	18	345	360	339	361	0.83
9	13	0.0058	2.4e+02	3.0	11.5	1	11	401	411	401	423	0.90
10	13	6.7e-10	2.8e-05	25.2	14.2	1	19	428	446	428	446	0.98
11	13	1	4.2e+04	-11.7	16.8	10	19	493	503	474	503	0.84
12	13	7.3e-08	0.003	18.7	10.5	1	16	539	554	539	564	0.89
13	13	3.6e-05	1.5	10.1	12.7	3	19	572	590	571	590	0.94

Sequence Information

Coding Sequence: atggcCACCTGGGATGGTTCATATCCAGAATCGGATGGATCAAATTATTATGTCAACTCAGACAAAAATCAAATACCAGTAACTATTCCAACATGGGACTATTACCTTTCTAATATTAACGACACATATGCACAAAATACAACTATTCCATACTTATTAAATACATCTATGtatgaaatagATGATGATGCAAGTCAAAGAGAAAGATTGACAGACCAATTAAATCGTGGTCAACTAGAGTGTTTGGTTTGCTGTGACTATATTCGACAGATTGATTATGTGTGGTCGTGTAAAAATTGCTATCACGTTTTGCACTTCAAATGTTTACAAAAGTGGGCGTTATCATCACAAGATGaAAATGGTTGGCGATGCCCAGCTTGCCAAAAGGTTACTTTAGGCATACCATCTTACTACGAATGTTTCTGTGGTAAAACTCAGATGCCAGATTGGAACCGACACGATATTGCGCATTCTTGTGGTGAAGTGTGCGGCCGGATACGAGTGGATTTAAATTGTGTTCATAAATGCACACTACTCTGCCATCCAGGGGCATGCCCACCCTGCTCAGCTATGGTTACCAAATCTTGTGGATGTGGTAAGATGTCTCAAACCCAGAAGTGTAGTACTGAACTGCTGCTTAAGTGCAATGATACCTGCGATAAACTTCTTAACTGTGGTATACATAAATGCAAAAACAAATGTCACCATGGCAGCTGCAAACCCTGTGATAAAATCATCAAGCAAGaatgtttttgtataaaatacagtCGTGAAGAAAAATGTGTTTTGAATTTATCTTCAATGTATTCGTGTCAAAACATTTGTGACAAGATATTAGAttgtaataatcataattgtaaagaaatttgtCACCCAGGTGAATGTGGATCATGTACTTTAAAGCCTGAGGCAATTACAAATTGTTGCTGTGGTAAAACTGTTTTATCTgttaaaagagaaaattgttTAGAACCAATTCCAATATGTGATAAAATCTGTGGAAAACAGTTAAAGTGTGGTCAGCCAAgtaATGCTCATACCTGCCTATTATACTGCCATGAGAATGAATGCCCTGAATGTGAACTATTTACAAAGGTAAAATGTCGATGCGGATACATGGATAAAGAAATCCCTTGCAACGAATTAATTACAAGGGCTGATGATGCCTGTTGCAAGAAAAAATGTACAAAGAAACGTTCCTGTGGTAAACATAAGTGTAATCAAATGTGTTGCATCGATATTGAACATATATGTCCTCTAccttgtttgaaatatttgagcTGTGGTAGGCACAAATGTGAACAAACTTGTCATGGAGGTAGATGTCGGCCTTGTTGGCGTAGTAGTTTCGACGAACTCTACTGTGAATGCGGTGCGGCCGTAATTTACCCTCCAGTGGCATGCGGCACACGTCGACCTGCTTGCGACAAGCCCTGTTCCCGAAATCATTCATGTCACCACGAAGTTCTTCACAACTGTCACAGTGATTCGAACTGCCCTCCATGCACTATTCTTACTCAGAAGTGGTGTTATGGCCAACACGAGCTACGCAAAGCTGTGCCATGTTATGTTAACGAAGTTTCTTGTGGATTATCATGTGGCAAGTCTATTTCTTGTGGTAAACACAAGTGCATTCAGATCTGTCACCCAGGTATCTGTGAAAAACCTGGATATGTGTGCATACAACCGTGTATAAACCAAAGGGAGATGTGCAATCATATATGCGGGGCACCTTGCCATGAAGGAAAGTGTCCTGACATACCTTGTAAAGAAACGGTCAAGGTTACTTGCCAATGTGGAAACCGAACTATGTCTCGTTTATGTGCAGAAAATGCCAAAGATTATCAACGGATAGCTAGCAAAATTCTAGCCAGCAAAATGGCAGACATGCAATTAGGGCACTCAATTGATCTTGAGGACGTATTTGGTCAAGGACCAAAGAAGCAGAACCAACTAAAAACTCTTGAGTGCAATGATGAATGTAAGATAATTGAGAGAAATCGACGTTTGACCCTTGGCCTTCAAATTGAAAATCCTGATCTATGTGGTAAACTAATGCCCAAATATAGCGAACACATGAGACAATGGGCCAAAAGAGATTCTGTTTTCTGTCAAATGGTGCATGATAAACTTACTGAGCTTGTACAATTAGCTAAAACTTCCAAGCAGAAATCTCGCAGCTATTCTTTCGAAAGCATGAACAGAGATAAAAGACACTTTGTGCATGAATTATGTGAACATTTTGGATGCGAAAGCCAGGCCTATGATCAAGAACCAAAACGTAACATTGTCGCGACTGCTGTAAAAGATAaaTGCTGGTTACCAAGTTATAGCTTGATGGAATTATTACAAAGAGAAAATGGACAACGAAAAGTACCAGGACCAATGCTGAATAAatcaaaaatgaatattattgatagaagtaatattttgcaattgaaCTCAAAAAAGAGTTTAAAATCTTTAGCTACAATATCAGTTTCACCATCAAAGTCTCCAGAACCCGAAAtagattactttaattataagggttga
Protein Sequence: MATWDGSYPESDGSNYYVNSDKNQIPVTIPTWDYYLSNINDTYAQNTTIPYLLNTSMYEIDDDASQRERLTDQLNRGQLECLVCCDYIRQIDYVWSCKNCYHVLHFKCLQKWALSSQDENGWRCPACQKVTLGIPSYYECFCGKTQMPDWNRHDIAHSCGEVCGRIRVDLNCVHKCTLLCHPGACPPCSAMVTKSCGCGKMSQTQKCSTELLLKCNDTCDKLLNCGIHKCKNKCHHGSCKPCDKIIKQECFCIKYSREEKCVLNLSSMYSCQNICDKILDCNNHNCKEICHPGECGSCTLKPEAITNCCCGKTVLSVKRENCLEPIPICDKICGKQLKCGQPSNAHTCLLYCHENECPECELFTKVKCRCGYMDKEIPCNELITRADDACCKKKCTKKRSCGKHKCNQMCCIDIEHICPLPCLKYLSCGRHKCEQTCHGGRCRPCWRSSFDELYCECGAAVIYPPVACGTRRPACDKPCSRNHSCHHEVLHNCHSDSNCPPCTILTQKWCYGQHELRKAVPCYVNEVSCGLSCGKSISCGKHKCIQICHPGICEKPGYVCIQPCINQREMCNHICGAPCHEGKCPDIPCKETVKVTCQCGNRTMSRLCAENAKDYQRIASKILASKMADMQLGHSIDLEDVFGQGPKKQNQLKTLECNDECKIIERNRRLTLGLQIENPDLCGKLMPKYSEHMRQWAKRDSVFCQMVHDKLTELVQLAKTSKQKSRSYSFESMNRDKRHFVHELCEHFGCESQAYDQEPKRNIVATAVKDKCWLPSYSLMELLQRENGQRKVPGPMLNKSKMNIIDRSNILQLNSKKSLKSLATISVSPSKSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -