Basic Information

Insect: Ceratosolen corneri
Gene Symbol: -
Assembly: GCA_030522565.1
Location: JAPYYT010000284.1:74443-94629[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0032 0.59 11.9 0.2 2 23 835 856 834 856 0.97

2 12 0.005 0.92 11.2 1.9 2 22 1005 1025 1004 1025 0.95

3 12 0.71 1.3e+02 4.5 0.2 3 23 1046 1066 1044 1066 0.96

4 12 0.55 1e+02 4.8 0.8 1 20 1144 1163 1144 1165 0.93

5 12 0.53 96 4.9 1.7 2 19 1190 1207 1189 1208 0.95

6 12 0.019 3.6 9.4 0.2 1 23 1233 1256 1233 1256 0.97

7 12 0.0091 1.7 10.4 0.3 1 23 1308 1330 1308 1330 0.97

8 12 0.0042 0.78 11.5 0.5 3 23 1632 1652 1630 1652 0.95

9 12 0.47 86 5.0 1.2 1 23 1978 2002 1978 2002 0.97

10 12 4.2 7.7e+02 2.0 4.3 2 23 2057 2079 2056 2079 0.92

11 12 0.0084 1.5 10.5 0.1 1 23 2089 2114 2089 2114 0.96

12 12 0.00019 0.034 15.7 1.0 1 23 2116 2138 2116 2138 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0032	0.59	11.9	0.2	2	23	835	856	834	856	0.97
2	12	0.005	0.92	11.2	1.9	2	22	1005	1025	1004	1025	0.95
3	12	0.71	1.3e+02	4.5	0.2	3	23	1046	1066	1044	1066	0.96
4	12	0.55	1e+02	4.8	0.8	1	20	1144	1163	1144	1165	0.93
5	12	0.53	96	4.9	1.7	2	19	1190	1207	1189	1208	0.95
6	12	0.019	3.6	9.4	0.2	1	23	1233	1256	1233	1256	0.97
7	12	0.0091	1.7	10.4	0.3	1	23	1308	1330	1308	1330	0.97
8	12	0.0042	0.78	11.5	0.5	3	23	1632	1652	1630	1652	0.95
9	12	0.47	86	5.0	1.2	1	23	1978	2002	1978	2002	0.97
10	12	4.2	7.7e+02	2.0	4.3	2	23	2057	2079	2056	2079	0.92
11	12	0.0084	1.5	10.5	0.1	1	23	2089	2114	2089	2114	0.96
12	12	0.00019	0.034	15.7	1.0	1	23	2116	2138	2116	2138	0.96

Sequence Information

Coding Sequence: ATGGCCTCGCAGCTAAATACACCGATGAAGCCGCGACTGTACAGTGTTTTCCTACTGGTAATCTCACATTCATCCGTTTGCGATTTCCAAGTTGCTGCGTATGAGAAGCCTCTGTGTAGTGATGATAATGAAGCCATTTTGTCCTGTCAAAGAATACAACCTTATTTGGGTAAAAATTATCCTAATTGCAGTAGAACATTACCATTTGCATATttagtgaataaaataaaaccgGAGAATGCACTAGAAACCAGCACAAAGTTACCTAATAATACGCTAAATTTAgatgaattaaaaaagaagtTGAACCAAAATGAAGATGCAAACATTCCAGAAAACTTAGAAAGTGCATTACTTaatgataatactaataatactgtTGATCTTGGTAATGGTATTTCTGATAAATCAGTACAAAATGGAGAATGGAAGTTTAGAAGAAAACGTCGTAACATTCAATCTGAAAATGCACAGCAGGCAGTAGAGGGATGTCCCAAGAAttGGAGATATTTATCTCCTTTAAACGTAAGTGAGCAAATAGCCAAAGATGATTTATCCAGCGGTAATGTATCGGATGTGACCTCCAATATGAGTTATAATAACGAACAACTGGGAATTATAACGAAAGTCGAAGACAAGCTTAACGAACAGATCGACACAAACATTAATGAATTTCCAATAAAACCTAGAACCAGATTGAGAAGAAGAGTACTAAGAAGAAGCTTCATAGAatcatctaatattttttacaataggaGAAGAAAGCGTCCTATCAATTATTTAGAGGACTACGGTGATTCAGATACAAATGAATCAACTTTATCTGCCTTGAAACAACAAGGAGCGCACTTGCAGAATCGACGACGGCCGACGTTGCGGGAACGCCAAAATCTCAAATTCTATGGCAGCCAAGAGATGGACGAGAGCGACATGGAAGTGGCGGAATTTACTTGCATtggtttaaaaaatagaattccGAGTAAAGAGGTCGACAGCGATAATGTGGACAATTCGAGCAATAGATTACAAATCCATGCAACTGGGGATTCGGACTCATTCAATCGTGATTCCCGATCTCGGACTACAAGCATCTCTGAGAATGTCGAGGACAGCCAGAGCATTCAGCCAGTTCACAAAATTCTGGGTTCAGACTTATCGAATAAGTTGAAAGAACAAACCCCCGATGAACACTCTCAAATTCACAATGACGAGAACAAGGATCAAGAAGCAGATGACTTTTCTATGAATTACATACAACTTAGGTCACGCAGTCGGCTTTTAACTACTGGTGGCCATcttaaaatcttgaaaaaaacCGAATTGACGCAAAAGGAGGAGCATACTTCTAGTCACAGTGTATGCCCAcctaatttcaatattgatgGTAGAAACGAGCGGATTTCCTCGACGTTTACAATTTCAAACAAGAGCAACGGCATCACTACGATCGGCAAGAAATTCAAACTATCCAATATAGATGAGTttcctattaataaaaaaaatacttcaagTATTTTATCGCGAAACGAAACGAAAGAGAATGCACGAATTAACAGGCATAGATCGATTACACCATCAAAGTCGCCAAAACAGCCCAAAAGCAACTTAATGGACAAACTCagtaattttgaattgaaattggaaCAGCCGAGCAGCATTAAGTGGACAAACAAAGAGGATGTGCCGTTTAACAATCTTAagGTTCAACTTATAAGATTGGAAacgatttgcaaaaattttgaGGATTATTCAGCTAGCGAAATCGAGTTGTTAACTAGCAAGTACATTGATATGTCGATGAATTCAAATTTTACCTGTGATACCTGGCATAATACAACGAATTATCATCGATCCGAAGGGCTCATTGAGAAGCTCGTTGAGGAAGTCGATAATTGTGACTACGTATCGGATGTTGAATTGCAAGAGGAAATTGAAGAGGCGACTACTACGGTTAGATCCGAAGATGTACACATGGAAGATAGCATTGATAAAGCAAAAGTAAAATCTGTAAAACccaatttaaaacaaattgaaaatgcgTTTTCATCGTTTACTACTTTGGAGTCGGCAATAGCGACCCTCGTAGATGCCGAGCCTGGTGAACCACGAAATTTCGGTGCTATTACTATATCGGAAATTTTGAAGAGTCCATCGAGTAGTGTAAAAGAGAAGGAGAAAGATAATACGATTAAGTTAAGCGACCAGACAATGGATGGTAAAAATCAGAGGCAGTTAACCTTGTCTGAACAGCTGTCATCGTCGGTGCACGATACGATTCTGGTAAATGGTACGACGATGTATGGTTGCCCTGTTCGTAATAGAATATTCGTTACTGAGAATTTATTGAGGCAACAAGCAGCTGCATGTTGTATTGACTCGGCCAATGCTAATACATCAAAGTCCACCAGAATTAAGCATAAAGTCCAAGTTCCTAGTGATTTATCCTCCAAAAAGCCAATACCAGCAAAATGTAAGAGGCAGGTTAGGTCCATAGAGAATCTTAAATGTACGATCTGCTCTGTAATATTCGATTCCAAAGAAGTGCTTTTCGATCATATTATGACGCACAGCGAGCAGGAATTGCAAGAGGCTTACAAAATGGCGAAAGCTAAAGCGAAGCAGCGACAAAGCGAAGGATCTACCAGCATGTCCGAAGAGTCGGATAAAGAAACGCAACAGACGACAGAAGATTCGCACGATAAAGAGGCACAGAATAAAACGAGTACAGAAAATAAGGGGAGGAAAAAAAGTACCGATAGTAGTAATCAAAGTAGCAGGTCGTCAATGGACGTTGAAGATTTAGTTTTTGACGATTCGTTAAAGACTCCATGTATCAGAAGTGGGCCAGTAACGGTAGATGCACAGCAACAGATAATAGAAATAGAGTGTAATGAAAGCCTTAGCAATGTCGACCAATTATCAACGAGCATGCAATGTTCTAAAACTGTAACGATATGTTCGTGTCACGCGCACGAAACTACGCCACAAGATCTTCAAATAGAGATGGTGCTGATGTGCAAGACATGCAACGTTGTTTTCCGTCGGCGCGACTGTTTCGAGGTACATTACAGGACGAGCCCCGAGTGTCGCCGACGACGTACCAACAACGAAGTGACAAAGATGCCCAAGCTCTTTTGCAGTGGATGCCCTTGTGTGTTGGATTCTCTTATGGACATGAGGGCGCATTTGGAAATGCACGCGAGGGAAAATTGCCAGGGAACTGTCacttttatatgcaatatatgcAAAGTCGCGTTCTTTGGCGTTGGCGGAATTTTTTATTCCCATTGGTTCAACCATACAAAGGCACCAAACTTTGTAGCTAGTCGATACTCTTTTCCCAAGCTGTCCGTGGTCTCGGTGGTGGAGGATTCGAATGTCGCCATAACGACGACCAAGAGTCAGGAAGGATTTTTCTACATTGCTGAGCACGTTTGTCGACAGTGCAGGTTGCCATTCAGTTCGGAGCCTGAGTTTATAAAGCACAAGGCCCATCCTTGTCAGCCGCAGCAGCCAACTCCACGTACTGATGGTCTAGATGGCAACCGCCTCCAGATGATAAAACTCATTTGTGATCTGTGCAAAAAGTACTACGTTAGCAAAGAGAACTTTGACAGGCACTGCAGCGAACGCAATCATCTCAAAACTCCAATAACGAAATTTTCTCGTCTGCCTATCAACGCGAACGAGCAGGCCTTCGTTTGTAGTCTTTGCCGTGCCGTTAGCAAATCCCTCGACGATCTTAAGGAACACTGGAAACGCATACACAGCCCCATAATGGAGCTCTATACCTGCAAAACTTGCAACATAGTTCCCTCGAACGATGTTACAAATTACACTTACGATAAGTTCGAAACACATTGTCGTATTGTTCATAAGAGCGAGGTCATTACGTGCCTCGTGTATTTTGTTACCGCAAGGTACGTTTGTAACATCTGCAGGTTCGGCTTCGAAACGGAAAAGTCGATGAAGGAGCATCAGGTTGTACACCAGAAGAGATCGTCTCAGAATAATAGCGCTAATGCATCGTTGGTTGGATTGCCAATGGAACAGCAAATGACGACCCTTTGGGTTGCTGACAAGCATGTAGCTCCCGATGGCGGCAGAAAAGTGCATCCTGTGTACGTGCACTATCCTGGTGTTAACAGCAAACGAGTGGTTCCAATATTACCAGcgCCACCGAAAAGCCAAAGTCAGCATTCGTCGCAGCCTCGCAATGCAAACAACGCGAAGAACAATCCGCCGAGCTCCTTCCCGAGCGCCGCCTCCAGCAGCACGAGCACCAGCTCGGTTCCCCATGGCTTAAGCTCCATGCTGCGCAATATGCTCGTCCAGAGGGCGCTTGATCAGCCACAGCCTCCCAAGCAAAACTATACCACGAATTCAAATGTCGAGACGATATTCATCGATTCGCGATCCAACAGCCCCTCGTCCGATCCCCCCGCGCCCAATGCGACCAACAAGTCCGGCACGACGAGTGGCAACGATACTGTAATCGCCTCAAAAAAGTCTTATATGACAATGGTGAATCCGAACTTCGAGTCGCTGTTAGGTACAAACAGTACTTTACAGGCAACCGATAACAATAACGACAGTAATCTCGACAAAGATAATTCCGGTGGTACCGCGACGCCGGTCAGTATGGACTCCTTGACTCCGCAGCCGTTCGAGGTGGTCCTCGTGACCGACGATCTAAGCGAAAACTCCAACTGCGAGTCACCAACTATGAATGATAGAAGCAGAATTTCTTCAGCGGATAAAGTATTGGACCTGGTAAATTCCACCTCTAATCAGCATCAGATGACAGAAGGTAATGAGGTCTCATCGGCAAAGTCTTCCAAGTTCCTACGTGTGCGTTCGATAGCCGAATTGCAgcatatgaaaattcatttgtgCTCTGTATGCGGTTTGAGCTTTGATACGCCACAAGCTTTGGATCAGCATTCCCGCCAGCATGAAATAACTGGCGAAATTAATCGAATGACGCCAGTACAGATGATCTCTCCAATGGTCGCACAGAGTAATAAAGAATCCAATGATTCACAAAATTTGCTACATTCATCACAAGCCAGTCAGAAGATGGCTTTATTGACACCTAATGGAAAAGTATTGCCAACATATGATCCATATAACAAATCCAATCCATCGGTTCTTTCCAATCAATTGTATCAACCACTGCAGCAACAACAATATCATCAGTATAAGCAGCAGCATAATCCCTCTTACTGGTTTGCATCTTGCAATGACACGTATAATGTTAATCAACCAAGCTTGCACTACAACGCATACAGTCGCCATCATCAGCAACCACACCAACAGCCACAACACCACCAGCCCCAACACCACCAGCCCCAACACCACCAGCCACTACACCACGAGCCACAGCACCCACAGTCACAGCACCTGCACTCGCAACACCATCAGCCACTACACCATCAGTCGCAACACCATCAGCAACTACAAAGCAAACAGTTGACGCATCAATCGAGCGCCGTACGACGACCTGTTAATCTAAATAATGCAAATGGCGCATACGTGTCCCGAGGTCCACCACCCGCATATCCAAGCACTTCCAATTCAATTGCGCCTAGTCGATCAAGTTCGATACAGTTGCCCGACAGAAACACCGCAGATAGCTCAGTGCCGACGCCGAAGCGACCTTCGGGCGCTGCTACAAGAATACCACAACAGAGTTTGCCAAATTTCGGGAATGCCTCGGAACATCGACAAGCCGGTCCCCGAATCCCGTACAATCTGAACGAGGATGTAAACAACCCTCGAATATCGCCAAATCAAGGGGTAAGACAATCTCAGCATGGCCAGTACAAGAATTACAATCGAAATACTGGCGAATTGAGCTACTCGGGTAATATTGTCGACAATTCCAATTATCATCAttcgcaacaacaacaacaaccgtCAAAGGTTATTTACACCTGCAAGCTCCAGGGTTGTTCATTTCGATCCGATAATATCTCGAGCCTCCGTACCCACGAAAAAAACCACATGAATCAGCAACTCTCCACTATGCCGGGCAACTTGATGCAGCAACAGCGGCGTCATTCGATGAAACATGTGCCAGTTAGTCAGATGCCGGAGAGGACGCGCCACGCGATACCCACCAGTCGACCGCCACCAGCACACCCGAACGTAATCGACAAGCGTTGCATTTGCCGCATCTGCAATAATTATTGCGCCTCGAACACAGAGTTGATTGATCACATGGCCCAGTGTCACAACACATCGGGTAACCAGCTCTGTTGCTACGTGTGCGATTACTGCCCGACTCCATTAATTTTTGAATCGGAGGACCTGCTACGCAAACACATGAACTCTAGCCACAACCACTTCTGTCAGCTCTGCAATAAAAGATATCCCTCGAAGGACGACCTCATTCTACACATGGAGGTGCACGCGAGAGGTACCTGA
Protein Sequence: MASQLNTPMKPRLYSVFLLVISHSSVCDFQVAAYEKPLCSDDNEAILSCQRIQPYLGKNYPNCSRTLPFAYLVNKIKPENALETSTKLPNNTLNLDELKKKLNQNEDANIPENLESALLNDNTNNTVDLGNGISDKSVQNGEWKFRRKRRNIQSENAQQAVEGCPKNWRYLSPLNVSEQIAKDDLSSGNVSDVTSNMSYNNEQLGIITKVEDKLNEQIDTNINEFPIKPRTRLRRRVLRRSFIESSNIFYNRRRKRPINYLEDYGDSDTNESTLSALKQQGAHLQNRRRPTLRERQNLKFYGSQEMDESDMEVAEFTCIGLKNRIPSKEVDSDNVDNSSNRLQIHATGDSDSFNRDSRSRTTSISENVEDSQSIQPVHKILGSDLSNKLKEQTPDEHSQIHNDENKDQEADDFSMNYIQLRSRSRLLTTGGHLKILKKTELTQKEEHTSSHSVCPPNFNIDGRNERISSTFTISNKSNGITTIGKKFKLSNIDEFPINKKNTSSILSRNETKENARINRHRSITPSKSPKQPKSNLMDKLSNFELKLEQPSSIKWTNKEDVPFNNLKVQLIRLETICKNFEDYSASEIELLTSKYIDMSMNSNFTCDTWHNTTNYHRSEGLIEKLVEEVDNCDYVSDVELQEEIEEATTTVRSEDVHMEDSIDKAKVKSVKPNLKQIENAFSSFTTLESAIATLVDAEPGEPRNFGAITISEILKSPSSSVKEKEKDNTIKLSDQTMDGKNQRQLTLSEQLSSSVHDTILVNGTTMYGCPVRNRIFVTENLLRQQAAACCIDSANANTSKSTRIKHKVQVPSDLSSKKPIPAKCKRQVRSIENLKCTICSVIFDSKEVLFDHIMTHSEQELQEAYKMAKAKAKQRQSEGSTSMSEESDKETQQTTEDSHDKEAQNKTSTENKGRKKSTDSSNQSSRSSMDVEDLVFDDSLKTPCIRSGPVTVDAQQQIIEIECNESLSNVDQLSTSMQCSKTVTICSCHAHETTPQDLQIEMVLMCKTCNVVFRRRDCFEVHYRTSPECRRRRTNNEVTKMPKLFCSGCPCVLDSLMDMRAHLEMHARENCQGTVTFICNICKVAFFGVGGIFYSHWFNHTKAPNFVASRYSFPKLSVVSVVEDSNVAITTTKSQEGFFYIAEHVCRQCRLPFSSEPEFIKHKAHPCQPQQPTPRTDGLDGNRLQMIKLICDLCKKYYVSKENFDRHCSERNHLKTPITKFSRLPINANEQAFVCSLCRAVSKSLDDLKEHWKRIHSPIMELYTCKTCNIVPSNDVTNYTYDKFETHCRIVHKSEVITCLVYFVTARYVCNICRFGFETEKSMKEHQVVHQKRSSQNNSANASLVGLPMEQQMTTLWVADKHVAPDGGRKVHPVYVHYPGVNSKRVVPILPAPPKSQSQHSSQPRNANNAKNNPPSSFPSAASSSTSTSSVPHGLSSMLRNMLVQRALDQPQPPKQNYTTNSNVETIFIDSRSNSPSSDPPAPNATNKSGTTSGNDTVIASKKSYMTMVNPNFESLLGTNSTLQATDNNNDSNLDKDNSGGTATPVSMDSLTPQPFEVVLVTDDLSENSNCESPTMNDRSRISSADKVLDLVNSTSNQHQMTEGNEVSSAKSSKFLRVRSIAELQHMKIHLCSVCGLSFDTPQALDQHSRQHEITGEINRMTPVQMISPMVAQSNKESNDSQNLLHSSQASQKMALLTPNGKVLPTYDPYNKSNPSVLSNQLYQPLQQQQYHQYKQQHNPSYWFASCNDTYNVNQPSLHYNAYSRHHQQPHQQPQHHQPQHHQPQHHQPLHHEPQHPQSQHLHSQHHQPLHHQSQHHQQLQSKQLTHQSSAVRRPVNLNNANGAYVSRGPPPAYPSTSNSIAPSRSSSIQLPDRNTADSSVPTPKRPSGAATRIPQQSLPNFGNASEHRQAGPRIPYNLNEDVNNPRISPNQGVRQSQHGQYKNYNRNTGELSYSGNIVDNSNYHHSQQQQQPSKVIYTCKLQGCSFRSDNISSLRTHEKNHMNQQLSTMPGNLMQQQRRHSMKHVPVSQMPERTRHAIPTSRPPPAHPNVIDKRCICRICNNYCASNTELIDHMAQCHNTSGNQLCCYVCDYCPTPLIFESEDLLRKHMNSSHNHFCQLCNKRYPSKDDLILHMEVHARGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -