Ccor013120.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratosolen corneri
Gene Symbol
RREB1
Assembly
GCA_030522565.1
Location
JAPYYT010004285.1:1-6194[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0091 1.7 10.4 0.1 1 23 144 166 144 166 0.96
2 13 0.00029 0.053 15.1 0.1 1 23 182 204 182 204 0.97
3 13 2e-07 3.7e-05 25.1 1.3 1 23 210 233 210 233 0.98
4 13 0.05 9.1 8.1 0.0 1 23 322 346 322 346 0.95
5 13 0.016 2.9 9.7 2.4 2 23 352 374 352 374 0.95
6 13 1.2 2.2e+02 3.8 0.5 1 19 430 448 430 450 0.90
7 13 0.06 11 7.9 0.1 1 23 565 587 565 587 0.96
8 13 2.3e-05 0.0041 18.6 0.3 1 23 596 618 596 618 0.98
9 13 0.0011 0.2 13.3 2.8 1 23 624 647 624 647 0.97
10 13 0.00041 0.075 14.7 3.0 1 23 1078 1101 1078 1101 0.97
11 13 0.00059 0.11 14.2 0.1 3 23 1411 1431 1409 1431 0.97
12 13 0.82 1.5e+02 4.3 6.5 1 23 1437 1460 1437 1460 0.97
13 13 0.0037 0.68 11.7 2.2 1 23 1500 1524 1500 1524 0.97

Sequence Information

Coding Sequence
ATGCCCCGTCGTCGATACTCGCTATTCCTCGAGTTTCTTCCTCCGATAACGCAATCGGGCCAGGGCGGGAGGGTGGGAGTCTCGTTCCGTGGCCTCCTTATCGCAAAGATGATTCGGCGTCCGATATTCAACACCCCGCGAGCGGTCGGGCGCCTACGTCACTCTTCCCGGCCGCTTACCTTATTTCTGCTCCTTTTAATGCGCTGGCGGCCCCGCGATTCTCACGAGAAACTCCACGGAAGAGGATCGCAAGCCGCAAACATCCGGCAGAGTCCGGATCGGATGCTGCTGCGGTTCGGCTTTACTCTTCTCTTTGGAATTTCCCCACTCGTAGTGACTGCAGAGACTGGACCTGATCAGCGCGACGGCGGCAACGAGAGTCAAACGGATGTTGCATCATCACCACTGGTTGAGCAGCCGGAAGGTACCCACCCGTGCCCGGCCTGTCCGCTCGTGCTCGCGAGCTCGCGCGACCTGACGACTCACCTACGAGGCCACAACTCACCCCGCAGCATCAGCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCACAAGGTACTGAGCTCCGCCAGCTCCCTCGACCGCCACGTCCTCGTGCACTCGGGCGAGAGGCCGTTCAAGTGCAAATACTGCGACATGGCCTTCACGACCAACGGCAACATGAACAGGCACCTGCGCACGGCCCACAGGACGGTCTCGCCCTCGCACAGCTGCACCGACTCCGAGGGCAGCTGCGACTCGGAGCGGCCGCTCAAGCGCCGCCTCATCCAGGAGGAGTACAACAATAACGAGGTAGCCAAGCGCAACTCCCCGGAACTGGTGGCCGAGCACGGCAAGCGCAAGTGCCCGGATTACGCGGAGGAGCTCGAGGGCCACCGCCGGCACAAGATCCTCCTGGGCAGCGGCCGGGCGGATTTGCGCCCCGGCTACCCGGACGCCGCCCAGAGCGCCTACAGCTGCGCCGTCTGCGGCCGACAGGACTTCGCGACGAGCGCCCTCCTCGAGGCCCACCTCGAGCGCAGCCACCCGGACATACCGGCCAAGTGCGACAGCTGCAACATCTCGTTCAAGAACCACCGAGCGCTGAATCTCCATCGGTTCATGATCCACTTTAGCGAGCACGGGGCCACGGCCGTGAGCCGCAACCTCCGCAACTCGGTCGTCGGCTTCAACGACCTCACCTTCGTCGACTTCTCCTCGGACAAGTTCCCCGCGATCGCCCGGGCCGTCTGCGAGCAGTCCCTTCACCGGCCCGTCTCGGGCGAGACCCCGCGGTACCAGTGCTCCAAGTGCCTGCGCGCCTTCCCCTGCCGCTCGGCCCTCGACGCCCACGAGACGGAGTGCGGACTGCTGCACCACGACGCGGCCGATCGCCGGATGCACGACGAGCAGTCGACGAGGGACGACTTCTTCGCGGGCCTCGATCTCCAGAACAAGGCGGCCCTAGCCGAGGCCAAGGAGGGCAAGGACCTCGCCGACATACAGAGCATCATATCCGTCACCTCGGGCCCCATCCTCCAGAGCTTCTCGCGCTCGGACACGAGCACGCCCGACAACTGCAAGATCAAGCAGAGCCTCGGCTCCTCGGGCTCCTCCGGCACACCCTCCTCCGAGTACCACGAGGAGGAGGCCCAGGACGCGTTCGCCGCCGAGTTCAGAAAGATGAAGCTCAAGGGCGAGTTCCCCTGCAGGCTCTGCACCGCCGTCTTTCCCAACCTACGCGCCCTCAAGGGCCACAATCGCGCCCACATGGGCGTAGGACCGGGCATGCCCTATCCCTGCAACATGTGCCCCTACAGCAGCACCGACAAGGCCACCCTCGTCAGGCACCTGAGGTCCCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGCAACTACGCCTTCACGACCAAAGCCAACTGCGAAAGGCACGTGCGCAACCGCCACGGCAAGCTCTCGCGCGAGGAAATCAAGAGCGTCCTCATCTACCATCCGAGCGAGGACTCGACCAACGACAGCAGCCTCGAGAGAGGCTCGCCCCGCGGACTGGCCAGGGACGACATACGCAAGACCCTCGTCTACTCGAACGAGCGCGACGAGCCGCTTctccagcaacagcagcaacaccatcaccaccaccatcatcatcaccagcagcagcagcagcagcagcaacagcagcagcagcaacaactgCATTACCCCGGCGAGATAAGGATCAAGGACGAGACGAAACTACGTCAGCCGGGTTTGGTCGGTTTGGCCGGCCTCCACCACACGGTCGACGTTGGCCATTACGACAAGAGCGAAGTGTTCTCACGGCCGTCGGCCATGCAGCAACCGCTCGAGCTCACCTACAGGAGCGACGAGCTCGACAAGTCACGGGGGACGTCTCTCAAAAACCTGGAGGACGACCTAGATTCTAGGTCCTCGGACGGTAGCGTGTCTCTAGTCAGCGAAACCAAAGCGGACGCACACCAAAGAATCCAAGCCAGCCCAATGGACCTCAAAAAGTCCAACGGCCACGATACATTGGCCATGGATGCCGTCGAGGACGACGCGCCCCTCGACCTCTCCATGGACGTTCTCGATTTGAGCAAGAAGGCTACGGCTGCGGCTGTGGCCGCCGCCGCAACTGCCGTAGCCGCGGCCATGCAGGACAACGAGGTGGGCGCCGCCGGGGACATTAACGGCAACGCCGAGGACCTCACCGGCAACCACAAGGACCTCTACAACACGACCAATCAGCTCCTGCTTACCCAGGCGCTGCTCAAGGCCGGCCAAGTGGGCGCCCAGCCTTCATCCCTCGAGACCTTCTACGCGAACGCCCACATGATTTACCGGAACTTTGGCACGTTCTCGGGCGTCGGGGCTGGCATCCTCCAGCCCTACCTATTCAACCCGCACCTCTTCAGCCAGGACTTTGCCATGAAGGAGAGGCTGCAGAAGGAGCTCGTCCGTGGCCTCCAAACGAGCGGCGGCAGCCTCGTGGAGCCGCCGCCCCCGGGCTACGCGGCGGCCTTCCCCCCGGCCCGCAACCCACCGCCCCCAACTCACAGCGTCAACGAGGCGAGCGAGTACCCGGCCATGCTGCCCGCCAAGCTCCTGGGCAAGAGTGGCGTGTCGCCGCGCGAGAAGCTCGAGGCCCCGCCGTCCGCCAACTCCGTCAAGATGGTCATTAAGAACGGGGTGCTGATGCCGAAGCAGAAGCAGCGCCGCTACAGGACCGAGCGCCCCTTCACCTGCGAGCACTGCTCCGCCCGCTTCACCCTGCGCAGCAACATGGAGCGGCACATAAAGCAGCAGCACCCGCAGCACTGGAGCCAGCGGCCCCGGGGCGGCCACTCGACCCGGGGACGGCCCCCGACCAATCCCCCCACGCTGCTGCAGAACCTCGGCCACTCGTCCTcccagcaacagcaacagcagcaacagcaacagcagcagcagcagcagcatcagcaccACCAGGTCGGCCAGCCTTACTCGAATCTGCTGCCAAAGCTCGGCCAGTCCTCGGCGGCAGACTACGGGAAGCACGCGATCTCCGACCAGGTCAAGTACGCGATTCTCGCCCAGCAGCTCAAGGGCAGCAAGCACGAGGACAACGACACGGACGAGGAGCTGATAATCGACGAGGAGTCGGCCGGCGCGGAGAAGGAGGCCGCCGCCAAGGAGCCCTCGGAGCGCACCCTAAGCCTCCTGCGGGGCAAACTCGAGGCCAACATCGAGTGCAAGGGGGCCGAGGAGCGGGGCGTTAAGGAGGCGAGGGGCGCGGGCGAGCACAAGGTCCAGATTAAGGAGGAGGCCGGGGGCCGGGAGGAGTCGTCGCAGGGCGGCGGGGGGGCGTACCGCGAGTCCCTTAAGGCGAGCGAGTCAGCGGGCTCGGAGAGCGAGGAGGGGTCGAGCGAGGTGCGCGGAGCAGCGGGGCCAAAGTCCGAGGGGAAGGTCGAGGTGAAGACGGAGCAGAACGAGAGCGAGGACCTGGCGAGCGTGTCCGAGATCCTGGACAATGCCTCGCAGCATTACCAGCAGTTCCAGTCGCAGTACATGAGCGACGAGGAGGGCTTGGTCGCCTCGACGAGCGACTGCAATCAGTCGGGCAGCGACGAGAAGTCCGACTCGATCAATTCCGGCAATTCCGGAAACTCCTCCGcctcgaagaagaagaagaaaatgaagaagaagaagaagaagaagaagtccGCGTACTCGATGGCCCCCAATCGGGTCATATGCCCGTACTGCGAGCGGCCCTTCCCCTGGACGTCCTCGCTCAGGCGGCACATCCTCACGCACACCGGGCAGAAGCCCTACCAGTGCATGCACTGCTCCCTCCTCTTCACCACGAAATCGAACTGCGACCGCCACCTGCTGCGCAAGCACAAGGCCAACGCCAGCAAGATACGCCGGGCGCGCAGCACCTCGTCGCCCGAGGCCCAGGAGGCCCCGGGTGGCAACAATAACGGCCAGTTCTCCATGAGGAACGTGCCCGAGCGGCCCTACAAGTGCAATCAGTGCCCGAGCTCGACCTTCTCCACCCTCGGCAACCTCAAGAAGCACAGGTCGACGAAGCACGCGCGCAACGCCAAGTCGCGGCCCGACTCGCCCTCGAGCGAGGCCCACAACAGCCCGGACCAGAGCCCGAGCGACAACGACCAAAGCGGTTACGAGAGCCAGTCCTCGGGCGACTCGGAGAACCTCGAGGGTGGCGCCACCGCGGCCACGAGCGGCGCCCCCACCAAGCCCTCGGCCCCGGCCACCGCCAACCCCGGCGCACCTCCCCCGGCGACGAGCGAGGCCTCGCGCTCGAGGCGCGCCTCACCAAGGTCGTCGCCCGGCCCGACCGCCGAGGCGCCCTTCAAGTGCCACCTCTGCGACAG
Protein Sequence
MPRRRYSLFLEFLPPITQSGQGGRVGVSFRGLLIAKMIRRPIFNTPRAVGRLRHSSRPLTLFLLLLMRWRPRDSHEKLHGRGSQAANIRQSPDRMLLRFGFTLLFGISPLVVTAETGPDQRDGGNESQTDVASSPLVEQPEGTHPCPACPLVLASSRDLTTHLRGHNSPRSISDCSGEEVDYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRTVSPSHSCTDSEGSCDSERPLKRRLIQEEYNNNEVAKRNSPELVAEHGKRKCPDYAEELEGHRRHKILLGSGRADLRPGYPDAAQSAYSCAVCGRQDFATSALLEAHLERSHPDIPAKCDSCNISFKNHRALNLHRFMIHFSEHGATAVSRNLRNSVVGFNDLTFVDFSSDKFPAIARAVCEQSLHRPVSGETPRYQCSKCLRAFPCRSALDAHETECGLLHHDAADRRMHDEQSTRDDFFAGLDLQNKAALAEAKEGKDLADIQSIISVTSGPILQSFSRSDTSTPDNCKIKQSLGSSGSSGTPSSEYHEEEAQDAFAAEFRKMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCPYSSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDSSLERGSPRGLARDDIRKTLVYSNERDEPLLQQQQQHHHHHHHHHQQQQQQQQQQQQQQLHYPGEIRIKDETKLRQPGLVGLAGLHHTVDVGHYDKSEVFSRPSAMQQPLELTYRSDELDKSRGTSLKNLEDDLDSRSSDGSVSLVSETKADAHQRIQASPMDLKKSNGHDTLAMDAVEDDAPLDLSMDVLDLSKKATAAAVAAAATAVAAAMQDNEVGAAGDINGNAEDLTGNHKDLYNTTNQLLLTQALLKAGQVGAQPSSLETFYANAHMIYRNFGTFSGVGAGILQPYLFNPHLFSQDFAMKERLQKELVRGLQTSGGSLVEPPPPGYAAAFPPARNPPPPTHSVNEASEYPAMLPAKLLGKSGVSPREKLEAPPSANSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPPTLLQNLGHSSSQQQQQQQQQQQQQQQHQHHQVGQPYSNLLPKLGQSSAADYGKHAISDQVKYAILAQQLKGSKHEDNDTDEELIIDEESAGAEKEAAAKEPSERTLSLLRGKLEANIECKGAEERGVKEARGAGEHKVQIKEEAGGREESSQGGGGAYRESLKASESAGSESEEGSSEVRGAAGPKSEGKVEVKTEQNESEDLASVSEILDNASQHYQQFQSQYMSDEEGLVASTSDCNQSGSDEKSDSINSGNSGNSSASKKKKKMKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANASKIRRARSTSSPEAQEAPGGNNNGQFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHARNAKSRPDSPSSEAHNSPDQSPSDNDQSGYESQSSGDSENLEGGATAATSGAPTKPSAPATANPGAPPPATSEASRSRRASPRSSPGPTAEAPFKCHLCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305794;
90% Identity
-
80% Identity
-