Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_030522565.1
Location
JAPYYT010000707.1:27202-39087[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4e-100 8.3e-96 321.3 6.6 1 218 470 680 470 680 0.91
2 4 2 4.2e+04 -9.0 8.3 37 63 686 712 684 720 0.74
3 4 0.0069 1.4e+02 3.4 6.0 54 118 856 921 825 929 0.55
4 4 0.064 1.3e+03 0.2 2.9 53 104 949 999 933 1011 0.42

Sequence Information

Coding Sequence
ATGGAATCGCCTTCGGCACAACAACTAGCCGCCGAGGCCCAAGAGGACTGTAGCCCCGTGGAGGTGTTTCTCCACGATGCCACCGTTACCGCAGAGGATGAGGACATTTTGCCGGGCCAGGATGGGGGCGGCTTCGCCTTTCTCGACGATCTGACGAGCGGCGACTTGTCCTCCAGCGTGCGACTCGAGCAGCTAAGCAAACAAGAGATGGGCAGCTACGCGTTCAAGGCTGCTGCCGTCGAGGAGGATCCACTTAGGTTACATCCTGCCGAGGATTCCGAGACATCCAAGGATTCGGAGGCGGTGCTCGTCGGAGCCCCGACGTTTTCCAGCTCGAGTCCGTGCTCCAGCCCCAGTCCCAGCCCCAGCGTCAGTCCCATCCGCAGCTTCAGTCCGAGCCTGAGCCCGGTGATCGCGTCGCCGAGGAGGAGGCCGTTGCTCTCGGCCAGCGCGGCCTCGGACTTCCAGCCGATCGGCACCGAGGTCTCCGAGGAGAAGGCCCAGCAGCTGCGCAACGAGGTGAAGCGCTTGTCGCCGGTGCACGTCAGCCTCCGCGAGCGCACCCTCGGCGAGATATCCCTGACCTCGGACAGCCGGAGCAAGCCCAACGAGTCCGAGGGGGAGGTGGGGGAGACAGGGATAAGCCAACGGGATCGCGTGCTGCGGCTTCCGCAGATCGACGACAACGTCAAGCCGATGGAGCTGGAGCTAGGCTCGCCCACCGAGTCCGAGCCCCTCGACTCCCCCTACGGCCTCAAGCGCTGCGGCCGCGACAGCAGCCTCCTCGACGGCAGCTCCAAGGCCATCGTCGAAAAGCTGCGCATCGGCAACGAGGTCGAGTTCCCGGGCTGCCGGCCGAGCTCGCCCTCGGCCGTGTTCGCCGACGCGGAGGAGGTAGAGACCGGTTCCGACAGCTCCGAGGTACTGGCCTCGATGGCCGCCGCGGCCGTCGGCTGCGGGGAGGCCCTCGGCCAAGCCATCGCCACGAGACTCGGACAGGAGCGGCCCGAGGCCTTCACCGACGACTCCGCCGAGAGTCTCGCCCTCGCCGCCGGCGTCCGCGACGAAGTTCGCTCCGATGGCAGCGACTCCGGCTTAGGCAGCGAGATGCCCGGGGACGCCTGCCCCGCACCCGCCCCGGAGAGCGACTCCGAGACCTCCTTCCTCGACAGGATACCCGACGATATACTCTCCGAGAAGGACAAAGCTGAGAACGACGTGGACGTCTTCGTGGAGGCCGAGCTAAAAGCGCCAACACTTCCGGATTTCCGAGCGCCCTCGAAGAGCAGCCTCAAGCGCAGAATGGCAGACTGCATGGAGGAAGGCGAGGACCACCTGGGCCCCAAGAGGCTTGGCGTCGACGAGTCCACGTCACCGTCTTCGACAGCCGAATTCCCGGTGATTGTGAAGAAGAAGCGCAATATACACTTCGACGCTGTCACCGTCTATTACTTTCCCAGGGCTCAAGGCTTCACCTGCGTGCCTTCACAGGGCGGCAGCACGCTCGGCATGAGCGCCATGCACACGCACGCGGAGCGCTTCTCCCTGTCGGAACACGCGGCCGAGCAGCGCCGACTGCACCGGGCCCGACTGGCCCAGCTGCGCTCCGAGAGGGCGGCCAACTGCGCTGCGGAGGCGGCCTCCAGCTCGGAGGACCCGAGCGACGACACGGACGACGAGCCAAGCGACGCCGAGGAGCTTGATATCGACAGCTATTACTTCCTCCAGCCGGTACCCACCTGGCAGAGGCGGGCGCTCCTGCGGGCTTCCGGCGTGCGCAGGATAGACGCCCTCGAGAAGGACGAGTGCAGGGACATCAGAGCCAGCCGGGAACACTGCGGCTGTGGCTGCAAGGGCTACTGCGACCCGGAGAGTTGCCCCTGCAGCAGAGCCAATGTCAAGTGCCAGGTGGACCGAGCTGGCTTCCCATGCGGTTGCTCCCGAGACGGCTGTGCCAACAGCACCGGCCGCATCGAGTTCAATCCCGTCCGCGTGCGCACGCACTTCATCCACACGCTCATGCGACTCGAGCTGGAGAAGAAACCGCAGCGCGACGAGGAGCACCAGGAGAGCCAGCAGCACCACCtacaccaccatcatcatcaccaccatcaccatcatcatcatcaggaCCGACTGGCGGTGCCACTTGCCTCGGTCATCGAGTCGCCGGCCGACTGCCTCGCCGGTGGCTTCACCAGCCTCCACTACGACGGCCAGGACGGCCCCACCCGTCCCGATAATCTCGACCTCTATGCCCTCAGGGACGACTGTTACCCGGCCGAGGACTGTATGGGGGGTGACGCTGGCGGCCAGGGCCAGCAACAGCAGAGGAAGCTCCACGCGGACTTTGGCCAGAATTTTCAGCACTACGGCTCTCAGGGCCCTAGCATGCCCAGCTTCCACCAGAATCCCTATGCCGATTACCAGAGCTATCAGGCCCTGCCGTCAACCTCGAGGTCGGCTTTTCAACCACAATTTCAGCCCATCACATCGAATCCCAGCTTCTCGCACTACGGCTCTTATTCTCAGGACTCGAGCTCGAGTTCCGCATCCAGCAGCTGTCAGCAACAGACTCATTCGCTCATGCATCAGCAACAACACTCGCAACAACAACAGccgcagcaacagcaacagcaacagcagcagcaacagcagcagcagcagcagcacagtGGCATCATTTACGAAACGTCTTTCGCCCAGGACGAGGTGACGGGCTCGCGATACACAAACCTCAACTCAATGCAACCGATGAGCTCGGTTGTTCAGCAAATCGGCAAGCTCGAACCCTTCACCGAGCTACTCTCGTCCAGGTATTCCTACTACGACGAGGTGGTGAATCAGCAGCCGCAGCAaccgcaacaacaacagcaagaGCAACAACACCACGAGGCTTATCACCACGTGAACGGCTCAAAGATGGACGTGAAGGACGAGATGATGGGGGTAGATCAGCAGCATCAAGTGCAACTAGCCGACGATGACTGCGACGAGAACTTCGGCGAGATCATTAAAAAGTCGATGGTCGAGACAGTGTCCGCTTAG
Protein Sequence
MESPSAQQLAAEAQEDCSPVEVFLHDATVTAEDEDILPGQDGGGFAFLDDLTSGDLSSSVRLEQLSKQEMGSYAFKAAAVEEDPLRLHPAEDSETSKDSEAVLVGAPTFSSSSPCSSPSPSPSVSPIRSFSPSLSPVIASPRRRPLLSASAASDFQPIGTEVSEEKAQQLRNEVKRLSPVHVSLRERTLGEISLTSDSRSKPNESEGEVGETGISQRDRVLRLPQIDDNVKPMELELGSPTESEPLDSPYGLKRCGRDSSLLDGSSKAIVEKLRIGNEVEFPGCRPSSPSAVFADAEEVETGSDSSEVLASMAAAAVGCGEALGQAIATRLGQERPEAFTDDSAESLALAAGVRDEVRSDGSDSGLGSEMPGDACPAPAPESDSETSFLDRIPDDILSEKDKAENDVDVFVEAELKAPTLPDFRAPSKSSLKRRMADCMEEGEDHLGPKRLGVDESTSPSSTAEFPVIVKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSAMHTHAERFSLSEHAAEQRRLHRARLAQLRSERAANCAAEAASSSEDPSDDTDDEPSDAEELDIDSYYFLQPVPTWQRRALLRASGVRRIDALEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSTGRIEFNPVRVRTHFIHTLMRLELEKKPQRDEEHQESQQHHLHHHHHHHHHHHHHQDRLAVPLASVIESPADCLAGGFTSLHYDGQDGPTRPDNLDLYALRDDCYPAEDCMGGDAGGQGQQQQRKLHADFGQNFQHYGSQGPSMPSFHQNPYADYQSYQALPSTSRSAFQPQFQPITSNPSFSHYGSYSQDSSSSSASSSCQQQTHSLMHQQQHSQQQQPQQQQQQQQQQQQQQQQHSGIIYETSFAQDEVTGSRYTNLNSMQPMSSVVQQIGKLEPFTELLSSRYSYYDEVVNQQPQQPQQQQQEQQHHEAYHHVNGSKMDVKDEMMGVDQQHQVQLADDDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305636;
90% Identity
-
80% Identity
-