Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_030522565.1
Location
JAPYYT010001246.1:18137-29771[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.1e-19 3.1e-15 56.8 0.0 1 43 350 393 350 395 0.95

Sequence Information

Coding Sequence
ATGTCACGTGCTTCGAGCCGAGTTCGAAAGCTCAGAGTGGGACTGCTGGATTCTGTTGCGCGTGAGGTCTGGGGTGGCGGCACTTACCCACGCGCCCAGGTGGACGACAAGGAACTTTCGGGTgcagaagaagaaaaggaagtCGAGAAAGCCTTGCTGAAACCTTTACTGTCGCTCGAGGATCTTGTGAGATTTTCCAGTCTCGAAGGCAGTGGTGGCGATTCACTAAGAACTCTATTGCAACGCGGTCAGGAAAGTGGACCCGCCGAGTGGTCAGCCTTTGAACATGCCAATATTGGGCCCTACATACAAAAGATGTTGGCAGCTGCTGATCCATTTAAAGGAATGGAAACACAAGATTACAGAATTCCAGAGGTCATGCGTCGGTTAATGTGTGAAGATAAAAAGATTAGCAAGGAAGCTAACATTAATGGCGACCAGGTACACCTTCATCATGTTTCGTTGCAGCATCGTCTCCCTCAGTCGGGCCTACGGCCGCCGATGACGAACGACGATTTCAATCCGGCAATTGAAGAAGAGGCGAGTGACAGCGGTCAAGGCCGACCGATACTAAAAATTCCGTCCTATAAACCGGCGGGTAACGCCCCAGGGCCAAGCAAGAATGGTAGCGAGCCAAGCGCTTTGGCCTTTCCCCAGAGCTTCAACACGGTTCCGGGTAGTCCAGCACTCCTAGAGCGCGCAAGCCCTGCTTTCTCTGGTACGAGCTCGCCTACTAACTCCCTCGTCGGCAAGAGCATAGCCGTCAACTTCCGCGACGTCATTGCTAAGAGTATCAGCGTCAAATTTCAAGAAGGACAGACACCTACGACTATCCCAAGTCAAGGGGCACCAGTAGGCCAATCAATGATCACCGAATCGAATCCTTACAAAAGAGGCCGATACACACCGCCACAACAGTCCCAGCAAAGCATGGGTGGACAATCGCAACAATCAAAAATTGGGGCCCAATCCCAGGATAAGCAGCAGAACAAACCCAATACGGGCGGTAAAGGTACGAGGCCGAAACGCGGTAAGTACCGCAACTACGATAGAGACAGTCTCGTCGAGGCCGTACGGGCCGTACAAAGAGGCGAGATGAGCGTGCATAGAGCCGGTAGCTACTATGGCGTTCCACATTCCACACTCGAGTACAAGGTCAAGGAGAGACACCTTATGAGGCCGAGAAAAAGGGATCAAAAGCAGCCGGACGATAAAACTAAAGAAACAACAACGCCGGCGAACTCAACTCTGCGTACTACTGTTGCGACGACAACAGACAAGAAGCCACTTCTTAAAGTTTCTCAAAAGCCGTTCGCAACTGCAACCGGCACCGCTGGTATACCCGGACCGAACGGCCTCAAGATGCCGCCCTTCATAGACGGCATGCCGCATTTGCCATTTGCCCACCCCTTCAATTTTTGGGGCCCGACTCCCTTCATGCCCTCGCCCTTTATTTCGAGTGGACCTAACGTCTCGGGCATTATACCGGAGCAGTACTTTGCCACGCAGCGTATGCGGGGACTTCAGGAACAGCAACGTAATGCCATCGTTCAGCAACAGCAACGTGATGGTATACTAAGTGAACAACCAGGTACATCGAATTCTCGAAGCACCTCGATGATAAAGTCACCACGTGAAATGGCTGAAAGCCTATACGACGGCACAGCTGCCAATGGTAGTTTCCTCGACAATCTGATAAGATCGAGCCTCGAGTCGGGTATACCGCGAGAGCGCGCCATTGCAGAGGCGCGAAGCAACGTCgttcagcagcagcaacagcagcaaccaTCTCAACAACATTCCGAAAAACTAGGCAATAGCAAGGTGCTCATCGATCAACTATGCAGGAACTCCAGACGCACGCCTCTGCCCCGAACAGGCCAACAGGACAGCAGCGAAGACGAGTCGCCGAGCTACAGGACGATCTCCCAGCAAAGGCCGTTACCCGAGCGACCTGAGCGAGTGCCTACCGTTGATCTGAGCCCATCGCCCTCGGAGCGAGCAAGAGCCATTGATGAGGGCAGCGATAGAGGCCTCACATCGCCGCCCACGCCGCTCTCACTCTCGAGGCTCAGCGGCTCTGGCAGGGAAGACGAAACTACCCGGGACTCGAGGAGTAGCCGAGAACGTGAGGTACAAAATGGTGGCGGCAGTGAGAAGACAGAGGACCGCcaagaaaaaaataacaagaAGCTGAACCACTACCCGGATATACACAACCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAACCAGAAGACTCAGCAACATAAGGATTACACGTCCGGGGCTAGTGACTTGGTGGTGCAGGTGCAGCGCAGCTACAGCAACTCGACCACATCGGCCGTCATCGTCACGACCACCGGCAATGGCTGTCCGGAAACACCGAACAATCAGTTGCAAACATCATCGCAACAAGCGGCACCGCAGGAGCGAGTATCCTCACCAAGTCTACAGCCGACGATGATGGAAGAATCGGTAGAACagtag
Protein Sequence
MSRASSRVRKLRVGLLDSVAREVWGGGTYPRAQVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSSLEGSGGDSLRTLLQRGQESGPAEWSAFEHANIGPYIQKMLAAADPFKGMETQDYRIPEVMRRLMCEDKKISKEANINGDQVHLHHVSLQHRLPQSGLRPPMTNDDFNPAIEEEASDSGQGRPILKIPSYKPAGNAPGPSKNGSEPSALAFPQSFNTVPGSPALLERASPAFSGTSSPTNSLVGKSIAVNFRDVIAKSISVKFQEGQTPTTIPSQGAPVGQSMITESNPYKRGRYTPPQQSQQSMGGQSQQSKIGAQSQDKQQNKPNTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKTKETTTPANSTLRTTVATTTDKKPLLKVSQKPFATATGTAGIPGPNGLKMPPFIDGMPHLPFAHPFNFWGPTPFMPSPFISSGPNVSGIIPEQYFATQRMRGLQEQQRNAIVQQQQRDGILSEQPGTSNSRSTSMIKSPREMAESLYDGTAANGSFLDNLIRSSLESGIPRERAIAEARSNVVQQQQQQQPSQQHSEKLGNSKVLIDQLCRNSRRTPLPRTGQQDSSEDESPSYRTISQQRPLPERPERVPTVDLSPSPSERARAIDEGSDRGLTSPPTPLSLSRLSGSGREDETTRDSRSSREREVQNGGGSEKTEDRQEKNNKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSNQKTQQHKDYTSGASDLVVQVQRSYSNSTTSAVIVTTTGNGCPETPNNQLQTSSQQAAPQERVSSPSLQPTMMEESVEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-