Basic Information

Insect: Ceratitis capitata
Gene Symbol: stc
Assembly: GCA_000347755.4
Location: NW:115202-123446[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.2e+04 -4.4 1.6 15 19 618 622 617 622 0.81

2 13 0.34 2.1e+03 -1.7 0.3 4 10 651 657 650 658 0.92

3 13 1.3e-06 0.0082 15.6 14.4 4 19 665 680 663 680 0.93

4 13 2e-06 0.012 15.1 12.3 3 18 718 733 710 734 0.87

5 13 6.9e-07 0.0042 16.5 19.4 1 19 774 792 774 792 0.98

6 13 0.0002 1.2 8.7 17.7 4 18 840 854 833 855 0.86

7 13 0.036 2.2e+02 1.4 11.5 1 11 895 905 895 916 0.94

8 13 5.9e-10 3.6e-06 26.3 15.5 1 18 922 939 922 940 0.97

9 13 0.95 5.8e+03 -3.1 0.5 6 10 969 973 968 975 0.80

10 13 2 1.2e+04 -8.1 12.3 9 18 986 996 976 997 0.73

11 13 1.6e-08 9.9e-05 21.7 10.6 1 17 1033 1049 1033 1055 0.89

12 13 2e-07 0.0012 18.3 14.5 1 19 1065 1084 1065 1084 0.97

13 13 0.66 4e+03 -2.6 0.1 8 12 1100 1104 1098 1104 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.2e+04	-4.4	1.6	15	19	618	622	617	622	0.81
2	13	0.34	2.1e+03	-1.7	0.3	4	10	651	657	650	658	0.92
3	13	1.3e-06	0.0082	15.6	14.4	4	19	665	680	663	680	0.93
4	13	2e-06	0.012	15.1	12.3	3	18	718	733	710	734	0.87
5	13	6.9e-07	0.0042	16.5	19.4	1	19	774	792	774	792	0.98
6	13	0.0002	1.2	8.7	17.7	4	18	840	854	833	855	0.86
7	13	0.036	2.2e+02	1.4	11.5	1	11	895	905	895	916	0.94
8	13	5.9e-10	3.6e-06	26.3	15.5	1	18	922	939	922	940	0.97
9	13	0.95	5.8e+03	-3.1	0.5	6	10	969	973	968	975	0.80
10	13	2	1.2e+04	-8.1	12.3	9	18	986	996	976	997	0.73
11	13	1.6e-08	9.9e-05	21.7	10.6	1	17	1033	1049	1033	1055	0.89
12	13	2e-07	0.0012	18.3	14.5	1	19	1065	1084	1065	1084	0.97
13	13	0.66	4e+03	-2.6	0.1	8	12	1100	1104	1098	1104	0.84

Sequence Information

Coding Sequence: ATGTCATCAAACCCACAAGCGCCTATATTACAAATTTGTCAAGGTGGATTTGGAAGCGCCTTAAGTGGGGCCTTAACAAACAATATTggaacacaacaacaacttaaggATTCGTTTCAAGACAACGATTTCCCACAAtcgtttgaagaaaaaactatgAGCAATAACAACATTACGCCAGTTGGAGAATCTGTTGGAGGTGGTAGCAACAATTATGTTAATTTCACCCAATTCATAATGCAGCATAATTTATTGGGCAACAACAATTCATTTGGATCTAATGGAAGTGtaggtggtggcggcggcggcgtcgGCGGCGGTGACATTATGATTAataatagtagtgaaaatgttGGTGCAGTTGGCGGTGGAACACATGCAGCTGTTGCACAAGTTAATGCCAATGGTAGTTCGAGGGGCGTGGGTGGAGGTCATGGGTCTGAAGGTACCAAGAATGATTACTTCAATTTCGTCGATACAATGAGTAAGAAAGTGCAGAACAATTCTGCACGAGATAATATACAATTAGAAAATGGACAACAAACGTCGAATTTGTTTTCCAATAGTCTGTTTTCGCCATACAACAATAGTTTATATGCTAATAATGGTCCTAGTGTTGGCGGCTACAATAATTCATACAACAATACAAATacgaattttaattactttgatAATGTTTATACACCCTTTGGCAATAATGGTGGCTACTATATGAATCCCTTTGCCACTGGCTTCGATTTCACTTCGTCTAATTTACAAGCTTCAGCACCAGAATTTGTGCCACGATTCGGTAATCTTAGtttgaatgagaaaaaatttgaaaatactgaAGTGAATAACGTAAATAATGATTCAACggtaaataatatcaataaaagtgAACAGAGCAATGTCAACAAAGAACAACATATTGGTAACGAGGGAAATGATAAGAGAATATTGAATGGCATTGCTAACGGAGCAATTACCGTCAATAACGGTGAAACTAATGgtgttattaataatatttcgttAACCCAAGCAGctgataaaacaacaacaaatgttggTACGCCTACTTCCTCAAGTGCTGAACAACATGAAGTGAGAAACGAGAGAAATGAGAGAAAAGTTGCGCAAATTGTAGATTTTTCTggaaataaaagccaaaataatGGCACAAATGTAATTGCAAGCACTAATGTCTTTGATCTTGACTCAAATGAAGCTTCATCTACGAATGGCGGCAGCGCCACACGTTATACCGGCACAACTAATAAACAATATACTAATAACAACAATGGCGGCTCAAGAGGTTCGTCAGCAAATGGGTTTTCACGTAATCGTAACGATTACACTTCCTCACCACGCAATCACGAACGAAGTAGTGGTGCTGGCGGTTCTGTCAACGCCAAGTCCAACATGGATGGCATTGATAAGTCGGAGAAACCATCAGCACGTGCAGAGCGTGAACGTGAACGCGATCGTGATGCACGCCGATATCAAAGCGGGCGTCGCTCTGTCGATTACCACCGTAGTAATAAACGTCGCGATGATTGGAATCGAAACCGTGATCGTATAAATGGATTTCGTGTCGAAGAGAAATACTCAAACGATAATGGCAAGGATAGTCCATTACCATCACCCGAAAAGaAACTTTCACCGAAAAAAGTCTACCCCGAGAATGAAAAGTTGTCACAACGTGAAAAACTCATACGCGACATAGAGACGCGCCGCTTGGAGTGTCTAGTTTGTGTTGAGCTCATCAAAGCTCACCATGGTGTTTGGTCCTGTAACAATTGTTATCATATACTTCATCTGCAGTGCATCATTAAATGGGCTTCTTCATCAAAATCCGACGACGGTTGGCGTTGCCCTGCATGTCAAAATGTCGTTAAGGATGTTCCACGCGACTACTACTGCTTCTGTGGTAAAGTAAAGAATCCACCCTACACACGTCATGACATCGCACACTCTTGTGGCGACACCTGTGCGCGCGTCGAAGGCTGTGTACACGCTTGTACATTGCTCTGTCATCCTGGTCCATGTCCACCTTGTCAGGCTTATGTCAAACGCGAATGTGGCTGCGGtaagacaacaaaaacaatgcaatgcTGTGTGAAGGAAGCCATTGAATGCGACTCAACTTGTGGCAAGCTGTTGAATTGTGAGCTGCACACATGCCCTGCTAAATGTCACGATGGTAAGTGTGCACCATGCGCTGAGAAAGTAGACCAACAGTGTCACTGCACTAAACAGGAACGGCAAGTGGCTTGCACACGCGATTCGCACGACAAGCACAGTTATTCATGCGGCAAGCAGTGTGGCAAAGACTTGGCTTGTGGCAATCACAAGTGCAAGGATTGCTGCCATCCAGGTGAATGCCGCACGTGTAAGCTAAGTCCAGAAGTGGTCACCTCGTGCCCTTGCGGCAAAATGCCAATAGTTACGGGACAGAGAGAATCATGTTTGGATCCTATACCGGTATGTGAGGGCATTTGCAGCAAGACACTACGCTGTGGCAAGCCTGCACATCCTCATCACTGCACCAGCAAATGCCATTTGGGTAATTGCCCACCTTGTAATAAGCAGACCGCCGTAAAGTGCCGTTGCGGTCATATGGACCAATTAATCAAGTGCCGTCAACTGTCAACACGCGCCGATGATGCACGCTGCAAGAAGCGTTGTGTTAAAAAACGCTCATGCGGCAAGCACAAGTGTAATCAGGAATGTTGTATCGATATCGATCATATTTGCCCATTGCCTTGCAACTATACACTCTCATGCGGTAAACATAAATGCGATCAACCCTGCCATCGCGGTAATTGTCCACCTTGTTATCGCTCCTCCTTCGAGGAGCTCTATTGTGAGTGCGGTGCCGAAGTTATCTATCCACCAGTGCCTTGTGGCACCAAGAGACCAGCTTGCAAACGCCCTTGCTCACGTACACATCCCTGTCAACATCCACCACAGCACAACTGTCACTCGGCGGCCAATTGTCCGCCATGCATGATGTTCACTACGAAATGGTGTTTTGGTCAGCATGAACAACGTAAAACCATTCCATGTTCACAGGAGAGTTTCAGTTGCGGCCTAGCATGTGGCAAGCCTTTGTCGTGTGGCCGCCACAAGTGTATCAAGACATGTCATGAGGGTGCATGCCAGACGGCGGGTGAGGTGTGTAAACAAAACTGCACAAATCTACGTGCCACTTGCGGCCACAAATGTATGTCACCATGTCATGAAGGCGATTGCCCCGACACACCGTGCAAGGAGATGGTCGAAGTTCAATGTGAATGTGGCAATCGTAAGCAGATGCGTTTATGCCACGATCTAGCACGTGAATTCAGTCGCATTGCCACTGCCCAACTAGCCTCATCCATGGCTGAAATGCAACGTGGAAATTACATGGAACTAAGCGAAATACTCGCTCCCGTTAAGAttaataagacaaataaaacTTTGGATTGCAATGATGAATGTCGTCTGCTCGAACGCAATCGTCGCCTAGCTATTGGTCTACAAATCCGTAATCCTGATGTGCCGCAAAAACTACAAACCAAATATTCTGATTTTATACGCAATTTCGCAAAACGCGACCCCACACTGGTCAAATCTATACATGATGCACTTACAAATTTGGTAAAACTTGCTAAAGAGAGCAAACAAAAATCCCGTAGTCACTCTTTTCCCACCATGAATCGTGAGAAGCGTCAGTTGGTGCATGAGATGTGTGAAATGTTTGGAGTTGAATCGGTTGCCTACGATGCTGAACCCAATCGCAATGTGGTAGCTACTGCCTACAAGGAGAGGTCCTGGTTGCCAGCCACCAGCATTATGGAGGTTATGCAACGTGAATCCGGTCAACGTCGTGTACCGGTTCCGAGCAATAATGCCTGGGGCATTAAAAGATAG
Protein Sequence: MSSNPQAPILQICQGGFGSALSGALTNNIGTQQQLKDSFQDNDFPQSFEEKTMSNNNITPVGESVGGGSNNYVNFTQFIMQHNLLGNNNSFGSNGSVGGGGGGVGGGDIMINNSSENVGAVGGGTHAAVAQVNANGSSRGVGGGHGSEGTKNDYFNFVDTMSKKVQNNSARDNIQLENGQQTSNLFSNSLFSPYNNSLYANNGPSVGGYNNSYNNTNTNFNYFDNVYTPFGNNGGYYMNPFATGFDFTSSNLQASAPEFVPRFGNLSLNEKKFENTEVNNVNNDSTVNNINKSEQSNVNKEQHIGNEGNDKRILNGIANGAITVNNGETNGVINNISLTQAADKTTTNVGTPTSSSAEQHEVRNERNERKVAQIVDFSGNKSQNNGTNVIASTNVFDLDSNEASSTNGGSATRYTGTTNKQYTNNNNGGSRGSSANGFSRNRNDYTSSPRNHERSSGAGGSVNAKSNMDGIDKSEKPSARAERERERDRDARRYQSGRRSVDYHRSNKRRDDWNRNRDRINGFRVEEKYSNDNGKDSPLPSPEKKLSPKKVYPENEKLSQREKLIRDIETRRLECLVCVELIKAHHGVWSCNNCYHILHLQCIIKWASSSKSDDGWRCPACQNVVKDVPRDYYCFCGKVKNPPYTRHDIAHSCGDTCARVEGCVHACTLLCHPGPCPPCQAYVKRECGCGKTTKTMQCCVKEAIECDSTCGKLLNCELHTCPAKCHDGKCAPCAEKVDQQCHCTKQERQVACTRDSHDKHSYSCGKQCGKDLACGNHKCKDCCHPGECRTCKLSPEVVTSCPCGKMPIVTGQRESCLDPIPVCEGICSKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQLIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPACKRPCSRTHPCQHPPQHNCHSAANCPPCMMFTTKWCFGQHEQRKTIPCSQESFSCGLACGKPLSCGRHKCIKTCHEGACQTAGEVCKQNCTNLRATCGHKCMSPCHEGDCPDTPCKEMVEVQCECGNRKQMRLCHDLAREFSRIATAQLASSMAEMQRGNYMELSEILAPVKINKTNKTLDCNDECRLLERNRRLAIGLQIRNPDVPQKLQTKYSDFIRNFAKRDPTLVKSIHDALTNLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYKERSWLPATSIMEVMQRESGQRRVPVPSNNAWGIKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045917;
90% Identity: -
80% Identity: -