Basic Information

Insect: Ceratitis capitata
Gene Symbol: salm
Assembly: GCA_000347755.4
Location: NW:1548577-1578297[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5e-06 0.00025 20.8 0.9 1 23 637 659 637 659 0.98

2 7 9.9e-06 0.0005 19.8 2.1 1 23 665 687 665 687 0.98

3 7 0.017 0.85 9.7 1.5 2 23 1055 1076 1054 1076 0.98

4 7 7.1e-08 3.6e-06 26.6 0.5 1 23 1082 1104 1082 1104 0.98

5 7 0.00022 0.011 15.6 2.3 1 23 1114 1136 1114 1136 0.98

6 7 0.036 1.8 8.6 3.1 2 23 1583 1604 1582 1604 0.97

7 7 2.8e-08 1.4e-06 27.9 1.3 1 23 1610 1632 1610 1632 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5e-06	0.00025	20.8	0.9	1	23	637	659	637	659	0.98
2	7	9.9e-06	0.0005	19.8	2.1	1	23	665	687	665	687	0.98
3	7	0.017	0.85	9.7	1.5	2	23	1055	1076	1054	1076	0.98
4	7	7.1e-08	3.6e-06	26.6	0.5	1	23	1082	1104	1082	1104	0.98
5	7	0.00022	0.011	15.6	2.3	1	23	1114	1136	1114	1136	0.98
6	7	0.036	1.8	8.6	3.1	2	23	1583	1604	1582	1604	0.97
7	7	2.8e-08	1.4e-06	27.9	1.3	1	23	1610	1632	1610	1632	0.99

Sequence Information

Coding Sequence: atgaaaaatcatatATCAACTGTTTTGTGTGAAATGCGTAGTGATTTCAAAGATAATCATCAAGaaactattaataaaatgatacaaTTTGGCACCGTTAAATATGGAATCGTCAAACAGTTGAAAGATCGTGCGCGTAGCGCCGATAAAGCTTCCGATGATTCAAGCGATCAGGAGGAGAATGGTGCTTGCTGTTCGCCCATTGCCAGTGGCGAGTTGACAGCGTGCAATACagacacagcaacaacaacaaccgcaacaaTGCCAGCAGCAAGTTCACCGACGcataccaacaacagcagcagtacaGCAATTGGTAATGATTTGGCTGCGGAAGATTGCACACAAGGCGCTGCTGAtatggcagcagcaacaacaacagcgtcgGGTGAAGCGGCTGCCGCTGCGATGACCGAAGATCACAATCACAACAATACCAGCAACACCAGCGATAGCAACTGCAGCAGTAATAATGTTATACTGGCTGGTGGATCGCCAACACGACTGGAGCATGCGCACGGTGCGACGTCTGCGGACACGCGTctactaaaaatgaaatcactTAGCGATGTGGCGTTGGCATCTACGCCCGGCATGGAAGCTCGCGAATCAAGCATAGCGTCGGCAATTAGCCCTGCCAGCTCACCAGCATACAACACATATCCGACAGATAGCAGCTGCGtgactaacaacaacaaatttgcggCACCCACACCAATGGATATCGAGGAGGCTGACGCAGAAATTGCGGAGACTTTGGCGAAAGAGTGCACAGTAGACGAGAATGTTGGAGCGGAGGAAGATGGGGATGAAGACAAGCAGACCACTGCGGAGGCATCAGCCACAAGGAAGGCCGCAGCAGGTGTGAGCTCACCGACATCAAAGCCTAGTAGCAGTTTGGCAGCGAGTAATGCAGTTGCCGCTGCAAATGAACTGGCAGATGGTATTGAAAAAAGCACTTCCGCGCCGCTAACACCCACCTCAAGTGCGCTTGCAGCTGCGGCCAACGGCGCCGGACTGCCACaagctgctgccgccgccgcggCTTTTGGTACCGCGCCGGTTAATCTTGAAGCCATACAGAATATGCAAATGGCAATCGCGCAATTTGCTGCTAAGACAATAGCGAATGGCGCACAGGGCGGCGATAATGAGGCGGCCATGAAACAGTTGGCCTTCCTGCAGCAAGCGTTATTTAatttgcagcaacagcaactctTTCAAATACAACTTATCCAGCAGCTACAATCACAATTGGCATTGAATCAGCCGAAAGACGTTAGTGATGCTGGTGAGGGTGCGGAAGGTGGCGATCCTGATGATTTGGAAGACGAGCGTGAAGATGGCGAGGAGGATACGTATGAGGAGGAAGAGCGTATTGCTGAAATGGAGTTGCGTCAGAAGGCGGAGGCGCGCATGGCTGAGGCTAAAGCGCGTCAGCATCTCATTAACGCCGGCGTACCGCTGCGCGATGAAACGGAGAGCGGCAATCGTGCGGCAAGTGAAGCGTCGGTAGTACCAACAACAGGTACTTCAGTCGTTTTAGAGTCACTCAAACGTAAGCGTGAGGATGATGATGACGTCTTCGGCACGCCAACGAGCAGACGCATGAGCATGGAGATGGTGCATGGCAGCGCCACGCGACCAATGCCCTCACCATTGGATGCGTTGAGCAAATTGAAGGAGATGGAGAATATGCCACTGCCTTATGGTTCTGATCTCGCCTCGAGCATCATCACCAATCACGATGACCTGCCCGAGCCCAACTCACTGGAGATGCTGCAGAAACGTGCACAAGAGGTGCTGGACTCTGCCTCACAGGGCATACTCGCCAACAATATGGCTGACGAGTTTGCTTTCAGGGATAAGAATGGCGACGGCAAGAACCGTAATGAACCTTTCTTCAAACATCGCTGTCGTTACTGTGGCAAGGTGTTTGGTTCTGACTCGGCACTGCAGATACACATACGCTCGCATACTGGCGAACGACCATTCAAGTGTAACGTCTGCGGCAGTCGTTTCACCACCAAAGGTAATTTGAAGGTACATTTCCAGCGCCATGCACACAAGTTTCCTCACGTACCGATGAATGCCACACCCATACCTGAGCACTTGGACAAGTTCCACCCACCGTTGCTGGATCAAATGTCACCGGATAGCTCGCCCTCGCATACGCCTGCGGCGATGCCCCAGCAAATGCCGCAGCAGATGCCACCAGTGTCGCTGCCGTTGCcgtttccaactggcgccggATTTCCTGGCTTACCTGGTCTATATAGACCACCAATGGAGCTGCTGAAGTCATTGGGGAGTGCAGCAGGCTTCCCGAATCCCTTCTTTCAGCAAATGACGAGAGCTGCTGCAACCGAAACACACACTGAAGCGCCAACAACCCAAACTACATCCAAAGAAAGTAATCATGATTTGCCAACCGATTTACGCAAAACGTCGGCATCCAACTCACCCGAGTTACCAGTGAAGACTGAAATTACGGAGGAGAAGGACGATTCCACCTCCACACAGCAGGCGCCCGCACAGTCAACAGAGAGTCCGACGACGACTACAGTAACTGAAGCTCTAACACAGTCAACTACACCAGCTTTGGATATCAAAATTAAAGAGGAACGCATAGACACGGACTCGCAAGATGAGGAGATTCCTCGTGTGGATACGCCGACGCCTCAGTTAGCACCTTCGCCTGCGCCACGAAACAGTTTAACACCAACACATTCGTCCGTAAGCGCGCCCTTTACACCACCAACACCCACCTCAAAGCCATTGGTGCTGGCACCTGTCGTACAGCCCGCACAGCCACCCATCACAATGCATCCGCATCCCTCACCAGGTGCACACAATCATATCGATCATCTGCCCACGCCGGGACAGCTGCCGCCGTCTTTACATCATCGCGACGACTTCTTCGCAGAACGTTTCCCActgaattttaccaaaaatctcTCACCCGAACATCATTCGCCCATTCGTTCACCGGCGCACCTGCAACGTTCACCATTCTTCAATCCAATCAAACACGAGATGGCATTATTGCCGCGCCCTCACAGTAACGACAACTCGTGGGAGAATTTCATAGAGGTATCCAACACCTCCGAGACACTGAAGCTGAAGGAGCTAATGAAGAACAAGAAATTGACAGATCCGAATCAGTGTGTCGTTTGTGATCGTGTGCTGTCGTGTAAGAGTGCTCTGCAGATGCACTACCGAACACATACTGGTGAGCGGCCATTCAAGTGTCGCATTTGTGGACGCGCTTTTACCACCAAAGGCAATTTGAAGACCCACATGGCCGTGCACAAGATACGCCCACCCATGCGCAACTTCCACCAATGCCCTGTTTGTCATAAAAAATACTCGAATGCATTGGTACTGCAGCAGCATATACGCTTGCATACCGGCGAACCGACGGATTTGACGCCCGAACAAATACAGGCGGCCGAAATACGTGATCCACCGCCATCGATGATGCCGGGTGCCTTCATGAACCCTTTTGCGGCGGCTGCCTTTCATTTCGGTGCTATGCCAGGCGCGGCCATGGGGCATCATCTGGGACCCCACAACGGCACAATGGGCTCAGAGTCATCGCAGGGAGATATGGATGAAAATATCGATTGCGGTGATGACTACGACGATGACATCTCCTCCGAACACATGTCCAGCGCACACGATCTGGACGTGAGTGATCGGCCGAGATCGAGTGATGATTTCAAAGGTTTGCTCTTCGAACAAAAGTTGCGCATCGATGCCAGTGGCGTTGTGAATACCACACCACGTCCGCACTCCACCGCTAGCAATGCAAATTCGAATAACTCTGAGCCAAATAGCCCCAACTCCGCGCCACGTCACAGCTCGACACGCGCCAGCTCGCCGGCACGTTCCATGTCTGAGGCATCACAAGGCGCGTTAGACCTTACACCACGTGCACTGCCAATGCAAGGTAACAAAAGCAGCTCACAATCACCAGCGCCCACAACATCCACAGCACAGGCTGCCGGTCGCAAGACACCTATTTCGCCACCGCGTAATAGTAGCGCCAACAGCAGTGCGGCTAGAAGTCCCCACCCTGTGCCATCACAGAAACCACACCCGCAAATAAGCCCTGCGCTCACTTCACCGCTTGTACCCACCTCAGCGGTCGACTGCTTGCCCCCTGTGCTGCACCATCACTTAcaacagcagcaccaacaaTTGATGCAACAGCAAGCGGTTGCGGCGGCAGCAGCTCATGCTCAAGCACAGGCGCAACATCATCaccaacaattgcaacaacatgCCGTCGCTATGCATGCCGAGCAACTGCGGCGTGAGCACCAAATCAAACAGGAGCATGCGGTGCATCAGCATCACTTGCGTCAAcagcagcatcaacaccaacaacagcaagagcagCATCCATCGGCGCATTCACCCCATCAGTTAGCGTTGCCTCCACCGCCGCCGCATATCGCTCACCatctgcagcaacaacagcatcagGCAGCAGCCGCCGCGGCCGCCGcagcacaacagcaacaacaacagcagtcacCGGGGGCTATGCCACCACAAGGGCCACAACCACCAAATCCATTAGTCGCTGCGCGTCCACCATTCGGCATGTTTCCCAACTTGCCGCTCTTCCCGCCCGCCACAGCGCAAACGATGTGCTCGGCGATGAACACAATTGCGCAATCGGTAATGCCGGCGGCACCGTTCAATCCGCTTGCACTTTCCGGCGTGCGAGGAAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCTTGTCACTCAGCTTTAGAAATACACTATCGCAGCCACACCAAGGAACGACCATTCAAGTGTAACATCTGTGATCGCGGTTTCACCACCAAGGGCAACCTCAAACAACATATGCTGACACATAAGATACGTGATATGGAGCAGGAAACTTTCCGGAATCGTGCAGTAAAATGA
Protein Sequence: MKNHISTVLCEMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSADKASDDSSDQEENGACCSPIASGELTACNTDTATTTTATMPAASSPTHTNNSSSTAIGNDLAAEDCTQGAADMAAATTTASGEAAAAAMTEDHNHNNTSNTSDSNCSSNNVILAGGSPTRLEHAHGATSADTRLLKMKSLSDVALASTPGMEARESSIASAISPASSPAYNTYPTDSSCVTNNNKFAAPTPMDIEEADAEIAETLAKECTVDENVGAEEDGDEDKQTTAEASATRKAAAGVSSPTSKPSSSLAASNAVAAANELADGIEKSTSAPLTPTSSALAAAANGAGLPQAAAAAAAFGTAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNEAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLALNQPKDVSDAGEGAEGGDPDDLEDEREDGEEDTYEEEERIAEMELRQKAEARMAEAKARQHLINAGVPLRDETESGNRAASEASVVPTTGTSVVLESLKRKREDDDDVFGTPTSRRMSMEMVHGSATRPMPSPLDALSKLKEMENMPLPYGSDLASSIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFRDKNGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAAMPQQMPQQMPPVSLPLPFPTGAGFPGLPGLYRPPMELLKSLGSAAGFPNPFFQQMTRAAATETHTEAPTTQTTSKESNHDLPTDLRKTSASNSPELPVKTEITEEKDDSTSTQQAPAQSTESPTTTTVTEALTQSTTPALDIKIKEERIDTDSQDEEIPRVDTPTPQLAPSPAPRNSLTPTHSSVSAPFTPPTPTSKPLVLAPVVQPAQPPITMHPHPSPGAHNHIDHLPTPGQLPPSLHHRDDFFAERFPLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAAMGHHLGPHNGTMGSESSQGDMDENIDCGDDYDDDISSEHMSSAHDLDVSDRPRSSDDFKGLLFEQKLRIDASGVVNTTPRPHSTASNANSNNSEPNSPNSAPRHSSTRASSPARSMSEASQGALDLTPRALPMQGNKSSSQSPAPTTSTAQAAGRKTPISPPRNSSANSSAARSPHPVPSQKPHPQISPALTSPLVPTSAVDCLPPVLHHHLQQQHQQLMQQQAVAAAAAHAQAQAQHHHQQLQQHAVAMHAEQLRREHQIKQEHAVHQHHLRQQQHQHQQQQEQHPSAHSPHQLALPPPPPHIAHHLQQQQHQAAAAAAAAAQQQQQQQSPGAMPPQGPQPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045696;
90% Identity: -
80% Identity: -