Basic Information

Gene Symbol
Camta1
Assembly
GCA_000347755.4
Location
NW:2762303-2789120[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-18 1.8e-14 52.9 0.1 71 116 1 45 1 45 0.97
2 2 0.84 1e+04 -4.3 3.5 48 80 233 265 198 294 0.45

Sequence Information

Coding Sequence
ATGAAGCTAAAAGTGCAAGGAACGGAGTGTATCTACGGCTGCTATGTGCATTCGGCCATTCTACCAACTTTCCACCGCAGGTGCTACTGGCTGTTACAGAATCCAGACATAGTATTGGTACATTATCTGAATGTACCATATCCGGATGATAATAAAATGGCTGTTATTGCGCCGAGTATTACGCTCTGGGGTGATAAGAAGGAGTGGACCAAAGAGGAACTTGTCAATCAACTAAAACCCATGTTATCAACGGCTACTTCGGATGACGACTCTGATTCCGGCAATGATATAGAAATATCGACGGCTGAGACTGTTGAATCTTTAGTGTGTCAATTGATGGAAAAGCAGCGTTTGTCACGCCAAGCTGCTTTAGTCAAGCAGCTGGACTGCGGTTGCGGTGATGCTTCGTGTGCCGATGGAAAAACTTGCTCTCACCCAGTTATGCGGCGACCGACTTTATTAAAATCGGTTAGCGAGAAACGGCTTAGTATTGCCGATGGTTATGGAGCGGGCACGAGCGGTACGCCAAATGTAGTGATTGGCCAAAAGCTTTACTCGCGTTGGTCGGAACGTCGATTGCGTGATGCAAGTGATCAACAACATCATCAGTATCAGTATAGTCATCATCTGCAGCAGCAGACCTTGCCGCAGGAGTCGGCGattaaattccaaataattcCACCACAAAacaacgaacaacaacaacaacaagcttcctatcaacatcaacaacaacaacagcattatcGGCAGATGGCTGCTCGAAACAATAtgattttgcaacaacaacaacagcagcagcaacaacaactgcatcaccaccaacaacagcagcagcaacagcagcaatcaAATTTCAATCAAAGCTCATCAACAATTTCCAACAGCAATCATaacaatcaattaaatttgcaaCGATTTGTAGCTAATCACGTCAGCAACCACAACCACAGCAGTAGTAATAATGTCAGcaatggcaataataataataattcacttGTAAATCATCGATtacaaatagcaaaaacaacaataacagctacATCAGTAGCGGCGGCTGCTGCCGTTACTGCCAGTATTGAGCAACAAGGAGCCGGAGGTGGTGGTGTGATGGGTATGAATGAGGCTGAACTAATTGGAAACCCCAACCATATGCCCACAAATGCCCAACAGAGCAATGCCCATGGCAATCTCAACCGCAACGGTAGTCAATTAGTGTTGACACctcaccagcagcagcagcagcagcagcaacagcaaggcgcagtaaataataatagcaattaCAGCTTCAATaagcttcaacaacaacaacaacaaactgatGTATCCCCATCGTCTTCTACTTCTTCcacgcaacagcagcaacaacaagattTTTATAGCagactgcaacaacaacaacaacaacagcagcagcaacaacagaatCTACAAACAACGAATGACATAAATATGTCCTCCGTCTCCAATTCTTCCTCCCAATCTCCACAACCACAACAGCTACAGCAAATGCACCACCCACATGCGCATTTGCAATCACAAATGCACTCACACTCGCAACAAGCtaaccaacagcagcagctacggcagcagccacagcaagtacaacaacaagaacaatcaGCAAATACAACGACATTAAATATTTCCTCGACGACATTCTCGTCGTCATCATCGCCTTCATCGTCGTCATTGTCGAGAGTGGAGCCGATGTGTATGTCGCCTGAGCATCAGCCATCGACACCAGTAAGCCCAACAACACTAGGCTTAAGTAGTAATAAGGATCCtttacaacaacaccagcaggaaaaacaacagcaacagcagcaaaaacatAAAGAATTACATGTAGCTTCCTCGCCGACTACAACACCTTCAATTCAGTCGATTATGAATGATAATGTGGGTCATCATAAACAATCAGACATTGGCGGCGATACATTGTCTGCTGAGACCACAGGGgctgatgaaaatttaattggCGAACAGGTTGGTAGACTGGGCGAAGAATTGGCTGCGCCTACTGAGAGTGATGATACGGAGGAGATGTCACCCGGCGGTGATGGAAATCACACTATAAATActtccaaaaacaacaaccacaacaattgTAACGACAACAATCAAGTAACAGagtacaacagcagcagcactaCAGAAGGTTGTGTAAATATTGGTGCTTCCAACGATGGTGCCATTACGGTAAacaatgtacaacaacaacacggatCAACACATCCGAATTCCCATGAAAATTGTGAAACAGACCATCCaccacaacaacatcaacaatcaCATACAATTGATTTTGGATCGCTGGATCTGAACACCGATGGTAATGTTATCAATGGTCaacggcaacagcaacaccaacaccaacatgaacaacaacaacaacaatcagtttCACATTCCCCACACGATTTGAACGATTCATTGAGCTTCCTTAATGAGACACTTGATCTCTCGCAAGAGGACATACAACGCACGCTTATTGCGAATATGCCCTTCGGCGTGGCAAATCAGAAAGCTTCTTCGACTACGCCGGTCACGGCAGCGGAAGCTGCAGAGGCGCAAATATTGAGCTCCATCGATTTTTTGGAGGGCAATTGTGGTGGTCAGAGTGACGATGAAATTCTCGTGCCCGGCGTTACTTGTGAGGGTGATGACGAGGATGCTGACGATGTGTTTGCCAATTTGGATGCGTTCGACATGCTAGTCGAGTTCCCTGAACTGGATTTAGATGATAAACAAGCACTATCTAACGCGATTCATCAGCAACATCATCatacacagcagcagcaacaacaacaactgcaacaacaaaccAATATACACAGTCCATTGGAGCAGCTGAGCAATAACCAACCACAATGCGATACAACTTTGGCAAGCAACAAAAAGATACTAAACATTTGTGATTTCAGTCCCGAATGGGCATATACGGATGGTGGCGTCAAAGTGCTTGTAGTCGGCCCATGGACTAACAACGCGTCATACACTCTTCTTTTCGACGCACAACCAGTGCCGACACAGCTGATACAAGAAGGAGTTTTGCGATGCTGCTGTCCTCCACATGAGGCTGGCTTCGCTACACTGCAAGTGTCTTGTAACAATTTTATAATCTCCGACACAGTTTTATTCGAATACAAAACAACTCTGTGCCAAGAGCCACCCTTCGATGCGAATACAAACGATTGCCTGTACAAGTTCACATTACTTAACCGCTTGGCGttaattgatgaaaaaatgCAAGTAAAAGCGGAAGCAACTGCAACATTGtttgaacaGCAAACACTTTTACTACATAAGAATTTTGAAGAACAATTGGTTAGCTACTGCCAACAGCTAATGAAACGTGTTTGGCTTCAAAATGGCAATAACTGGAGTGGTGGCTTCAAGGGTATGACTCTGTTGCATCTAACAGCTGCATTAGGTTATTCCAAATTGGTTTGCGCTTTACTAAACTGGCGTTCTGAGAACCCGAATATCGTACTAGAGACTGAAATTGATGCACTGAGTCGAGATGTCTACGGTTATACACCAATGGCTTGGGCTTGCGCTTACAATCACTTGGAAATGGCTGTCATATTGTATAAGTGGAATCATAACGCCTTGAAGATTAAGGATAACGCTCACCAAACACCTTTAGACATTGCTCATTACAAGGGGCATAAAGTTCTTATGACGGAAATTTATCGCCTAGAAGAGGAACGGAAcacacaaaataagaaaaacacatTCGGCACTATATCGCTCAGCCTAAATAAATATGCTCAGCTAACGGGTGTACACTCAAAATCATTAAATTCCAACGAACAATTATATGATGTTAAAGACAACGAACATGTTTTCAACTCCTTAGAGGCCCTGGACATGCAACGCAGTCATGATGGTGTGTTCCTGCGCCCAGTAGCAGTAGCAAGCAATCAAAGCCCACCCAATGCTAGTCGTTTCTCGAAACGATCGTCTGTGGATAGCGGCATTAACATGGACATTCGAACGAAGTCAGGAAAATCTTTCAAAGATGTTCCGCGCTTGCAAAGtTTCGAATCACATGACAATTTCAATTTGGCCGTGGAATCATCTCTCGATGCTTTGGCTGCAACGAATACAACGAATATACTGCTGTCGCCTACACGTAAAATGGACTTTGCGTTGTgCGAGGTATCAACTGGCGATTCAAGTCCTTTACCCGACAAAGATCACGATGATACATCAACGATCAATAATGATGATGTAAACGATGTGACTATAAATAATGAGAACGATGGTATTGTAGGGGATTCTGATGCCAAAGTACTGACCTTGGCCGAGCATATCATCGCAGCTATGCCCGAGCACATTAAGAATGAAGCCGATGAGATGATGGTGTTAGGTAGTCCCTTAACGGAACCGCTTAATTCTGATTCGCCAAGCTTAAATAACGGCTTTATGGATCCGCTTGATTCTCTGCCTAACACACATTTTGAAAGCTTCGATTTCAATGATCACAGCTATCGCTATCACGATGTTAGTACACCGTGCTCTAGTCTCAGCCCGGCGAGTTCGGGGCCATTGCAATCACCAGCTAGTTACTCCATACTGGGCGCCGATCCAACGGTTAGTTCACCAAGCCCGCCGCCATCTACAAAGCAGTTGACCGAATTTTTACATGCCTCTAGTAATAGCCAATATCCATTTGAAGCAGATTTCTCCAAACTAACTTTAACAGACACGGAGCAACGTGAATTGTATGAGGCAGCGAAATGTATACAGAAAGCATATCGTTCATACAAGGGCCGTCAGAAGTTGGAGGAACAGAATAAGGAGCGTACCGCTGCCATTGTTATACAGAATTATTATCGCCGCTACAAGCAGTATGCATACTATCGTCAGATGACAAATGCCGCTCTCGTCATTCAACACGGCTATCGCTCGTATTGTCGCAATAAACGTTTCAAGAAATCACAATCCTCCATGTCCACGGGCATTGATTTGTCTGCTGGCGACAGTCAAAGCAGTCCAACTTCGCAATGTTTATCCAGTTTCTACGATCATTTCCGTAAcgaccagcaacagcaacaacagcaacaccttGAATTCAATTCTCAGCCGAACACACCAAAGGAGACTAGTCCATCTGGTCCATTAAAgcGTACTTATTCACAATCAACACAAAATCAGGCAGCCAGAAAAATTCAACAGTTCATGAGACAATCACGGATTAAcATTTGGGATGGAAATTTAACAACCTTGACTGCAGAGAGAACGAGCAGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAGCTTGCAGTATCAAGAACAACCGGAAATTGTCTGCCCACTCGAAAAAAATGA
Protein Sequence
MKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVNQLKPMLSTATSDDDSDSGNDIEISTAETVESLVCQLMEKQRLSRQAALVKQLDCGCGDASCADGKTCSHPVMRRPTLLKSVSEKRLSIADGYGAGTSGTPNVVIGQKLYSRWSERRLRDASDQQHHQYQYSHHLQQQTLPQESAIKFQIIPPQNNEQQQQQASYQHQQQQQHYRQMAARNNMILQQQQQQQQQQLHHHQQQQQQQQQSNFNQSSSTISNSNHNNQLNLQRFVANHVSNHNHSSSNNVSNGNNNNNSLVNHRLQIAKTTITATSVAAAAAVTASIEQQGAGGGGVMGMNEAELIGNPNHMPTNAQQSNAHGNLNRNGSQLVLTPHQQQQQQQQQQGAVNNNSNYSFNKLQQQQQQTDVSPSSSTSSTQQQQQQDFYSRLQQQQQQQQQQQQNLQTTNDINMSSVSNSSSQSPQPQQLQQMHHPHAHLQSQMHSHSQQANQQQQLRQQPQQVQQQEQSANTTTLNISSTTFSSSSSPSSSSLSRVEPMCMSPEHQPSTPVSPTTLGLSSNKDPLQQHQQEKQQQQQQKHKELHVASSPTTTPSIQSIMNDNVGHHKQSDIGGDTLSAETTGADENLIGEQVGRLGEELAAPTESDDTEEMSPGGDGNHTINTSKNNNHNNCNDNNQVTEYNSSSTTEGCVNIGASNDGAITVNNVQQQHGSTHPNSHENCETDHPPQQHQQSHTIDFGSLDLNTDGNVINGQRQQQHQHQHEQQQQQSVSHSPHDLNDSLSFLNETLDLSQEDIQRTLIANMPFGVANQKASSTTPVTAAEAAEAQILSSIDFLEGNCGGQSDDEILVPGVTCEGDDEDADDVFANLDAFDMLVEFPELDLDDKQALSNAIHQQHHHTQQQQQQQLQQQTNIHSPLEQLSNNQPQCDTTLASNKKILNICDFSPEWAYTDGGVKVLVVGPWTNNASYTLLFDAQPVPTQLIQEGVLRCCCPPHEAGFATLQVSCNNFIISDTVLFEYKTTLCQEPPFDANTNDCLYKFTLLNRLALIDEKMQVKAEATATLFEQQTLLLHKNFEEQLVSYCQQLMKRVWLQNGNNWSGGFKGMTLLHLTAALGYSKLVCALLNWRSENPNIVLETEIDALSRDVYGYTPMAWACAYNHLEMAVILYKWNHNALKIKDNAHQTPLDIAHYKGHKVLMTEIYRLEEERNTQNKKNTFGTISLSLNKYAQLTGVHSKSLNSNEQLYDVKDNEHVFNSLEALDMQRSHDGVFLRPVAVASNQSPPNASRFSKRSSVDSGINMDIRTKSGKSFKDVPRLQSFESHDNFNLAVESSLDALAATNTTNILLSPTRKMDFALCEVSTGDSSPLPDKDHDDTSTINNDDVNDVTINNENDGIVGDSDAKVLTLAEHIIAAMPEHIKNEADEMMVLGSPLTEPLNSDSPSLNNGFMDPLDSLPNTHFESFDFNDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGADPTVSSPSPPPSTKQLTEFLHASSNSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYCRNKRFKKSQSSMSTGIDLSAGDSQSSPTSQCLSSFYDHFRNDQQQQQQQHLEFNSQPNTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRINIWDGNLTTLTAERTSRKREAGAPTQGGIPSKLAVSRTTGNCLPTRKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01045458;
90% Identity
iTF_01045458;
80% Identity
-