Ccap004908.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratitis capitata
Gene Symbol
SMARCC2
Assembly
GCA_000347755.4
Location
NW:167182-176961[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1 1.3e+03 -0.9 0.1 34 43 203 212 202 214 0.85
2 2 5.7e-15 6.4e-12 44.9 0.2 3 44 652 693 650 695 0.95

Sequence Information

Coding Sequence
ATGAATACATTGGGTCCTAAAAAGGACGGTAGTCCTAATGTGGAATTTTTCCAATCGCCGGAATCGTTGCAAGGATTTGAAACAATTCGCTTGTGGTTacagaaaaattgtaagaaaTATTTAGCGAATAACACGGAAACAATTACTCGAGAATCACTGGCTCAgctattaatacaatttttgcagTATGTAGAAGCTAAATTGGGCAAAAATGCACAGGAACCACCGGCAACTCGCCTGCCTATGCGTTTATTCATGGATTTCAAACCTGGTGGTGGACTGTGTGTCATATTTAGCACAATGTTTCGGTTTCGCGCAGAACAACGCGgaaagaaatttgatttttctgtgGGAAAAAACCCTCCTCGCAAAGATCCCAACATTCAATTGCTGATTGATATCGAACAAGCTCTCGTTGAAGCAAATCTTTACCGCattcattacatatatatacgcccTGAAGTAAATAAAGAATTGGCACAAAAGCTGCGGGATATTTTACTTACCAGACGTGTGGAAATTGTAACTGACGAGGACGAAGCCACACATATTATATACCCAGTTGTCGATCCCCACCCAGATGAATATGCACGTCCCGTTTTCAAACGTGGGAATCATGTTATGTTACATTGGTATTATTTTCCCGAATCGTATGATTCTTGGGCTATAAACTCATTTGATTTGCCTGACTATGTACCAGAAAATCCCGAACAACAATCTGAAGGATGGTTAGTTTCGGCCAGTTGGGTCTTAGATCTAGAGCAGTATAATGAATGGATGGTTGAAGAAGACTATGAAGTAGATGAAACAgggaaaaagaaaacacataagCACCGAATGTCCGTTGATGACATTATGTCTCTGAGTACAGATGAAAAAAAGCGTGGACCGGGCAGCAGCGGCACCTCTACCAAGCAAAAACGGCGCCGTTCACCTTCACCTAATACTTCAAAGCCTGGTAAGCGTAAACGTTCACCAGCTGTATTACACAAGAAAGTACGCAATGACGAGGATGATGAAGACTTAACTCGTGATATGGACGATCCACCTGCAGAGCCAAACGTACAAGAAGTAGTAAAGTCATCAACTTTGCAATCAACAGCTAGCCCAGCACCTGGTGGTAAATCTCGTGCCGATAATGATATGATGCCAATTAaagGGGGCACCATGACAGATTTAGATGATGAAATGACAGGCGGCAGCGCGGTACAGGCACTTTCCACAGGTGATGGCGAAAATTCACAAACTGGCAAAACAAGCGATAACAGTAATACTCAGGAATTTTCTTCCTCTGCTAAAGAAGATATGGAGGACAACGTAACTGAGCAAACTCATCATATTATCGTGCCATCATACTCAGCATGGTTCGACTACAATTCTATACATGTTATTGAAAAACGTGCAATGTCTGAGTTTTTCAatggtaaaaataaatctaaaacacCGGAAATTTATATGGCCTATCGAAATTTTATGATAGATACCTACAGattaaatCCAACTGAGTACTTAACCAGCACCGCTTGTCGCCGGAATCTAGCTGGAGATGTTTGCGCAATAATGCGTGTACATGCTTTCTTAGAACAGTGGGGTCTCATTAACTACCAGATAGACGCTGAGTTAAGACCAACTCCAATGGGTCCGCCACCAACatctcattttcatattttatctgACACCCCTTCTGGTTTGCAATCTTTGAACCCACAGAAAACGCAACAACCATCAGCAGCAAAGGCATTGCTCGACTTGGACAAGCCTAAAGTGTTGAAGGACGGTAAAGAAGGTTCTATAGAGGGTGACAAACCTGCTTTATTACCTGGTGGTATTAGCATTAAAAGTGAAACTTTGGAAAATGGAACCAATACAGGTCAACAATTCGGCCTAAAACTTGACCAATATGCAAAGAAGCCGGCGGCAATGAAAAATCGAACTGCTGCTAGTATGGCACGAGAGTGGACTGATCAGGAAACATTGCTTTTGCTTGAAGGTCTGGAAATGCATAAGGATGATTGGAATAAAGTTTGCGAGCATGTGGGTACCCGTACTCAAGACGAGTGTATACTACATTTTCTAAGGCTACCGATTGAAGACCCCTACTTGGAAGATGATGGTGGATTTTTGGGACCATTGGGTTGCCAACCGATACCATTTAGTAAATCTGGCAATCCCATCATGTCGACAGTTGCATTCCTAGCATCAGTAGTTGATCCTCGCGTTGCGGCAGCTGCAGCTAAGGCTGCTATGGAAGAATTTGCTGCAATAAAGgaCGAAGTACCCGCTACCATAATGGATAATCATATGAAGAACGTGGAAAAGGCTTCAGCTGGAGGTAAATTTAATCCAAGTTTTGGTCTCTCTAACAGTGGCATAGCAGGCACAGGAGCAgacaaagaagaggaagacgCTCATGCTGCAGGAACTGGTGCAGCTGCCATTCCAGTGAACACAGATGGTACTGAAATCAAAACGGAAGATACCAAGGACACAGAGGCAAACTCAAAGGACTCGGAAGTTGCTAAGCAGCAAGTTTTCAACGAGGCGAATGTTCAAACCGCTGCAGCCGCAGCCTTAGCCTCGGCTGCTGTTAAAGCTAAACATTTAGCCGCATTGGaagaacgaaaaataaaatcactggTTGCGTTGCTGGTTGAGACACAAATGAAGaagttagaaataaaattgCGCCATTTTGAAGAACTTGAAACAACAATGGAGCGCGAACGTGAAGGATTGGAGTATCAGCGGCAACAACTCATTACCGAACGACAGCAATTCCATTTGGAGCAATTAAAAGCTGCGGAGTTCCGTGCACGTCAACAAGCACATCATCGCCttcaacaagaacaacaatggCAAGGTACTACTGGCGCAAGCACCACAGGTGCTGGCCCTCAAGCCGGAAATTCTAGTGCTCCTCTCGGTAGCGGCGGAAACGCACCTGCCGGCCAAGGTCAAACAATTAATTCTGGCACATCTAACACTGGCGCCGCCAGCGTATCTCCAACAGCTGGTGTTAATAGTGTCGGACCACAAGGCTCAGCTGCGACCAGCCAAGGCGCAACCACACAAGCATCTGTTGCAAATTCACAACAAGCCGTCACGGCTCCTCTCGGCGTGGCTAGTGCAGCACCAGTATccgtacaacaacaaataccaatTCCAATGGACACTTCATCAAACACTTCAATGCCGCTACCAAATACACCTGGAGATGGCGCAACAGTCACTGGACAGACAATTTTGTCACCTGCAAATATACCAACCAGTGCACCAGTGGCACCATCTGCTAATGTTCAGCCGCCAAATCTACCAGCAAACATTCCTCCAATTGGCGTGCCACCGGCAGTACCACCATCATAA
Protein Sequence
MNTLGPKKDGSPNVEFFQSPESLQGFETIRLWLQKNCKKYLANNTETITRESLAQLLIQFLQYVEAKLGKNAQEPPATRLPMRLFMDFKPGGGLCVIFSTMFRFRAEQRGKKFDFSVGKNPPRKDPNIQLLIDIEQALVEANLYRIHYIYIRPEVNKELAQKLRDILLTRRVEIVTDEDEATHIIYPVVDPHPDEYARPVFKRGNHVMLHWYYFPESYDSWAINSFDLPDYVPENPEQQSEGWLVSASWVLDLEQYNEWMVEEDYEVDETGKKKTHKHRMSVDDIMSLSTDEKKRGPGSSGTSTKQKRRRSPSPNTSKPGKRKRSPAVLHKKVRNDEDDEDLTRDMDDPPAEPNVQEVVKSSTLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAVQALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKALLDLDKPKVLKDGKEGSIEGDKPALLPGGISIKSETLENGTNTGQQFGLKLDQYAKKPAAMKNRTAASMAREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKFNPSFGLSNSGIAGTGADKEEEDAHAAGTGAAAIPVNTDGTEIKTEDTKDTEANSKDSEVAKQQVFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGTTGASTTGAGPQAGNSSAPLGSGGNAPAGQGQTINSGTSNTGAASVSPTAGVNSVGPQGSAATSQGATTQASVANSQQAVTAPLGVASAAPVSVQQQIPIPMDTSSNTSMPLPNTPGDGATVTGQTILSPANIPTSAPVAPSANVQPPNLPANIPPIGVPPAVPPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01189365;
90% Identity
iTF_01045400;
80% Identity
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