Ccap001945.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- basR
- Assembly
- GCA_000347755.4
- Location
- NW:273788-276897[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.017 19 4.9 0.1 18 46 218 248 205 248 0.76 2 5 5.5e-11 6.1e-08 32.1 0.3 1 43 254 297 254 299 0.93 3 5 3.1e-07 0.00034 20.1 0.1 2 46 309 357 309 357 0.92 4 5 1.1e-09 1.2e-06 28.0 0.0 2 46 364 409 363 409 0.92 5 5 1.2e-09 1.3e-06 27.9 0.1 3 45 417 460 416 461 0.95
Sequence Information
- Coding Sequence
- ATGAATTCTTTTAATGGCGGTGACTCCTCTGCAGAAGATGGTAGCGTTGACAATTGGACAGATTCTGAGGCAGATGAGGAGTCCAACAACGACTACACTGCCTTCAACGCCAGGTACATGgatgaaattacaaatattctCAGCTTCAACAATCAGGTTAATTGCGACAATGCTTTGGAATTAAATAAGGAAATGCAACAGCGATTACAAGAAGTGCGAAAACGTTTGCAAAGTCTTCTGCATTCGGTGCAAGAGCGATACCTTTTAAACGAGCAACGTTTAAAgttaaatgtagaaaaaaaacaaaaagggttTGGAATGCGCGGAGCATATCTCAAAGGAGGGACCTTCTTTTTCAAAggaaatatgtttttcaaaGATCTTAAATGCCGAAATTGCCCAAATAATCAGGACTATGAGCATCGCAGGAATATTGAAGGAGAAATGTTTCCTATGGACTTTGAGCTATGTAGCCGTCATGTTTGGTCTTTGATTGATAAACAGGCCGTGGTGCAAGCTGTAAAAGAGCAGGTCATTGATTATTTAACTGATCGCAAATTCCGtgataaaaatagcaaaataaaaagggtTCAATTAGATATACAAGTGCATACAGAGAAATTGGCCAATCTTCTTACACAAGTGGACGAGAAGTTTGAAATAGACTGGGAGCAAGTTTCAGCTCATAACTTAAAATATCGACACTCACCCAGCAGTTGCAAGGCTATGTGGCAAGTATACTTGCATCCCTCTCTCAAACGAAGTGCATGGACTGATGAAGAGAATAAACGACTCTTACATATAGCACAAAAGCATAATTACCAAAACTGGGAGAGTATTGCAAAATCAGTAACGAAACGTTCTGACTATCAATGCTTTATTCAGTATCAGACGTCCGTTTGTTTTATGGATACACAACGTTGGGGACGCTGGGATAAACGTGATGACAAAAAGCTTCTCGAATTAATTCTGAAAAAAACGATAAACGGTGTTATAGATTGGAATGCAGTAGCTTCTTATTTTCCACATAAACCGAAAAAATCACTCCATCAGCGTTACATATACTACTTGGATCCAAAGATAAGTCATGAACCATTTACAGCCGAAGAAgatcttattttattagctGCAGTAGAAGAATATggtgaaaaatttgcattatttccGCGTACACTTTTTCCAAATCGTTCTATAACCCAGCTTCGAATGCGTTACAAGAACACACTTCAAACGCGTCATATGCTAACACCCTGGTCAGTAGAGGACGATAAGAAACTTATGGAATTTATTTCCGAACACGGCACATCAGCTTGGTTGCGTTGTGCTGAATCACTTGGCAATCACAATCGTATTAGCTGTCGTACACGCTTCCTTACTATAAAGAAGTTTTTTGAGAAGAATCCTGAAGCGACAATCGATGACATTCctagaaaaaaaacttgtataatGAAGAATAGTGTTATTACAAAGCAAAACTGGGTAGATAAGGTTGCAGAGCTGCGAGAGAACCCCGATACCGTGCTTGTACCTATGAACCGtagatttaaacaaaataaaaataagaaagtaaagaTTAAAAAAGGGGAATTACTTTCACCGGAGGGTCCACCAAAATGTACGGTGCAATCTGCAAGGGTGATAGAGGTGAAAAATCGGAAACAACCATATGTAGAACGTTTGCGTGCTGTTGAACAAAAGCTCTATCATTTCTTTAAGTATACATACAATTTCAAACTAGGCACTGATGTGTGCAACAAAGCACCAAATCAATTCTTGCGTATAGTATCAAAAATGCTCGTTTTTAAAGCGGATCCAACACGACCCTATATTGCAGATAATATACTGTCTCATTATATAGGGAGACGTTGCAAATTTCACCTACAGCACGAAAGTCTAACAACGAGCGATGACTGTAGTAAACCCTTCAACTGTACACTACCGCCAAGCTGGTCTACAGCAATGGGATTCCGGGCACTTTGCGTGCAATCTGCAGAATCGCAAATAGAGGATTTAAGAAATGATAATGCGGAGGAGCGAAAGCCAAGTGAATTTGACAGAAGCTTGGCGGTGCAGCGATTCCGTAAACGAATGCATACTTTATTTTACCAAACAGCCTTATTGAGTCGTTTGGAACCCGCGCATTTTACAGAACTAACAAAAATCCCAGCGCCACCGCCAACATTTACGACTGTAACAGATTTGACGCCTGAAGACTTCTTCGAAGATACCAGCACTTCCGTCGTTGAAAATGAAGCAGAAGTAccaatatttgatttgaatcGGGTGAAAACGGAGGAACCATCCGAATATGCGGCCAACAGCGAATCAACCTCGAAAAAGCAATGTAAGCAAGGGAGGCCAACCAAATTGAatagtagaaaaagaaaaatgaaaacattaccTGTAGCAACACAACGCGCAGCAGTCAAGTATACTGGAAACGGGGTTGGGCTGGAGGACAATGCAACTGGCTCGACTTACAAATCGCCAGAAACGCAACCAATTCTGCATTTGCATAACATCAAACAAGAGTGTCAAGCGCACACCGCTCTGTTGCAGCAATGTTCACTGCACACACCGTCGGAAGAACCCGCAGAGAAACGCGTTTACGTTGATACAAATTGTAATAGATCGGATGTTAGTTCGCCAACTATAAAGACTGAATTTGAACTGTAG
- Protein Sequence
- MNSFNGGDSSAEDGSVDNWTDSEADEESNNDYTAFNARYMDEITNILSFNNQVNCDNALELNKEMQQRLQEVRKRLQSLLHSVQERYLLNEQRLKLNVEKKQKGFGMRGAYLKGGTFFFKGNMFFKDLKCRNCPNNQDYEHRRNIEGEMFPMDFELCSRHVWSLIDKQAVVQAVKEQVIDYLTDRKFRDKNSKIKRVQLDIQVHTEKLANLLTQVDEKFEIDWEQVSAHNLKYRHSPSSCKAMWQVYLHPSLKRSAWTDEENKRLLHIAQKHNYQNWESIAKSVTKRSDYQCFIQYQTSVCFMDTQRWGRWDKRDDKKLLELILKKTINGVIDWNAVASYFPHKPKKSLHQRYIYYLDPKISHEPFTAEEDLILLAAVEEYGEKFALFPRTLFPNRSITQLRMRYKNTLQTRHMLTPWSVEDDKKLMEFISEHGTSAWLRCAESLGNHNRISCRTRFLTIKKFFEKNPEATIDDIPRKKTCIMKNSVITKQNWVDKVAELRENPDTVLVPMNRRFKQNKNKKVKIKKGELLSPEGPPKCTVQSARVIEVKNRKQPYVERLRAVEQKLYHFFKYTYNFKLGTDVCNKAPNQFLRIVSKMLVFKADPTRPYIADNILSHYIGRRCKFHLQHESLTTSDDCSKPFNCTLPPSWSTAMGFRALCVQSAESQIEDLRNDNAEERKPSEFDRSLAVQRFRKRMHTLFYQTALLSRLEPAHFTELTKIPAPPPTFTTVTDLTPEDFFEDTSTSVVENEAEVPIFDLNRVKTEEPSEYAANSESTSKKQCKQGRPTKLNSRKRKMKTLPVATQRAAVKYTGNGVGLEDNATGSTYKSPETQPILHLHNIKQECQAHTALLQQCSLHTPSEEPAEKRVYVDTNCNRSDVSSPTIKTEFEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045397;
- 90% Identity
- -
- 80% Identity
- -