Basic Information

Insect: Ceratitis capitata
Gene Symbol: bab2
Assembly: GCA_000347755.4
Location: NW:1695505-1783871[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-17 2.2e-14 52.3 0.0 1 43 790 833 790 835 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-17	2.2e-14	52.3	0.0	1	43	790	833	790	835	0.95

Sequence Information

Coding Sequence: ATGGATATGACAAAAGACATTATAGACTACACACAAAAACACGCTACAGACACAGCAGAGCGGCTGATCGCCAGCTATCAGTCACCACTGTCCGAGATCAGTGAGAACGAGGCAAACACACGCGCATGCGCTGCAGCATCACCCTTTCATGCGGGCAGCAATATTATGGACGCCAAAATTAACACACCAACAGCAGCATCGTATAATGAGAGAGCTTCTACtatcaacaataataacaatacaacaactaGTGGAATTCCAATGGGCGCAGAACAATGCGAGCAACAGACGCGCCCACTTGAAACAACACAAGCAGACGCCGCTGTACAGCAGCCCAGGGAAGAGTTAAATGATACAGTTGCTGCTGTGGaggatgaaataaaagctattgCGTCGCAACCACCGAAGACTGTGGGCGCCGCCGTGGTGAGTGGTGACTTAACACCGCCACCACGCCCCTTCACCACTAGTGAGGTGGTGGGCATGAGTTCGGCACTCGATGATGATCCCGATTTGCATGTCGACATACAAATGCCCAAATCGCGTTCGTTACCCACTTCGCCCGATCATCATAGGCATAGCTTGGACTCAGCATCGGCAGATATTTTGACACGCATGAATGCGGCGCTTTTTGAATTTGAGCAGCGGCGTGGCTTAGATACAGCACTGCATGCGCCCTTCGCTGCTGACATGTCGGCACCAATGCGCATCTCGAAGTTGTCGAAGTCGTCATTGTCTGCCGGCGCACCACTCACAGCAAGTAAGCCCATTTCACCGCTGGGCTTGAAGTCCAAAAAACAGTTGGCTGCTGCAGCAGCGGTGgcaacaaacacacagcaacaacaattctgTTTACGCTGGAATAACTACCAAACAAACTTGACAAATGTCTTTGACGAACTGTTGCAGAATGAGTCCTTTGTCGATGTAACGCTTGCCTGCGAGGGACAATCCATTAAGGCACACAAGATGGTGCTCTCCGCCTGCTCGCCCTACTTTCAGGCGCTTTTCTACGATAATCCATGCCAGCATCCGATTATCATCATGCGCGATGTGCGGTGGGAGGAGCTGAAGGCTATAATGGAATTTATGTATAAGGGTGAGATCAATGTAAGTCAAGAGCAGATTAATCCATTACTGAAAGTTGCCGAAATGCTGAAAATACGTGGCTTGGCGGAGGTGAGTGCAGGAGGTGGCCACGGTGGCATGGCCGCACCACATCCCATGATGCCCGAACAACGCATGACTATATTCGACGAAGAGGATGACGTAGAGAGCGATGAGGAAGGTGCCGAAGATGGCTGCCAGAAACCAAAACGCGCACGCATGCTCGACCCTACACTCGGCAAAACCTTTCCACATGCAGCTGTGCTCGATTTGAACTTGGCTGCACAGCGTCAGCGAAAACGCTCGAGAGAAGGCTTTTTCACCGAAAACAATATGTCACGCTTTGGCATCAGTACAACAATGCACACAGCAGGTGACAATGCGGAAACCAACTCGCAGGTTGCCATTGCAACAAATGGCACCGCCGCTGATACCGCCTCACAACCGCCACCCGTTGCCATGACCACTTCGACTATTGTACGTAATCCATTTGCTTCACCAAACCCTAATCCCAATCATAATGCCGGAGCAGCTAGCaccaatcaaaataatatacagtCCGCCACTGCAACACCTACTGCCCCCTCAGCGGTCGCTtcatcaacaccaacaccacaCGGCAGCGCTACACCGACTGCACCAGATACGCCCACATCGCATGCCACTGCTCACTCATATCGTCCGCCATCCATGCCGTCGGCTAACAGCCTCAAAGGCGCTATGTCTtctccagcagcagcagcagcagcagcagctagcGGTATCCCCTTGAATGTACATTCCCATCCAGTGGCCGCGGCGGCAGCAGCTGCTGCATTGGGCGTTAATCCGCATCATCCACATCATcctcaccatcatcatcatcatgccGCGGCAGCCGCTCAACAGTTAGCTGCTCAGCATCAATTGCATGCAGCGGCTCATTCGCATGCGGCTATGGCCTCTGCTCTAGGCGCTTCATTGGCTGCTGGTACCGGTCCTGGGGGCGCAGGCGCGAGTGGTGCACCAAATATGCCCCCGTCGATGGGTCATCATGATGAGTTGGAGATCAAGCCGGAAATTGCCGAGATGATACGCGAGGAAGAGAGGgCCAAAATGATTGAAAGCGGACATCCGTGGATGGGTGGTGCATCGACGTCTTCCGTTACCGACAGTTACCAATACCAATTGCAATCGATGTGGCAAAAATGTTGGAACACAAATCAACAAAATCTCGTACAACAATTGCGCTTTCGCGAGCGTGGGCCACTGAAGTCGTGGCGTCCCGAAGCAATGGCCGAAGCTATATTCAGTGTGTTAAAAGAAGGTCTTTCGCTATCACAAGCTGCACGCAAATACGATATTCCTTACCCAACATTCGTGTTGTATGCCAATCGCGTGCATAATATGTTGGGACCCTCACTGGATGGTGGCACCGATCCGCGTCCGAAGGCACGTGGTAGGCCGCAACGTATTCTGTTGGGCATGTGGCCGGAGGAGTTGATACGTTCCGTTATTAAAGCTGTCGTGTTTAGGGATTATCGCGAGATCAAAGAGGATTTGGCACATATTTATGCGAATGGACAAATGCAAGCGGGCTCCCCTTTTAGTGCTGCTGGTAATGCTGCTGTCGCCGCAGCCGCCGCCAACGGTTACCACAACGCCGCTAAATTAGCCGCCCAAAACGCCGCACTGGCACCACCCGACTCGCCCAGTCCACTCTCGACGATGACCGAAACTTTGCGCCGTCAAATCATgtcccaacaacaacaatcacccATTTCACAAACAATGAATATGTACAAATCGCCAGCCTATCTCCAGCGTTCGGAAATCGAAGATCAAGTATCGGCAGCGAATGCCAAACAGCATGCCGAAGCGCGACGCGCCTCCGATAGTATGGCCGATTTGAGCGCGTTGGGCGGCTTAATGGGCATACCCGGACTGAATGTGATGCCCACACAAGCGCAAGCGGCGGCTGCGTCGCGTGCTAGTCAAATGCACCAAAGCGGTGGCGGTGTTGGCGCTAGCTATGCACGCGAACGTGAAcgcgagagagagagggagcgcGAGCGTGAGCGAGAGAGAGAACGTGAACGTGAACGGGAGCGTGAACTGAAAGAAGCCATGCAAGCACGTCAATATGGCAATCAATCTCGTGGCTCCATTGGTACGCCCAGCGGTAGTAGCGGCCAAAAGATGCCAGGCACAGCGGCTGCGGCTGCTGCCGCCACTGATTCCGCAGCGGCAGCTGCTTATGCGCACTACAAGAACAAAGAGCAGGCGAGTAATTATGCATTCAATAAGCGTTTCGCTGAAGCAATGCCGCCCGGCATTGACTTTGAAGCGATCGCTAATGGTTTGCTACAGAAATCGGTGAACAAAAGTCCGCGTTTTGAGGATTTCTTCCCCAGCGAATTCTTTGGTAATGCCGACAGTGCTGCCAGCGGTGGCGCTTCTTATCCGCCCACGCGGGAATCgcctttaatgaaaattaagttgGAGCATCAGGCGAGTGCTGAGGTGCCGCATGAAGATTAG
Protein Sequence: MDMTKDIIDYTQKHATDTAERLIASYQSPLSEISENEANTRACAAASPFHAGSNIMDAKINTPTAASYNERASTINNNNNTTTSGIPMGAEQCEQQTRPLETTQADAAVQQPREELNDTVAAVEDEIKAIASQPPKTVGAAVVSGDLTPPPRPFTTSEVVGMSSALDDDPDLHVDIQMPKSRSLPTSPDHHRHSLDSASADILTRMNAALFEFEQRRGLDTALHAPFAADMSAPMRISKLSKSSLSAGAPLTASKPISPLGLKSKKQLAAAAAVATNTQQQQFCLRWNNYQTNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVRWEELKAIMEFMYKGEINVSQEQINPLLKVAEMLKIRGLAEVSAGGGHGGMAAPHPMMPEQRMTIFDEEDDVESDEEGAEDGCQKPKRARMLDPTLGKTFPHAAVLDLNLAAQRQRKRSREGFFTENNMSRFGISTTMHTAGDNAETNSQVAIATNGTAADTASQPPPVAMTTSTIVRNPFASPNPNPNHNAGAASTNQNNIQSATATPTAPSAVASSTPTPHGSATPTAPDTPTSHATAHSYRPPSMPSANSLKGAMSSPAAAAAAAASGIPLNVHSHPVAAAAAAAALGVNPHHPHHPHHHHHHAAAAAQQLAAQHQLHAAAHSHAAMASALGASLAAGTGPGGAGASGAPNMPPSMGHHDELEIKPEIAEMIREEERAKMIESGHPWMGGASTSSVTDSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDLAHIYANGQMQAGSPFSAAGNAAVAAAAANGYHNAAKLAAQNAALAPPDSPSPLSTMTETLRRQIMSQQQQSPISQTMNMYKSPAYLQRSEIEDQVSAANAKQHAEARRASDSMADLSALGGLMGIPGLNVMPTQAQAAAASRASQMHQSGGGVGASYARERERERERERERERERERERERERELKEAMQARQYGNQSRGSIGTPSGSSGQKMPGTAAAAAAATDSAAAAAYAHYKNKEQASNYAFNKRFAEAMPPGIDFEAIANGLLQKSVNKSPRFEDFFPSEFFGNADSAASGGASYPPTRESPLMKIKLEHQASAEVPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00191287;
90% Identity: iTF_00303875;
80% Identity: iTF_00303875;