Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_000347755.4
Location
NW:3223-74656[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5 2.5e+03 -2.3 0.0 2 21 536 555 535 555 0.81
2 3 4.9 8.5e+03 -4.0 0.4 5 18 874 887 873 888 0.78
3 3 2.3e-18 4e-15 54.7 0.0 1 43 1060 1103 1060 1105 0.95

Sequence Information

Coding Sequence
ATGGAACGCATGAAATGGAAGCAATACCAAGAGCCATTAACTACGCGCGCCCATACAAATCACACAGCCGTACAATCGCCTGCCGAGACAGCAGCCACAGCCGACTTACCACCAGCAACCGCTGCCACCAGTTCAGCAGCGACCTCAGTAGCAATCCCAGAAATCCCAGTagcaccacaacagcagcagACAGCAGCCACCGAGCACAGTTCAAAGATAACCGATCGGCAGCAGCATCACAGCCCCAGCGTTCAGTGTGTAGAGGAAGAGACGAAGAAAACTTCATTTTCACCGCAACGATCGGCAGTGATCAACGATCTCGCCGACGTCAAGTGTGCAGCGAATCAAGCGCTAAGCGGCAAGAGCAACGGCATTGCAAcggacagcaacaacagcacgaGCCAACACGAGCTATCACAAGAACGCATAGTCGAAGgtcaacaaccacaacaacaatacaaaggAAATACGCATCAAACCAATTGCGTGGAAGATTCCATTAAGGGTAAGGAGGGATCGGAAGAGAAGCAGAAGGTGCAAGCTGTTACAGACAACACGACAACATCACATAATCACAAACAACTTCaccacaacaacagtaatagtttagtgttaaataataactttaacaACACATCAGCATCtacaacaaaagtaacaaattcATCACACGAAATTACGTCAATAAACATCACAAGCGATATCGACTTGTCAACTACATCACCACCGTCAAAACATCCTCCtcaaccagcagcagcagcagctaagGCGCACAGCGTGCACACCGTTCAACCGGTCGATTGGAAACCGAATGAGAAGTGTTATTTTTGTGTGGACGGCAGATTACTCACGGTGAACGCGAAGGGCGAATTAGTAGCCGAGCCGGCGGGCCCTCTAGTGTCCGCCGTCGGCGGCGATCCAGTGGAACACGGTCAAAGGCTTGAGACCGATAGCGATTCCAATGAATCATCCCATGTGAACTCATTAaacagtacaacaacaacaacaacaagaacagcagcagcaactggaGCTATAGTTAACCCCCTCACACATACCAATACAAATAACAGTACCAGCAACAATAccaacagtaacagcaacaaccactacaacaataacaacaatcgcATCAACTGGAACAAATTGCTGACGACACGTTTGGTCGACTTGCCGGCGAACATGACTTCAATGGACTCAATGGCCGCACAATTAGCAGTCATTTCTGGTTACCCAAATTTCAATTGGCTACAATtgatgcaacaacagcagcaacaacaacaacagccgcatTCAACACCTACCacgcagcaacagcaacaagaacagacacatccacaacaacagcaggagcagcgacagcagcaacaacaacaacaacagcctcCAACAAATTCGGCGACACCAACTACCTCAGAGACATCGGCCGCCGCTGTTAGTCCACCACTCAAGGATTCGCCCAGTCCCAGTGATGCCACCGGCGAACAACCATTAGATCTTAGTTCCAAGCCATCGCCAAATTCATCAATTAGCGGCGATTTGAAAACAGTACGTACCAAAACGATGCGTACGACGCCCGTAATCTCTTCACGCCGCCCCTACACCGATGATGCTCTTAGCAGCGTGGTACAGGACATACTCAGTGGCAAATATAGTGCACGAAAACAGCCAGATCAATACACCAACAATTCAAGTGTGAGTCCCGCACGCGTGAGATCGAGTCGACCCATGATGAGTGGCAGCAAGCGCAGCAATGCCCACCTGGCGAGCGCGCTCTTGCAGGGCGTGGATGTGGACAAGGACCTGTCTGGTGATGAATACATGAGTACAGGAGATGGCGCAACAGGAGGCGGTCATGGTAGTAATGCCTCCACGCCACAACCAGAACCCGCCGTGCCCTCTGCGCTGGAAGAGCTCGCTGCTCGTCTCAGTGCGACGCATTCCCTacgaaaattttgtgtaaataacgGCGCAGGCAGTGATTTGGCACGTCGCGATGGCGCTAATGATGCCTCAAACTGCACGGACTTATCACCAAAGGGCAGCGCGTTATGTGACGCAGGCACCCCCTCAAGCAGCGCTACGCCGCAGCCACAGCAATCACCACCCGCCACTGGGTTGGACACTACATTTGCGATTTTGCAGGCATTCCTTTTTACACTCACCAGTTTTGGAGCTTTGCAGCAGCGTGCAGATCAGCCAATTACATTGCGTGATCTGGTGGATAATTTGAAGGATATGCTGGATACCGCGGGTGATTTGAATGTAGCAGGGCTTTTCAATAATGGTAAACCTAACATCTTGGATCAGCCGCTGTTGGCACAAAAGTTGCAGCAACAGACGTCTGCGTATACGACGCAACGCTTGCCTAAATCAGACACGCCAGAGACAACTAGTTCTATGGACAACCATGAGCCGATGGCTGACGAACTTGCTGCGTCGATTCTCAAGATTCCGTCCTACAAACCAGTGGCAGGCACACCCACTCCCACATCGGGTTCAGCACGCGCCTCGTGCTCACCGTCTTTGCTATGCAACAATTCCACCGCCAACTCAATGCCAAATCCCAATGGCGATAGTCCGCATTCCGCACCCTCACCACGCATCGCCAACTCAATGTTGGCTGCTGCTGTGGCGGCCGCGAGCAACAATGGCACCTCCTCCTCCGTCGGTCGGCAGAGCAATGATCTTGCAGTCATCTCGCCACCCTTAATGCAACACCGCCAATCACCACCGTCGTTCAGCTTTCGTGATGTAATCGCGCGTGGTATACACCGCACCATGAATGAGCAAGCCAACCAGGAGGCGCATGCGGCGGCAGCTGCTGTGGCTGCAGCTTCAGCACCCATGTTGGGCTTGTGTCTGGATATGGAGCGTCCAACTAATAACAACAGCGTTGGTGGCACGGATCACAAAAAGCCAACCATATCGGTGGTAAAGAATATTGGTGGAACCGACACAACCCGTTTTGGCGCCGCCCCTAATGTGCTGGATGGTTCCGCTGGTGCTGGCGTGCCTGGCGGCAGTGCAAGTTCGCATAACTCCCACGGCTATCATCATCAAGCGCATATGCATAGTACCCATCACCACCTTGCACATCACCTTAGTCGTCAAGAAGCAGCAGCACTAGCCGCCGGCAAAGGCACACGACCCAAGCGTGGTAAGTACCGCAACTATGACCGAGATAGTTTGATTGAGGCGGTGCGTGCGGTACAGCGTGGTGAGATGTCAGTTCATCGGGCGGGCAGCTACTTTGGTGTGCCACACTCCACACTCGAGTACAAAGTTAAAGAGCGACATCTCATGCGACCACGCAAGCGTGAACCTAAACCACAACCCGGTCTAGATGGCAGCTCAACTTCGAGCAAAACCAACTCTAACATTCCCGGGCATCacaataatctaaataaaatgaaattaggtGGCGCCGGCGGCAGTGGCTCCAACTCTAAACTCAGCGAAACACTTAAAGGCAGTAACAACTCAGCATCTGCTGCATTTCCCGCTGCCGCTCCGAACGGCATGAAATTGCCCATCTTCGATCCCATCCAATACCCGGCACACCTCTTTTGGAATCATTCGCCGGCGGTGGCCTTCAGTCAAATGCAAATGGAACTCAACCGGAATGCAGTAGCAGCCCAAAGTGCCAGTGCTGTCAATGCGGCCCAGCGCTACACTGAGGAAGCTCTTCGTGGCAGTGGCGGCGGTTCGGCGGGCACACCGTCAAATGCCAACAGCCCCAGTCCTATCGCCAGTCCGCTGTCTGCTGTGGCCGGTCACACACTCAATATGAAGAGCGCGCGCGAACTTGCCGAAAATTTGTACGAAAGCGGTGGCGCCAATGGTTCCTCAATACTCGACGGCATCATACGAAAAACACTCGATCGCAAAAGCACCGATGTTTGCCCGCCCGCCAGCGCCAGCCCCGGTGGCGCGTTGCTTGATCAGCTGTTGGTAAAGAAAAGTACGCTGCCACCATACGTGAGCAACAACACCGGCAGTGGCGACCATCACATGTCAGCCGCGGTGATGAACAGCTTGCGTGCTAAGCGTCCCGGCAGTCCACTGAACTACACGGAGATCAAACGCGAACGTGGCAGTCCGCAACAAAGCAgtggcgacgacgacgacgatgacgacgcCTCACGCAGCGGCAACGAGGAAAGTAGTTATgagcacaataacaacaacaataacaagagtaGTTACAGCGGCAATCACGAGCTACAGCTGCAGCCGCATTCACATCAACACCAGCACTTACACCACCAACAGCGCAGTCGAAGCCGCAGTCGTCTAACCTCACACGACTCCGCTGAAACCGACACCAACAGCATACCCAGCGAACTCATGTCGAATCACACGAGTGCCAACAAATCCGTGATCGATCTCAATGGCAATGGCAGTAGCGCGGCTGTGGGTATGAGTGGCATGGTGCCGAAAGCGGAACCACTGATTGAATTGGCACATACGGCACCTACGCTGGGCGGCACATCAATACTCCAAGAGAAGTTGGCGCAAATCAAAGCAGAGCAAGAAAATGAGGAGAATTTATAG
Protein Sequence
MERMKWKQYQEPLTTRAHTNHTAVQSPAETAATADLPPATAATSSAATSVAIPEIPVAPQQQQTAATEHSSKITDRQQHHSPSVQCVEEETKKTSFSPQRSAVINDLADVKCAANQALSGKSNGIATDSNNSTSQHELSQERIVEGQQPQQQYKGNTHQTNCVEDSIKGKEGSEEKQKVQAVTDNTTTSHNHKQLHHNNSNSLVLNNNFNNTSASTTKVTNSSHEITSINITSDIDLSTTSPPSKHPPQPAAAAAKAHSVHTVQPVDWKPNEKCYFCVDGRLLTVNAKGELVAEPAGPLVSAVGGDPVEHGQRLETDSDSNESSHVNSLNSTTTTTTRTAAATGAIVNPLTHTNTNNSTSNNTNSNSNNHYNNNNNRINWNKLLTTRLVDLPANMTSMDSMAAQLAVISGYPNFNWLQLMQQQQQQQQQPHSTPTTQQQQQEQTHPQQQQEQRQQQQQQQQPPTNSATPTTSETSAAAVSPPLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKTVRTKTMRTTPVISSRRPYTDDALSSVVQDILSGKYSARKQPDQYTNNSSVSPARVRSSRPMMSGSKRSNAHLASALLQGVDVDKDLSGDEYMSTGDGATGGGHGSNASTPQPEPAVPSALEELAARLSATHSLRKFCVNNGAGSDLARRDGANDASNCTDLSPKGSALCDAGTPSSSATPQPQQSPPATGLDTTFAILQAFLFTLTSFGALQQRADQPITLRDLVDNLKDMLDTAGDLNVAGLFNNGKPNILDQPLLAQKLQQQTSAYTTQRLPKSDTPETTSSMDNHEPMADELAASILKIPSYKPVAGTPTPTSGSARASCSPSLLCNNSTANSMPNPNGDSPHSAPSPRIANSMLAAAVAAASNNGTSSSVGRQSNDLAVISPPLMQHRQSPPSFSFRDVIARGIHRTMNEQANQEAHAAAAAVAAASAPMLGLCLDMERPTNNNSVGGTDHKKPTISVVKNIGGTDTTRFGAAPNVLDGSAGAGVPGGSASSHNSHGYHHQAHMHSTHHHLAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSTSSKTNSNIPGHHNNLNKMKLGGAGGSGSNSKLSETLKGSNNSASAAFPAAAPNGMKLPIFDPIQYPAHLFWNHSPAVAFSQMQMELNRNAVAAQSASAVNAAQRYTEEALRGSGGGSAGTPSNANSPSPIASPLSAVAGHTLNMKSARELAENLYESGGANGSSILDGIIRKTLDRKSTDVCPPASASPGGALLDQLLVKKSTLPPYVSNNTGSGDHHMSAAVMNSLRAKRPGSPLNYTEIKRERGSPQQSSGDDDDDDDASRSGNEESSYEHNNNNNNKSSYSGNHELQLQPHSHQHQHLHHQQRSRSRSRLTSHDSAETDTNSIPSELMSNHTSANKSVIDLNGNGSSAAVGMSGMVPKAEPLIELAHTAPTLGGTSILQEKLAQIKAEQENEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-