Ccap009217.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000347755.4
- Location
- NW:3223-74656[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 2.5e+03 -2.3 0.0 2 21 536 555 535 555 0.81 2 3 4.9 8.5e+03 -4.0 0.4 5 18 874 887 873 888 0.78 3 3 2.3e-18 4e-15 54.7 0.0 1 43 1060 1103 1060 1105 0.95
Sequence Information
- Coding Sequence
- ATGGAACGCATGAAATGGAAGCAATACCAAGAGCCATTAACTACGCGCGCCCATACAAATCACACAGCCGTACAATCGCCTGCCGAGACAGCAGCCACAGCCGACTTACCACCAGCAACCGCTGCCACCAGTTCAGCAGCGACCTCAGTAGCAATCCCAGAAATCCCAGTagcaccacaacagcagcagACAGCAGCCACCGAGCACAGTTCAAAGATAACCGATCGGCAGCAGCATCACAGCCCCAGCGTTCAGTGTGTAGAGGAAGAGACGAAGAAAACTTCATTTTCACCGCAACGATCGGCAGTGATCAACGATCTCGCCGACGTCAAGTGTGCAGCGAATCAAGCGCTAAGCGGCAAGAGCAACGGCATTGCAAcggacagcaacaacagcacgaGCCAACACGAGCTATCACAAGAACGCATAGTCGAAGgtcaacaaccacaacaacaatacaaaggAAATACGCATCAAACCAATTGCGTGGAAGATTCCATTAAGGGTAAGGAGGGATCGGAAGAGAAGCAGAAGGTGCAAGCTGTTACAGACAACACGACAACATCACATAATCACAAACAACTTCaccacaacaacagtaatagtttagtgttaaataataactttaacaACACATCAGCATCtacaacaaaagtaacaaattcATCACACGAAATTACGTCAATAAACATCACAAGCGATATCGACTTGTCAACTACATCACCACCGTCAAAACATCCTCCtcaaccagcagcagcagcagctaagGCGCACAGCGTGCACACCGTTCAACCGGTCGATTGGAAACCGAATGAGAAGTGTTATTTTTGTGTGGACGGCAGATTACTCACGGTGAACGCGAAGGGCGAATTAGTAGCCGAGCCGGCGGGCCCTCTAGTGTCCGCCGTCGGCGGCGATCCAGTGGAACACGGTCAAAGGCTTGAGACCGATAGCGATTCCAATGAATCATCCCATGTGAACTCATTAaacagtacaacaacaacaacaacaagaacagcagcagcaactggaGCTATAGTTAACCCCCTCACACATACCAATACAAATAACAGTACCAGCAACAATAccaacagtaacagcaacaaccactacaacaataacaacaatcgcATCAACTGGAACAAATTGCTGACGACACGTTTGGTCGACTTGCCGGCGAACATGACTTCAATGGACTCAATGGCCGCACAATTAGCAGTCATTTCTGGTTACCCAAATTTCAATTGGCTACAATtgatgcaacaacagcagcaacaacaacaacagccgcatTCAACACCTACCacgcagcaacagcaacaagaacagacacatccacaacaacagcaggagcagcgacagcagcaacaacaacaacaacagcctcCAACAAATTCGGCGACACCAACTACCTCAGAGACATCGGCCGCCGCTGTTAGTCCACCACTCAAGGATTCGCCCAGTCCCAGTGATGCCACCGGCGAACAACCATTAGATCTTAGTTCCAAGCCATCGCCAAATTCATCAATTAGCGGCGATTTGAAAACAGTACGTACCAAAACGATGCGTACGACGCCCGTAATCTCTTCACGCCGCCCCTACACCGATGATGCTCTTAGCAGCGTGGTACAGGACATACTCAGTGGCAAATATAGTGCACGAAAACAGCCAGATCAATACACCAACAATTCAAGTGTGAGTCCCGCACGCGTGAGATCGAGTCGACCCATGATGAGTGGCAGCAAGCGCAGCAATGCCCACCTGGCGAGCGCGCTCTTGCAGGGCGTGGATGTGGACAAGGACCTGTCTGGTGATGAATACATGAGTACAGGAGATGGCGCAACAGGAGGCGGTCATGGTAGTAATGCCTCCACGCCACAACCAGAACCCGCCGTGCCCTCTGCGCTGGAAGAGCTCGCTGCTCGTCTCAGTGCGACGCATTCCCTacgaaaattttgtgtaaataacgGCGCAGGCAGTGATTTGGCACGTCGCGATGGCGCTAATGATGCCTCAAACTGCACGGACTTATCACCAAAGGGCAGCGCGTTATGTGACGCAGGCACCCCCTCAAGCAGCGCTACGCCGCAGCCACAGCAATCACCACCCGCCACTGGGTTGGACACTACATTTGCGATTTTGCAGGCATTCCTTTTTACACTCACCAGTTTTGGAGCTTTGCAGCAGCGTGCAGATCAGCCAATTACATTGCGTGATCTGGTGGATAATTTGAAGGATATGCTGGATACCGCGGGTGATTTGAATGTAGCAGGGCTTTTCAATAATGGTAAACCTAACATCTTGGATCAGCCGCTGTTGGCACAAAAGTTGCAGCAACAGACGTCTGCGTATACGACGCAACGCTTGCCTAAATCAGACACGCCAGAGACAACTAGTTCTATGGACAACCATGAGCCGATGGCTGACGAACTTGCTGCGTCGATTCTCAAGATTCCGTCCTACAAACCAGTGGCAGGCACACCCACTCCCACATCGGGTTCAGCACGCGCCTCGTGCTCACCGTCTTTGCTATGCAACAATTCCACCGCCAACTCAATGCCAAATCCCAATGGCGATAGTCCGCATTCCGCACCCTCACCACGCATCGCCAACTCAATGTTGGCTGCTGCTGTGGCGGCCGCGAGCAACAATGGCACCTCCTCCTCCGTCGGTCGGCAGAGCAATGATCTTGCAGTCATCTCGCCACCCTTAATGCAACACCGCCAATCACCACCGTCGTTCAGCTTTCGTGATGTAATCGCGCGTGGTATACACCGCACCATGAATGAGCAAGCCAACCAGGAGGCGCATGCGGCGGCAGCTGCTGTGGCTGCAGCTTCAGCACCCATGTTGGGCTTGTGTCTGGATATGGAGCGTCCAACTAATAACAACAGCGTTGGTGGCACGGATCACAAAAAGCCAACCATATCGGTGGTAAAGAATATTGGTGGAACCGACACAACCCGTTTTGGCGCCGCCCCTAATGTGCTGGATGGTTCCGCTGGTGCTGGCGTGCCTGGCGGCAGTGCAAGTTCGCATAACTCCCACGGCTATCATCATCAAGCGCATATGCATAGTACCCATCACCACCTTGCACATCACCTTAGTCGTCAAGAAGCAGCAGCACTAGCCGCCGGCAAAGGCACACGACCCAAGCGTGGTAAGTACCGCAACTATGACCGAGATAGTTTGATTGAGGCGGTGCGTGCGGTACAGCGTGGTGAGATGTCAGTTCATCGGGCGGGCAGCTACTTTGGTGTGCCACACTCCACACTCGAGTACAAAGTTAAAGAGCGACATCTCATGCGACCACGCAAGCGTGAACCTAAACCACAACCCGGTCTAGATGGCAGCTCAACTTCGAGCAAAACCAACTCTAACATTCCCGGGCATCacaataatctaaataaaatgaaattaggtGGCGCCGGCGGCAGTGGCTCCAACTCTAAACTCAGCGAAACACTTAAAGGCAGTAACAACTCAGCATCTGCTGCATTTCCCGCTGCCGCTCCGAACGGCATGAAATTGCCCATCTTCGATCCCATCCAATACCCGGCACACCTCTTTTGGAATCATTCGCCGGCGGTGGCCTTCAGTCAAATGCAAATGGAACTCAACCGGAATGCAGTAGCAGCCCAAAGTGCCAGTGCTGTCAATGCGGCCCAGCGCTACACTGAGGAAGCTCTTCGTGGCAGTGGCGGCGGTTCGGCGGGCACACCGTCAAATGCCAACAGCCCCAGTCCTATCGCCAGTCCGCTGTCTGCTGTGGCCGGTCACACACTCAATATGAAGAGCGCGCGCGAACTTGCCGAAAATTTGTACGAAAGCGGTGGCGCCAATGGTTCCTCAATACTCGACGGCATCATACGAAAAACACTCGATCGCAAAAGCACCGATGTTTGCCCGCCCGCCAGCGCCAGCCCCGGTGGCGCGTTGCTTGATCAGCTGTTGGTAAAGAAAAGTACGCTGCCACCATACGTGAGCAACAACACCGGCAGTGGCGACCATCACATGTCAGCCGCGGTGATGAACAGCTTGCGTGCTAAGCGTCCCGGCAGTCCACTGAACTACACGGAGATCAAACGCGAACGTGGCAGTCCGCAACAAAGCAgtggcgacgacgacgacgatgacgacgcCTCACGCAGCGGCAACGAGGAAAGTAGTTATgagcacaataacaacaacaataacaagagtaGTTACAGCGGCAATCACGAGCTACAGCTGCAGCCGCATTCACATCAACACCAGCACTTACACCACCAACAGCGCAGTCGAAGCCGCAGTCGTCTAACCTCACACGACTCCGCTGAAACCGACACCAACAGCATACCCAGCGAACTCATGTCGAATCACACGAGTGCCAACAAATCCGTGATCGATCTCAATGGCAATGGCAGTAGCGCGGCTGTGGGTATGAGTGGCATGGTGCCGAAAGCGGAACCACTGATTGAATTGGCACATACGGCACCTACGCTGGGCGGCACATCAATACTCCAAGAGAAGTTGGCGCAAATCAAAGCAGAGCAAGAAAATGAGGAGAATTTATAG
- Protein Sequence
- MERMKWKQYQEPLTTRAHTNHTAVQSPAETAATADLPPATAATSSAATSVAIPEIPVAPQQQQTAATEHSSKITDRQQHHSPSVQCVEEETKKTSFSPQRSAVINDLADVKCAANQALSGKSNGIATDSNNSTSQHELSQERIVEGQQPQQQYKGNTHQTNCVEDSIKGKEGSEEKQKVQAVTDNTTTSHNHKQLHHNNSNSLVLNNNFNNTSASTTKVTNSSHEITSINITSDIDLSTTSPPSKHPPQPAAAAAKAHSVHTVQPVDWKPNEKCYFCVDGRLLTVNAKGELVAEPAGPLVSAVGGDPVEHGQRLETDSDSNESSHVNSLNSTTTTTTRTAAATGAIVNPLTHTNTNNSTSNNTNSNSNNHYNNNNNRINWNKLLTTRLVDLPANMTSMDSMAAQLAVISGYPNFNWLQLMQQQQQQQQQPHSTPTTQQQQQEQTHPQQQQEQRQQQQQQQQPPTNSATPTTSETSAAAVSPPLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKTVRTKTMRTTPVISSRRPYTDDALSSVVQDILSGKYSARKQPDQYTNNSSVSPARVRSSRPMMSGSKRSNAHLASALLQGVDVDKDLSGDEYMSTGDGATGGGHGSNASTPQPEPAVPSALEELAARLSATHSLRKFCVNNGAGSDLARRDGANDASNCTDLSPKGSALCDAGTPSSSATPQPQQSPPATGLDTTFAILQAFLFTLTSFGALQQRADQPITLRDLVDNLKDMLDTAGDLNVAGLFNNGKPNILDQPLLAQKLQQQTSAYTTQRLPKSDTPETTSSMDNHEPMADELAASILKIPSYKPVAGTPTPTSGSARASCSPSLLCNNSTANSMPNPNGDSPHSAPSPRIANSMLAAAVAAASNNGTSSSVGRQSNDLAVISPPLMQHRQSPPSFSFRDVIARGIHRTMNEQANQEAHAAAAAVAAASAPMLGLCLDMERPTNNNSVGGTDHKKPTISVVKNIGGTDTTRFGAAPNVLDGSAGAGVPGGSASSHNSHGYHHQAHMHSTHHHLAHHLSRQEAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSTSSKTNSNIPGHHNNLNKMKLGGAGGSGSNSKLSETLKGSNNSASAAFPAAAPNGMKLPIFDPIQYPAHLFWNHSPAVAFSQMQMELNRNAVAAQSASAVNAAQRYTEEALRGSGGGSAGTPSNANSPSPIASPLSAVAGHTLNMKSARELAENLYESGGANGSSILDGIIRKTLDRKSTDVCPPASASPGGALLDQLLVKKSTLPPYVSNNTGSGDHHMSAAVMNSLRAKRPGSPLNYTEIKRERGSPQQSSGDDDDDDDASRSGNEESSYEHNNNNNNKSSYSGNHELQLQPHSHQHQHLHHQQRSRSRSRLTSHDSAETDTNSIPSELMSNHTSANKSVIDLNGNGSSAAVGMSGMVPKAEPLIELAHTAPTLGGTSILQEKLAQIKAEQENEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -