Ccap000243.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- kn
- Assembly
- GCA_000347755.4
- Location
- NW:2703054-2789704[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-234 1e-229 763.1 0.0 10 385 19 410 10 413 0.98 2 2 9.1e-10 1.1e-05 23.4 7.2 421 484 412 480 409 492 0.74
Sequence Information
- Coding Sequence
- ATGTTTGGCCTGCCACCCACAGCGGCGGATATGAATCAACCGCGCGGTCCCATGACATCACTGAAAGAGGAGCCGTTGGGTGCGCGCGCCTGGATGCAGCCGGTCATTGATCATAGCAATTTGGGTATTGGTCGCGCACACTTTGAGAAGCAGCCACCAAGTAATTTGCGTAaatcaaatttctttcattttgtcatTGCGTTGTATGATCGTGCCGGTCAACCGATTGAAATTGAACGTACAGCTTTTATAGGCTTTATTGAAAAGGATTCAGAATCGGATGCGACTAAAACGAATAATGGCATACAATATCGACTGCAGTTGCTCTATGCGAATGGTGCGCGTCAGGAGCAGGACATATTCGTGCGACTCATCGATTCGGTGACAAAGCAGGCGATTATTTACGAAGGGCAAGATAAAAATCCGGAAATGTGTCGAGTATTGTTAACGCATGAGGTTATGTGCAGtCGCTGTTGTGATAAAAAAAGTTGTGGCAACCGCAATGAGACACCATCAGATCCTGTCATTATTGATCGatttttcctgaaattctttttgaaatGCAATCAAAACTGTCTAAAAAATGCCGGTAATCCCAGAGATATGAGACGCTTTCAGGTGGTTGTCTCCACACAGGTAACCGTTGATGGTCCACTACTGGCTATATCCGataatatgtttgtacacaACAATTCGAAGCATGGACGGCGTGCTAAGCGTTTGGATACCACGGAAGGTACAGGAAACTCCTCACTGTCCTTAACGGGTCACCCACTTGCGCCTGACAGTACCTATGATGGTCTCTATCCACCATTACCTGTGGCCACACCCTGCATCAAAGCGATTTCACCCAGCGAGGGTTGGACCTCCGGTGGAGCAACAGTCGTTATTATTGGTGATAATTTCTTTGATGGCCTCCAAGTTGTCTTCGGCACAATGCTCGTTTGGAGCGAGTTGATAACATCGCATGCCATTCGTGTGCAAACACCACCACGCCATATGCCCGGGGTCGTGGAGGTGACTTTGTCGTATAAGAGTAAACAATTTTGCAAGGGTTCGCCGGGAcgttttgtatatgtttCGCTCAACGAGCCCACCATCGATTACGGTTTTCAACGTCTACACAAATTGGTGCCACGTCATCCTGGTGATCCGGAGAAATTGCAAAAGGAAATTATACTCAAACGTGCCGCCGATTTAGTAGAAGCACTGTACTCCATGCCAAGATCTCCCAGCGGTTCGACTGGCTTCAATTCATACACCGGCCAACTGGCTGTTAGCGTTCAGGACACGGCCGGCCAATGGACTGAGGATGATTATCAACGCGCCCAATCGAGTAGCGTGAGTCCACGAGGCGGTTATTGTAGCAGCGCTTCGACACCACACAGCTCGGGTGGGTCTTATGGTGCTTCGGTGGCCGCTAATGGTTATGGACCCACCACCAATATGGTATCGTCACCGTGGCATCAGGCGCTAGTGCAACACCATCACACACATCCGCACCCATATCATCACCACACCCACCAGCCGTGGCACAATCCAGGCGCCTCCATTGCAACGGCGGCAGTGTAG
- Protein Sequence
- MFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVIDHSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVVIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHMPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLHKLVPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPSGSTGFNSYTGQLAVSVQDTAGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASVAANGYGPTTNMVSSPWHQALVQHHHTHPHPYHHHTHQPWHNPGASIATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- -
- 80% Identity
- -