Ccap008540.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- grh
- Assembly
- GCA_000347755.4
- Location
- NW:444609-665505[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 7e+03 -4.5 1.5 90 106 22 38 8 51 0.47 2 3 0.055 3.3e+02 -0.2 0.2 79 116 479 512 461 543 0.57 3 3 7.1e-63 4.3e-59 198.9 0.2 26 221 840 1030 826 1032 0.94
Sequence Information
- Coding Sequence
- ATGTCCGCATCGCCTGCCACGACTAGTGTCATCACTTCAAACGAACTTGCcatacaacaacaccaacaacagcaacagcagcttcaacatcagcagcaacagcaacagcaacaacaccaacaactacAAACACACAATTCTCCCACACGTGTCTCACTACCACCCGGTGTCACTGTGACCAACGTTGTAACGACAAACTCCTCCGCTGCCGCATCTGCCGCCGGCGCCAACGGTTTATCACTCATGCATCGTTCACCAGATAGTCCACAGCCCGAGTTGGCCACCATGACTAATGTTAACGTACTCGATCTTCATACAGACTCCTCGAAGCTCTACGACAAGGATGCCGTCTTCATCTATGAAAGCCCGAAGGTGGTGTTGCCAGCCGGTGTGGGCACCGGTGCGACAGTGACCAATGATGAGCATGTGATTGATGCCCGTATGGTTGCGCAATTGAACGAACAACAGGCTGCTGTTGCAGcggctgccgctgctgctgcggcgACCGATAATCAGCCGTTGGCTAAGATTGAATTCGATGAAAATCAGATAATACGCGTCGTTGGTCCGAATGgcgagcaacaacaaattatttcacGTGAAATAATCAATGGAGAACATCACATACTGTCACGTAACGAGGCGGGCGAACACATACTCACACGCATTGTCAGCGATCCGACCAAATTGATGCCAAGCGATAATGCCGTGGCCGCTGCAATGTTCAATCAGGCACAAAAGATGGCTAATGATCATGGCGTATATCAGACGTCGCCGTTGGATGCGTCAATGTTGCAGCATTACGAGCAGGACAATGTTGTTAAGGCGGAGGTGGATATATATGATGATCCGAAGAAGCCGCCGGGTAGTGGCGGTGGTGGTCAACAAATACTCTATACCACGGCAGGTCCGGATGCCGGCAAACAATTGTCGCACATGCCCGTCACAGCGAAACTGGAGTCGGATATGTATCCGACAGACAAACACATTGATTTGATCTATAATGATGGCAATAAAACCGTTATATATACAACAACGACCGATCAAAAGGGTCTAGAGATTTACTCGGGCAGTGATTTGAGCGGCCTGGTTGCCGATGGCCAAGTGGTGGTGCAAGGTGGTCTGCAATATGCTGGCGCTGGCACAGCTGGAGGACAGCCCGTCTACATTGTATCGGATGGAAGCTTGCCGCCGGGCGTTGAGGGTCATTTACAAAGCACACCTACGGCCACTAACAGCAAGCTGAACGGCCAAACCACACCTCTGGACGTATCTGGCCTATCGCAAAATGAATTCCAAGGCCTATTGCTTGGTGCACACCCATCGGCGGCTGGCGGTGCCGGCAACGCAGTcacaacaccaacaaccatCACGCAACATTCGGCCATTGTGGCTGCAGCCACAGCAGCTGCAGCGGCAGCTGGTAGTGCCACCACAGCTGTGGTCGTGACCGCCGAACAGCAACGTCaggcacaacaacagcagcagcagcaacagcaacaacaacaacagcaggcaCAACAAACTATCAGCATCAAGCGCGAACCGGAAGATCTGCGTAAGGAGCCGAAAAGTGGCGGCGTTAGCAGCACAATTGTCGATGGGACGAACAGCATCACTAACggtcatcatcagcagcagcagcatggCGGCACGAAGGTTTTAGTTGTCCAATCACCATCGCCAAcagcacaaacaacaacaatacatattAAAGAATCGCCTAATAGTCCTGGAAGTCCAACAACTGAGACAATGTACGCTGCCAGTGGCGGCACACAAATTTACTTGCAGggcGCTCATCAGTCCAATGCACCTGGCAGCGCTGTCGGCGGTCCGAATAATGTAAACGTTCAAAATGCCCAGACACCCAGCCCAGGTCCGTATATCACACCCGATGGATATGGCATGTACACGACTACACGCCTCACTTCAGGCGGTCCCACATCGACATTCATAACCGAACCCTATTACCGGGAATTTTATACCACAGCCACTACAGCGGACACACAAACCGGTTATGGACAGGCGCCACGTAATATTGTGTATGGTGGCGCTGAGAGCGAACCGCCACATCCGGGCACAACATATGAGGGTCGTTTCACCACAGCTGCCGCTCCTGTGAACAGCATGCCCACACATAGTACAGCTACGACGGGCACAATAAAAAATGGCGGCACACCGGTGTATGCAAAGACCATAACGGCTGCTGGGTTGACAGTGGATTTGCCTAGTCCAGATTCGGGTATTGGCGCTGATGCGATTACACCAAGGgatcaaaataatatacatcaGTCTTTCGACTATACAGAGCTTTCGGGCACACTATTGGACAGCAATGGCGGCATACCCGTCTCGGTGAATAGCATACAACGTGGCGCTGTTAGCGTTCACGGTCAAAATAGTCCGACTACTTCGTTGGGTGGTTCGACGCCGAATGGCGCAACACGTTCGAGGCCGTGGCATGATTTTGGGCGACAAAATGATGCggataaaatacaaataccaaaaatCTTCTGCAATGTCGGCTTCCGCTATCACCTAGAGAGTCCAATCAGTTCATCACAACGCCGTGAAGACGATCGcatcacatacataaataaaggaCAATTCTATGGCATTACACTGGAATATGTGCCCGATCCGGATAAGCCTATCAAAAATACAACCGTTAAGaGCGTTATTATGCTGATATTTCGTGAAGAGAAAAGTCCCGATGATGAAATCAAAGCCTGGCAGTTTTGGCATAGTCGACAACACAGCGTTAAACAACGCATTTTAGATGCAGATACGAAAAATTCCGTCGGCCTAGTTGGTTGCATCGAGGAGGTCTCCCACAATGCCATCGCCGTCTATTGGAATCCACTAGAGAGCTCAGCCAAGaTCAATATTGCTGTCCAATGCCTGAGTACGGACTTCAGCAGTCAAAAAGGAGTTAAGgGCCTACCACTACACATTCAAATCGACACATTCGAGGATCCACGCGATGCGCAAGTCTTCCATCGAGGCTACTGCCAAATTAAGGTTTTCTGCGATAAGGGTGCTGAGCGTAAAACACGTGATGAGGAGCGTCGCGCTGCTAAACGTAAAATGACCGCCACAGGACGTAAGAAGCTCGATGAGCTATATCATCCGGTCACTGATCGTTCGGAGTTTTATACAATGCAAGATTTACAAAAGCCACCGGTATTATTCTCACCCGCCGATGATATGGAAAAGGTGAGTTGCATAAGCTTCTACGGCCACGAGACTGATTCACTGACCGGCGCACCAGATCTCAAAGGCACATCACCATTCTTATTGCATGGCCAAAAAGTGGCGGCGCCAACACTCAAATTCCACAATCATTTTCCGCCCGACGTGCAGACCGACAAAAAGGATCACCTGCTGGATCAAGGTTTAGTACCCAGTGCCATGGGCGATTATGTGCCACCATTGAAACGTGGACGCATGACACCGCCAACCAGCGAACGCGTTATGCTGTTCGTGCGACAGGAGAACGAGGACATATACACGCCATTACACGTGGTGCCGCCCACAACTATTGGCCTCTTGAATGCGAttgaaagtaaatacaaaatctCAACAGCgagtataaataatatttatcgtACAAATAAGAAAGGGATTACTGCGAAAATTGACGATGACATGATATCGTATTATTGCAATGAAGATATCTTTCTGCTGGAAGTGCAACAGATCGAAGATGATTTATATGATATAACATTGACGGAGTTACCCAATCATTGA
- Protein Sequence
- MSASPATTSVITSNELAIQQHQQQQQQLQHQQQQQQQQHQQLQTHNSPTRVSLPPGVTVTNVVTTNSSAAASAAGANGLSLMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKDAVFIYESPKVVLPAGVGTGATVTNDEHVIDARMVAQLNEQQAAVAAAAAAAAATDNQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPTKLMPSDNAVAAAMFNQAQKMANDHGVYQTSPLDASMLQHYEQDNVVKAEVDIYDDPKKPPGSGGGGQQILYTTAGPDAGKQLSHMPVTAKLESDMYPTDKHIDLIYNDGNKTVIYTTTTDQKGLEIYSGSDLSGLVADGQVVVQGGLQYAGAGTAGGQPVYIVSDGSLPPGVEGHLQSTPTATNSKLNGQTTPLDVSGLSQNEFQGLLLGAHPSAAGGAGNAVTTPTTITQHSAIVAAATAAAAAAGSATTAVVVTAEQQRQAQQQQQQQQQQQQQQAQQTISIKREPEDLRKEPKSGGVSSTIVDGTNSITNGHHQQQQHGGTKVLVVQSPSPTAQTTTIHIKESPNSPGSPTTETMYAASGGTQIYLQGAHQSNAPGSAVGGPNNVNVQNAQTPSPGPYITPDGYGMYTTTRLTSGGPTSTFITEPYYREFYTTATTADTQTGYGQAPRNIVYGGAESEPPHPGTTYEGRFTTAAAPVNSMPTHSTATTGTIKNGGTPVYAKTITAAGLTVDLPSPDSGIGADAITPRDQNNIHQSFDYTELSGTLLDSNGGIPVSVNSIQRGAVSVHGQNSPTTSLGGSTPNGATRSRPWHDFGRQNDADKIQIPKIFCNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVPDPDKPIKNTTVKSVIMLIFREEKSPDDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDAQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLQKPPVLFSPADDMEKVSCISFYGHETDSLTGAPDLKGTSPFLLHGQKVAAPTLKFHNHFPPDVQTDKKDHLLDQGLVPSAMGDYVPPLKRGRMTPPTSERVMLFVRQENEDIYTPLHVVPPTTIGLLNAIESKYKISTASINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDITLTELPNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00190454;
- 90% Identity
- iTF_00190454;
- 80% Identity
- -