Basic Information

Insect: Ceratina calcarata
Gene Symbol: stc
Assembly: GCA_026724355.1
Location: JAKKRE010000009.1:10613638-10624673[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 2.7e+04 -4.3 1.6 15 19 504 508 503 508 0.81

2 16 0.16 2.1e+03 -0.6 0.3 4 10 537 543 536 543 0.94

3 16 0.0032 43 4.8 18.3 4 18 554 568 552 569 0.94

4 16 0.68 9.2e+03 -2.6 0.8 1 10 587 599 587 599 0.73

5 16 2.6e-07 0.0036 17.9 14.9 1 18 605 622 605 623 0.97

6 16 2 2.7e+04 -5.2 1.6 9 13 629 633 628 634 0.69

7 16 0.82 1.1e+04 -2.9 0.8 6 10 651 655 650 655 0.89

8 16 6.3e-10 8.5e-06 26.2 13.9 1 19 661 679 661 679 0.99

9 16 1 1.4e+04 -3.2 0.7 5 10 708 713 708 713 0.94

10 16 3.8e-06 0.051 14.2 12.8 4 18 726 740 719 741 0.85

11 16 2 2.7e+04 -4.6 1.6 5 10 770 775 770 775 0.90

12 16 0.00059 8 7.2 8.1 1 11 781 791 781 792 0.97

13 16 1.9e-10 2.5e-06 27.9 13.8 1 19 808 826 808 826 0.98

14 16 2 2.7e+04 -6.7 11.0 10 19 873 883 862 883 0.76

15 16 4.1e-07 0.0055 17.3 13.5 1 16 919 934 919 945 0.85

16 16 6.1e-05 0.82 10.3 14.0 1 19 951 970 951 970 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	2.7e+04	-4.3	1.6	15	19	504	508	503	508	0.81
2	16	0.16	2.1e+03	-0.6	0.3	4	10	537	543	536	543	0.94
3	16	0.0032	43	4.8	18.3	4	18	554	568	552	569	0.94
4	16	0.68	9.2e+03	-2.6	0.8	1	10	587	599	587	599	0.73
5	16	2.6e-07	0.0036	17.9	14.9	1	18	605	622	605	623	0.97
6	16	2	2.7e+04	-5.2	1.6	9	13	629	633	628	634	0.69
7	16	0.82	1.1e+04	-2.9	0.8	6	10	651	655	650	655	0.89
8	16	6.3e-10	8.5e-06	26.2	13.9	1	19	661	679	661	679	0.99
9	16	1	1.4e+04	-3.2	0.7	5	10	708	713	708	713	0.94
10	16	3.8e-06	0.051	14.2	12.8	4	18	726	740	719	741	0.85
11	16	2	2.7e+04	-4.6	1.6	5	10	770	775	770	775	0.90
12	16	0.00059	8	7.2	8.1	1	11	781	791	781	792	0.97
13	16	1.9e-10	2.5e-06	27.9	13.8	1	19	808	826	808	826	0.98
14	16	2	2.7e+04	-6.7	11.0	10	19	873	883	862	883	0.76
15	16	4.1e-07	0.0055	17.3	13.5	1	16	919	934	919	945	0.85
16	16	6.1e-05	0.82	10.3	14.0	1	19	951	970	951	970	0.97

Sequence Information

Coding Sequence: ATGGCTACTTGGGACGGTTCTTATTCAGGTCCAGATGACAAAAATTATTACGTGTACTCCGATCAAAATGTAGCCGGGCCCGCGACAGCCAGCTGGACGTTCTTCTCTAATAACGCGAACAACGATTATCTGCAGCCGAATGGCGAGTTTTATGTACAAAGAGAACCTGGCCAGCAGCGAAATAATCTAACCGCATTCTATCAGTCAAACGCCAATGTGATGCCAGGTTTATTGCCTGCTGCTAATGATTATTGCCAGCCTGTAAATCCGACGGATAACGATCGAGTGTTAATTAATCGCGAGTATTTTCCAAATGACGTTAAACAATGCTACATGCCTTGGAGTCAAGATTTAGATACGAATAAGCAGAATTTTGGAATCAAGGAGCCTGTGCACAATGAAACTAATCAATCAAAACTGAATGTGATGGTTGAAGATTTTAAGCCAAGTAACGAAGGATCAGATGACAAGAGATTGCAAGGCACATCATCCATTAATAGTACTTATTTCAAAGGTAATAGCAGATATCCATCGAATACAAGTAGGCAGGAGAAGAAGTACAATAATAAAAAGAATTTCAATTACAAACCCAGAGAAGAGGGGCAGAATCAGTTCTACAAAAGAAATATATATGGGCACTCATATCACCAAGACAGAGGTAACAAGTTTCAGGGTAATAAGTACTTTGCCAATAAATATCCTTCTGATAGATCGAGTATTAGAAATGGTAGTACGGATGCGCTGAGTATATATACTGTAAATGAAAGCATTCCTTGCAATAGCAAAAAAGAGTTTAGCACAAATGTAAATGAAAGAGAATCTTTAAATGTAAAGGCATCTAGAAGTAGGGAATTATTGAGTGCAGGCAAAGAAACTAATGTCGCTGATGGTAAAAATGTACCAGATAATACGGTCGCAGAATCGAGTTACTACTACTGTAAGCAACCGTACGGCAATCATAGAAATATAAAAAGATATCAAGACAATGGCCGGTACAATAGAGAAGAAAATTGTTATAAAGACAAACGACGTAATTATCAGGGATACGGTAGAGAAAATTACAACAGAGATGATAAATTCAAAGCATGCGGTAGCAATGAATTTAAGGAATGTTCGAACGAAGAAACTGGATCAGACACGAAGAGAACTAATGAGAAAAGGCATAATCATCAAGGATACTACAATGAATTTAGAGAACACAAAAAGGATGGCAGAATAGACGTTGGTAAAGAGAAAGGGAATGAACAAGTTAGAAGTAAAAAAGAAATGGGAGAAAAGAATTATGTTCAAAAACGGAGAGAGAATAAAAAGTCGCCAATCGATGATGATTCAAGTCAGAGGGAAAGATTAACAGATCAACTAAACAAGGGCCATTTAGAATGCCTAGTATGTTGCGAATATATTAAGCAGAGCGATTACGTTTGGTCATGTTCCAACTGTTACCACGTTCTACACTTAAAGTGTACTAAAAAGTGGGCGAAATCGTCGCAAGCAGAGAATGGTTGGAGGTGTCCAGCGTGTCAGAACGTGAACTTAATAATCCCGGAGGATTACTTTTGCTTCTGCGGTAAAACGAAAGCACCCGAATGGAATCGTAGAAGCGCCGCGCATTCGTGTGGCGAAATCTGTGGTAGGATGTTATCGAAGAATAGCTGCCCCCACAAGTGCTGTCTTCTGTGCCATCCAGGATCCTGTCCGCAATGCGCGGCGATGGTAACGAGACATTGTGGCTGTGGCAGAACCTCACAAACGGTCCAGTGCAGCAATCACAAACTGTTGCTGTGCGATGCCGTGTGCGAAAAGGATTTAAACTGCGGTAAACATAAATGCGAGAAGAAATGCCACCATGGAGAATGCGCAATATGTGATAAAACGATAACGCAAGAATGCCATTGCGGTAAGAATAAGAGAGAAGTACCCTGCGAAAGTAACGTTTCATCCGTTTACTCTTGTGAGAACGTTTGCGGCAAATTATTAGAATGTGGGAATCATGCTTGCGCGAAATTATGCCATCCTGGTGATTGCGAGCCTTGCCCTTTGGGCGTTGACAAGATTGCAACCTGCTGTTGTGGACAAACGCCGTTGCCGGATAAGAGAGAATCTTGCTTGGACCCAGTCCCCACTTGCGACAAGATATGCTCGAAGAATTTAAAATGCGGCCAGCCTAATAATCCTCACAAGTGTAAAGCAAAGTGTCATCAAGGCGATTGTCCTGCATGCGATTTAACTACCGATGTTAGATGCCGCTGTGGGAACATGGATAGGGAAATAGCTTGTAAAGACCTGACGACAAAGGCGGACGATGCGCGATGCGAGAAGAGGTGTATGAAAAAGAGGTCGTGCGGCAAGCATAGATGCAATCAGCTGTGCTGCATAGACATAGAGCACGTTTGTCCGTTGATCTGTTCTAAGACTCTGAGTTGTGGTAGACACAAGTGCGAGCAGAGTTGTCACAAAGGAAGGTGCCAACCTTGCTGGCGCAGCAGTTTCGAGGAATTGTATTGCGAATGCGGAGCTTCTGTGACGTATCCTCCTGTTCCCTGCGGCACGAGAAGACCTGCCTGCGACAGACTTTGTTCCCGTCAACACAGCTGCGGACACGAGGTGTTGCACAATTGTCATAGCGAGCCACAGTGCCCCCCTTGCACTGTTCTCACTCAACGATGGTGTCATGGCAAACACGAGCTACGTAAAGCGGTGCCTTGTTACATTAGCGAGATTTCCTGCGGTTTACCGTGTAACAAGCCATTATCATGTGGTAGACATAAATGTATCACTATATGTCATCCTGGTCCTTGCGAGAAACCGGGACAGCAGTGTACTCAACCGTGCACTGCGCCCAGAGAGATTTGCGGACATATCTGTGGCGTGCCGTGCCACGAAGGCAAATGTCCCGATATTCCGTGCAAAGAGATAGTTAAGgtaacgtgtcagtgtggacacagaaccatgtcccgagtatgtgccgagaatgctcaagaatatcagagaatagcgagcagtatattggccagtaaaatggccgacgtgcagctaggacattccataaacttggaggaagtgtttggccaaggcgcgaagaagcagaatcaactgaagacattggaatgcaacgacgagtgcaagataatcgaacgaaacaggagattggcgttgggtctgcagatcgcgaatccggacctcagcggtaagctgatgcccaggtacagcgaTTTCATGAAACAGTGGGCCAAGAAGGATCCGCACTTCTGTCAAGTGGTTCACGAGAAACTGACGGAACTGGTGAAGTTGGCGAAAACGTCTAAGCAGAAATCGCGTAGCTACTCGTTCGACAGTATGAACAAAGACAGGCGTCACTTCATTCACGAGTCTTGCGAGCATTTCGGATGCGAGAGTCAGGCGTACGACCAGGAACCGAAAAGGAACGTTGTTGCAACTGCCGTAAAGGATAAGTGTTGGTTACCTAGTTACAGTTTATTAGAGATTGTACAACGAGAGAACGGCCAAAGGAAAGTCCCAGGCCCGATGAAAAATTTCAAAAGGACAATATTATCACTGCCTGCGAAAAAACTCGAGAAGCCAGAAACACCGCCGTCTAGTTCAAAGGCGTCGGAGCCAGAAATCGATTATTTTGATTATCAAGGGTAA
Protein Sequence: MATWDGSYSGPDDKNYYVYSDQNVAGPATASWTFFSNNANNDYLQPNGEFYVQREPGQQRNNLTAFYQSNANVMPGLLPAANDYCQPVNPTDNDRVLINREYFPNDVKQCYMPWSQDLDTNKQNFGIKEPVHNETNQSKLNVMVEDFKPSNEGSDDKRLQGTSSINSTYFKGNSRYPSNTSRQEKKYNNKKNFNYKPREEGQNQFYKRNIYGHSYHQDRGNKFQGNKYFANKYPSDRSSIRNGSTDALSIYTVNESIPCNSKKEFSTNVNERESLNVKASRSRELLSAGKETNVADGKNVPDNTVAESSYYYCKQPYGNHRNIKRYQDNGRYNREENCYKDKRRNYQGYGRENYNRDDKFKACGSNEFKECSNEETGSDTKRTNEKRHNHQGYYNEFREHKKDGRIDVGKEKGNEQVRSKKEMGEKNYVQKRRENKKSPIDDDSSQRERLTDQLNKGHLECLVCCEYIKQSDYVWSCSNCYHVLHLKCTKKWAKSSQAENGWRCPACQNVNLIIPEDYFCFCGKTKAPEWNRRSAAHSCGEICGRMLSKNSCPHKCCLLCHPGSCPQCAAMVTRHCGCGRTSQTVQCSNHKLLLCDAVCEKDLNCGKHKCEKKCHHGECAICDKTITQECHCGKNKREVPCESNVSSVYSCENVCGKLLECGNHACAKLCHPGDCEPCPLGVDKIATCCCGQTPLPDKRESCLDPVPTCDKICSKNLKCGQPNNPHKCKAKCHQGDCPACDLTTDVRCRCGNMDREIACKDLTTKADDARCEKRCMKKRSCGKHRCNQLCCIDIEHVCPLICSKTLSCGRHKCEQSCHKGRCQPCWRSSFEELYCECGASVTYPPVPCGTRRPACDRLCSRQHSCGHEVLHNCHSEPQCPPCTVLTQRWCHGKHELRKAVPCYISEISCGLPCNKPLSCGRHKCITICHPGPCEKPGQQCTQPCTAPREICGHICGVPCHEGKCPDIPCKEIVKVTCQCGHRTMSRVCAENAQEYQRIASSILASKMADVQLGHSINLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQVVHEKLTELVKLAKTSKQKSRSYSFDSMNKDRRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMKNFKRTILSLPAKKLEKPETPPSSSKASEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -