Basic Information

Insect: Ceratina calcarata
Gene Symbol: L
Assembly: GCA_026724355.1
Location: JAKKRE010000008.1:10597977-10607710[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.1e-06 0.00099 20.0 1.5 1 23 68 90 68 90 0.98

2 21 0.46 56 5.0 3.9 1 23 96 118 96 118 0.97

3 21 1e-06 0.00012 22.9 4.3 1 23 124 146 124 146 0.99

4 21 0.00022 0.026 15.5 0.2 1 23 152 174 152 174 0.99

5 21 0.00025 0.03 15.3 1.0 1 23 315 338 315 338 0.97

6 21 0.77 93 4.3 0.0 3 23 350 371 349 371 0.89

7 21 0.2 24 6.2 0.1 3 23 434 454 433 454 0.97

8 21 0.013 1.6 9.9 0.3 1 23 466 488 466 488 0.96

9 21 0.064 7.9 7.7 0.3 3 23 499 520 497 520 0.91

10 21 3.6 4.4e+02 2.2 0.2 1 23 525 548 525 548 0.91

11 21 0.36 44 5.4 2.0 2 23 623 644 623 644 0.96

12 21 0.009 1.1 10.4 0.1 1 23 649 672 649 673 0.94

13 21 0.62 75 4.6 0.1 2 23 753 776 752 776 0.84

14 21 0.00023 0.029 15.4 0.5 2 23 793 815 792 815 0.96

15 21 1.1 1.3e+02 3.9 0.6 1 12 824 835 824 847 0.76

16 21 5.4 6.6e+02 1.7 0.2 5 23 858 876 854 876 0.88

17 21 0.00045 0.055 14.5 0.2 2 23 1038 1059 1037 1059 0.96

18 21 0.081 9.9 7.4 0.2 1 23 1070 1093 1070 1093 0.96

19 21 1.2 1.5e+02 3.7 0.4 2 23 1106 1127 1105 1127 0.94

20 21 0.46 56 5.0 0.1 2 23 1136 1158 1135 1158 0.93

21 21 0.018 2.2 9.4 3.5 1 23 1165 1188 1165 1188 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.1e-06	0.00099	20.0	1.5	1	23	68	90	68	90	0.98
2	21	0.46	56	5.0	3.9	1	23	96	118	96	118	0.97
3	21	1e-06	0.00012	22.9	4.3	1	23	124	146	124	146	0.99
4	21	0.00022	0.026	15.5	0.2	1	23	152	174	152	174	0.99
5	21	0.00025	0.03	15.3	1.0	1	23	315	338	315	338	0.97
6	21	0.77	93	4.3	0.0	3	23	350	371	349	371	0.89
7	21	0.2	24	6.2	0.1	3	23	434	454	433	454	0.97
8	21	0.013	1.6	9.9	0.3	1	23	466	488	466	488	0.96
9	21	0.064	7.9	7.7	0.3	3	23	499	520	497	520	0.91
10	21	3.6	4.4e+02	2.2	0.2	1	23	525	548	525	548	0.91
11	21	0.36	44	5.4	2.0	2	23	623	644	623	644	0.96
12	21	0.009	1.1	10.4	0.1	1	23	649	672	649	673	0.94
13	21	0.62	75	4.6	0.1	2	23	753	776	752	776	0.84
14	21	0.00023	0.029	15.4	0.5	2	23	793	815	792	815	0.96
15	21	1.1	1.3e+02	3.9	0.6	1	12	824	835	824	847	0.76
16	21	5.4	6.6e+02	1.7	0.2	5	23	858	876	854	876	0.88
17	21	0.00045	0.055	14.5	0.2	2	23	1038	1059	1037	1059	0.96
18	21	0.081	9.9	7.4	0.2	1	23	1070	1093	1070	1093	0.96
19	21	1.2	1.5e+02	3.7	0.4	2	23	1106	1127	1105	1127	0.94
20	21	0.46	56	5.0	0.1	2	23	1136	1158	1135	1158	0.93
21	21	0.018	2.2	9.4	3.5	1	23	1165	1188	1165	1188	0.97

Sequence Information

Coding Sequence: ATGTTGTTCAAGGGAAACAGAGGAACCACAAAAATCCAAAGAGGCGTTGGGTACCGGAAGTTCGTCGTGGCAGAGCGAGGATGGTGGCGGTGTCTCGCGTCGCGGGGGGAGACCCCGTCGTCTTGCGCGACGCCGACGTCGGCCAGCTTCCCGTCGGAGCCCGAGGTCGACCCCGACACCGGGAACAACGCGATCGCTCCCTATCCATGCCAATTCTGCGATCGCACCTTCCCGAGGCTCAGCTACCTCAAGAAGCACGAACAGAGTCACGGTGACCAAATGCCGTACAGGTGCAGCTGGTGTGCTAGATTGTTTAAACATAAGCGTAGCAGAGATCGCCACGTGAAATTGCACACGGGAGACCGAAGATATCGATGCACGCACTGCGAGGCTGCTTTCTCCAGGAGCGATCACCTGAAAATCCACATGAAGACGCATGACACGCAGAAGCCGTACCAGTGCACGGCGTGCTCGAGAGGCTACAACACGGCAGCTGCCCTGACGTCGCACATGCAGTCGCACAAGAAGCAACACCAGTCGCAAGGAGCGAAGCTGCAGGACATCGATTACGGTAGAAGAAGCGTGTCCTCCCACAGTACCAGTTCGCCACCCGTACCGACCTCTCCCTCGCCCTCGTCGTTGAACTTGACGACGTCACTGAACTCGAAGACGTTGAAGAGCTCCCAGGGAAGCTCGTCGACCACTCCGATCTTGACATCCCCGCTGAAGCTGGCCTGCATGTACTGCACCAGGGACTCGTTCAGCTGCATGCAACAATTGCAAATGCACGTGCACACGATGCATCAGGCTATATTGAGCGGGGAGGCGGTCGCGATGTCCGACTCGCAGAACGGGAACGCGGAACGAGAGAAGAGGATGGACGAGGCATCTTCAGCGGCGAGCGACTACCAGAAGAAGCATCGAGAAGACTCAGAGAACGCGTTCACGTGCAATCAATGCACCATGAAGTTCTCCTCGTTGAACTTGTTGAGGGACCACCTGATGTCCATTCACAGAACTGACGGGTTCGGTGCGGGGTTGATGCTCTGTCCCCTCTGCGGCATTCCCTGCGCCTCGGCGGCGGCTTACGCTGAGCACTACGTTCTCCAGCACTGCGAGAATCGAAGACTGGCTCCGCTGGAACCTCGCGAGTACGCTGCCTATAAACCGAACGGGACTTACGACTCGAAGAGGAATCAGAAGAGCCGCGAGCAGTCGAATTGCGAGCCGGCAGATTTGACCAGCAAGCGTTCTCTGGACAACAATTCTGATAACAATTACACCGCTGGAACGTTGCTGTGCGGTCAGTGCGGAGCGGCTCTGAAGGACTTCGAATCGTTCAGGGAACACCTGGCCCGGCACCTTCAAGCCGATCACCGAAGTGAAGTGGTCAGACATCCGTGTCCGAAATGCGACGCTAGCTTTCAGGAGAGGGAGGGAATGCTGGCGCATCTGACGAAACATTATCTCAGCCAGATAAGCAAAGAATACGGTTGCGGTGCTTGCAAGAAACTGTACCCCCATCCGGACCTTCTCCAGAGGCATCTGCTCGACAGCCACGCGCACCACCTCTATCGATGCGCGTTGTGCCGGGACACGTTCGACTCGAGGGTCGCGATACAAGTTCATTTCGCGGTGAAGCACAGCCAGGAGTGCAGGATCTATCGCTGCAACGCGTGTACGACGTCGAACAATGAGAACTCGCCGGGGAACGCGCCTGGGGAGGGTAAAAGCTTCTTCAGGAGCGAGTCGGAGATGGCGAACCACGTGAGAAACGTTCACGCGCCGCCGCCGACGGCGGTCAACAGTCCCGCGGCCAGGAGTCCTGCTTCTACTCCCGGTCTCACCGGGAACGCAACCTCCGCGAGATGCGTATTCTGCGGCGTGTGCTGCAACTCCGAGCTGGAGTTGCAACTTCACTTGGCCAGTCACTCGGCCAACATGTACAGATGCCCGGTTTGCAGAGAGGGATTCGCAGTCGAATTTTTATTGGACAGACACATCGCCCAGGCGCATCATCAGACCGAGGATCAGCCCAGAACTAATTCCAGGGAAAACGGCAGGATCGGCAGGCCACCAAGGTTGCAGGACGAGACGAAATCGCAGAAGAGAGGACGTTCTCCAGCTTCCAGTAACAACAACTCGTTGAATCAACGGGACAATAATAACAAACGCGCGAATTACGCGAATTACGCGAACTATACGAGCTACGCAAACTACGCGAACCCGTCCTCATCCCCTCAGCAGCAGCAGCAGCAATGCGATCTCTGCGAGAGAGGCGAATTTTCGAACGAAGCGGAGCTCCAAGCGCACAAGAAAGTCGCCCATCCTGCTACCAACAAGCTACAAAGCAAATCCGTTGCGAATTTAAGCATGACTTGCGCCTACTGTGGAGAAGCTTGTCGCTCGAGGGCTGAGCTCGAGTCGCACACGAGAATCCAACACGCCTCGAACGAGCCCGGCGGTCGTCACAAGTGCAACATCTGCGACGAGGTCTGCCCCTCTGGCGCAATCCTTGCTGAACATAAATTACAGAAACATTGCAAGATCCAATTGAGCGATACCTGCATCGTTTGCCGGGGGAGTCTGACGACGGAGTCCCAGTTCTTGGAACACGTGCAACGGCACAGCTTGGAGAACGTGGACCCTCAGCAGAGATTGGACAACGGATCACTTCCCGCTGCGCATCTACCCGCCGCGTGCGTCGTTTGCCGGCAGACGTTGATCAGCGATCTGGAGTGTCGCCTTCACGCCAGGCACCACCTGAGAGTCTCTACGGGGTCGAACAGCGCTGGGTCTGGTGCGAGTCCGAGTCCCAGCCCAAATCGGAAGAGTCAGAGCCCGAGTTGTTGTCTCTGTTTGAGGGATTGTTCGACAGACGAGTTCGTGAATCTTCCTCCGAGTCACGTGAGCGGCGGAAGTCAGACTCTGAGGGTGTGCAAGCCCTGTTACATTCGCCACTCTCAGGGTTTACCTATATTAAATTCACCGTACGAGCCTGTCAGATCGAAGTGCGAGCGTCCTTGGTTGAAGGATGGACAATGGGACAGTTCCAAGGATAGATGGGAGACCGAAGGAAGATTCAAGGAAGGCAGGAGCGAGGATGGGAAGAGGTGCCAGGACTGCGGGTTGAAGTTCGAGGATCCCGAGGAGATGGAGAAGCACAGGCTGGAACACGATAAGCCGGTACCTTCGAACGCGCGTACTTACACGTGCATACAGTGTCAGATATCGTTCCCAACGGAGGCAAAGATACAGCAGCACGTGAGGAAAGAACACCTGGAGGGCTCGGGAAACGCTGTCATCGAGGCATTGCGATGTCATCTGTGCTTGTTTGAAGCTAGCAGTCCATTACAGCTACAGAGTCATTTGATAGAACACACTTTCGCTGGATGCGCCGCGCTCAGTTGTTACATTTGCCAGTCTCTCTTCACCGCGCCTATCGGCCTTCAGAATCACATGCTTCAAGAACACGGTTTAGGCGCTCGTCCGTACGACTGCTCCAAGTGCACTCTCAAGTTCTTCTTCAGAGCCGAGTTGGATCACCATATGCTAACGTTCCATAGACCATCTTCGCCTGGTACCACTCCGGAAAATGGCATGGATCAGAAATCCAATGATAGGAAAGAGGGGAACGGTGAGAGCGAAGTTAAGGTGAAGGAGGAAGTGATGCCAGAGACCGTGGAAGAAGACGAGGAAGAGATCAACGTAGACGAGCAAGTGGAACAGGGTAACGAGTCGGACGGACGGACACAAATCGGGAATAACTTGAAGACGGAAACTGAAGGTGAAACCGTTCCCCAGAAAGTAGAGTCGTGA
Protein Sequence: MLFKGNRGTTKIQRGVGYRKFVVAERGWWRCLASRGETPSSCATPTSASFPSEPEVDPDTGNNAIAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDTQKPYQCTACSRGYNTAAALTSHMQSHKKQHQSQGAKLQDIDYGRRSVSSHSTSSPPVPTSPSPSSLNLTTSLNSKTLKSSQGSSSTTPILTSPLKLACMYCTRDSFSCMQQLQMHVHTMHQAILSGEAVAMSDSQNGNAEREKRMDEASSAASDYQKKHREDSENAFTCNQCTMKFSSLNLLRDHLMSIHRTDGFGAGLMLCPLCGIPCASAAAYAEHYVLQHCENRRLAPLEPREYAAYKPNGTYDSKRNQKSREQSNCEPADLTSKRSLDNNSDNNYTAGTLLCGQCGAALKDFESFREHLARHLQADHRSEVVRHPCPKCDASFQEREGMLAHLTKHYLSQISKEYGCGACKKLYPHPDLLQRHLLDSHAHHLYRCALCRDTFDSRVAIQVHFAVKHSQECRIYRCNACTTSNNENSPGNAPGEGKSFFRSESEMANHVRNVHAPPPTAVNSPAARSPASTPGLTGNATSARCVFCGVCCNSELELQLHLASHSANMYRCPVCREGFAVEFLLDRHIAQAHHQTEDQPRTNSRENGRIGRPPRLQDETKSQKRGRSPASSNNNSLNQRDNNNKRANYANYANYTSYANYANPSSSPQQQQQQCDLCERGEFSNEAELQAHKKVAHPATNKLQSKSVANLSMTCAYCGEACRSRAELESHTRIQHASNEPGGRHKCNICDEVCPSGAILAEHKLQKHCKIQLSDTCIVCRGSLTTESQFLEHVQRHSLENVDPQQRLDNGSLPAAHLPAACVVCRQTLISDLECRLHARHHLRVSTGSNSAGSGASPSPSPNRKSQSPSCCLCLRDCSTDEFVNLPPSHVSGGSQTLRVCKPCYIRHSQGLPILNSPYEPVRSKCERPWLKDGQWDSSKDRWETEGRFKEGRSEDGKRCQDCGLKFEDPEEMEKHRLEHDKPVPSNARTYTCIQCQISFPTEAKIQQHVRKEHLEGSGNAVIEALRCHLCLFEASSPLQLQSHLIEHTFAGCAALSCYICQSLFTAPIGLQNHMLQEHGLGARPYDCSKCTLKFFFRAELDHHMLTFHRPSSPGTTPENGMDQKSNDRKEGNGESEVKVKEEVMPETVEEDEEEINVDEQVEQGNESDGRTQIGNNLKTETEGETVPQKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -