Basic Information

Insect: Ceratina calcarata
Gene Symbol: -
Assembly: GCA_026724355.1
Location: JAKKRE010000007.1:12807576-12811871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00012 0.015 16.3 0.1 2 23 727 748 726 748 0.97

2 16 1.3 1.5e+02 3.6 0.9 3 23 782 802 781 802 0.97

3 16 9.5e-05 0.012 16.6 1.7 3 23 811 832 810 832 0.98

4 16 0.0025 0.3 12.2 2.0 1 23 839 862 839 862 0.95

5 16 8.8e-05 0.011 16.7 0.7 1 23 868 891 868 891 0.94

6 16 7.3 8.9e+02 1.3 3.6 2 23 899 919 899 919 0.92

7 16 1.3e-07 1.6e-05 25.7 2.1 2 23 925 946 924 946 0.97

8 16 2.1e-06 0.00025 21.9 0.2 1 23 952 974 952 974 0.99

9 16 6.8e-05 0.0083 17.1 1.0 2 23 986 1008 985 1008 0.95

10 16 0.0073 0.89 10.7 2.5 1 23 1014 1037 1014 1037 0.96

11 16 0.017 2.1 9.5 6.0 2 23 1057 1079 1057 1079 0.95

12 16 0.0011 0.13 13.3 1.4 2 23 1086 1108 1085 1108 0.96

13 16 3.6e-05 0.0044 18.0 1.0 2 23 1116 1137 1115 1137 0.96

14 16 0.0011 0.14 13.3 2.3 1 23 1143 1166 1143 1166 0.96

15 16 0.3 37 5.6 3.2 2 23 1173 1194 1172 1194 0.96

16 16 0.0088 1.1 10.4 2.6 1 23 1200 1222 1200 1222 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00012	0.015	16.3	0.1	2	23	727	748	726	748	0.97
2	16	1.3	1.5e+02	3.6	0.9	3	23	782	802	781	802	0.97
3	16	9.5e-05	0.012	16.6	1.7	3	23	811	832	810	832	0.98
4	16	0.0025	0.3	12.2	2.0	1	23	839	862	839	862	0.95
5	16	8.8e-05	0.011	16.7	0.7	1	23	868	891	868	891	0.94
6	16	7.3	8.9e+02	1.3	3.6	2	23	899	919	899	919	0.92
7	16	1.3e-07	1.6e-05	25.7	2.1	2	23	925	946	924	946	0.97
8	16	2.1e-06	0.00025	21.9	0.2	1	23	952	974	952	974	0.99
9	16	6.8e-05	0.0083	17.1	1.0	2	23	986	1008	985	1008	0.95
10	16	0.0073	0.89	10.7	2.5	1	23	1014	1037	1014	1037	0.96
11	16	0.017	2.1	9.5	6.0	2	23	1057	1079	1057	1079	0.95
12	16	0.0011	0.13	13.3	1.4	2	23	1086	1108	1085	1108	0.96
13	16	3.6e-05	0.0044	18.0	1.0	2	23	1116	1137	1115	1137	0.96
14	16	0.0011	0.14	13.3	2.3	1	23	1143	1166	1143	1166	0.96
15	16	0.3	37	5.6	3.2	2	23	1173	1194	1172	1194	0.96
16	16	0.0088	1.1	10.4	2.6	1	23	1200	1222	1200	1222	0.98

Sequence Information

Coding Sequence: ATGCAGCACATTGAAGTTAATAACAAGGATCATAACTATAGTGAAGTAAAATTACATAATACTTCTAATAATATTAAAAGTGAAGGCGACAGTGATGTCAAGACGGTGTATAAATCGAACAAATCTGGATTGCCGACAAGCAAAGAACCGTTCGGTCAAATTAAGAATATAAACGAATTAAAGAAAATCACCCCTCGCGTCAAGCTGCTGTCGCACGATGCGAACAGTCTGAACGAGTTAACTAAGATCTCTTTGCACAATAAACAATCTGCACAAAAGAAGCTGTCGATAACGGAACGAACGAGGGAGGAATTAAAAAAGTATTGTAGGACTTGCGCCGGGTTGAAAGTTCCGCTGGTCGACATTTTTAGCGAGAAGGGTAATCAAATGAGATTGAGCCAACAAATTAAACATCTGGAAGAAATAAATCCGTATGACAGTTTGTCGACCCAGATGTGTATGGACTGTATATGCGATTTAAAGATGAGTTATAAATTTTTTATGCAAATAAAGAAGGCAGAAGTTAAACTGAAATCCATTCACTTTACTCTGGCCGATACTGCAACGAGGACTGTAGCAGCGAGCAAAGTACAGGCGACGGGATCTACGGAGAAACAAACCGAAACGATTGTAATTCACGACGATATAAGTCCGTCTACGAGTAAAGAGAGCGAGAAGCCGACAGCACCGTCGAGCTACGTATCTACGAGTTGTCCCACGAAGAAAGAGGAAGTTGAACAGATGTCGAAAAAAGAGAAAACTACAGTGGAACCTCAGAAATCTAATGTTAAGGATGAAATCGAGATATTCGAAGATATGGTTATTAACATAAGCAGCGATGATAATGACTCGATTGAAGAATTCGATCCAGACGATCCACCATTTCAACCTGACAGTTCCGATGCCGCGGAATCCGACGATGAACTCGAAGCACCGAACGCCAAACGGCGGCACATCCAATCAAAAGAAAACATGAAACAATTCGTTTTCTTTTCTGATAACAATTTTGTTCTAGACAAGAAAATTAATGTTTCGAATCCAGCTTCGTACAGGTATGACACTGGCCTGAAAACGTACGTAAAAGTTAACAAAATGGATGGCAACGATTGTTCTGTCGCGTCGCATGCTACCGCTAAAACCGAAGTTGAGAATGCGAAAGAATCAAAACAACCGAACATATTGAAACGTCGTTTATTATCGCAATGCAAAAAGGAATCTACGGAAGAGGTGGAAAATGATTCCGACAAGAACTACAAGGATTTTAAAGTACAAAAATTAGATGTAAATAATTCGTTAAATCTTAGTACCAGTCAAGAAGATGGTATCATGTACGTTACTGTAAAAGGCTCAAAACCGAACGAATTGTTGCTAGTGAAAGTGAAGAAGATGGACAAGCCAGTAGACAAGAAAGACGAAAAATTCATAGGGAAGAAAGGTTTTGATATTACGCCAGTGGAGAAGATTTTAAAACGATACGAGTCACTGGCCACGAAGGAGAAAGATTTATTTCCAGAGCGAACGAAAAAGGCGGAAATGAGAGAACAGATTATAGAAGAACAAATAGAAGAATATAAAAAGAAACGGGAGAAGGTTTTAGGTGGGCATAATTCTATATCAGAATCCTTAAAGCTTGAGGAATCTCAGAGTCGTTATTTCAAACGCAATGAAAGTCAAGATAAACAAAAACCGATTACTAAAGTTGACAGCGATTCGGCTCCTGCTGCCGAGAGCATGCAGATTGATAAAGACGACAGTCAGTTAGACAATTCGATTATCACAATTGAAAGCGATGTCTCAGAATCTGTAGAGTCGGTCAAGGAACTGTCGCCCAATGACAAATCCTATGCGAATACTGACGAATATCTGTCGCGTTTGTCGAAACTTAAATTGAAATGGGAAGAAGCCAAAAAGAAGAAGGAGTCTCTTCAAAAGGAGCTAGACGAATCTTACACCGAAGGGAACATAGAAAAATTGGCTAGGATCTTAGGAGAGAAGGAAAAGAATCTGCAGGATTTTCAGGAATATTTAAAACAACGTAAAATCGTGATTACGAGATTGAAGAACGAAGATATAATCTCGTTGTACGAGGACAGAAACAATGCTATATTTAAGAATAATTTACCCGATTTAATAGACGAGAGTCATCCGTTGGATTATATTCCCGAGGAACATTATTTGGAATGCGATTATTGTCCACAGACGTTTGCCTCGAAAGAAGTTCTTGAAGAACATTTAAAAAGACACGATTACAAGATCATGCACTTCTGTGAAGACTGTATGGAGGAGTTCCCGACGAATAAGGCGAAACGAAGTCACAACGTGATTTGTATAAAGAAATTGTTATGCAGATACTGCGGTATAATGTTGGACTCGAAAGGGAAGAAACGTCAGCACGAACAGAAACATTACGACAGCATGTTCGGACAGTTGTGCGACGTTTGTGGTGAGAAATTCAAACATCAGAGCACGTTGGATCAGCACGTGAAGACGCAGCACATGAGTTGGGAGAAAATATATCAATGCCCGAAGTGTCCTAAGAAGTTCGCATTCAAACAGAAGCTCAGCTTTCATTTGAAATCTGTCCACACGACGCTGAGAGCATATCTGTGCGAGGATTGCGGGGCCGATTTTAAGAACCCCGCAAGCCTCAGACACCACAGAATACGTAAACATCAACCCGTAGGTAATAAAAGAGAGTGCCAAGTCTGTCACAAACTGGTACCTTTCTACAGCCTCTCGAAACATATGCACACTCACAAGGCGTATACCATTCAGTGTCCCCATTGCGATAAGATGTTCAAAAATAGTTCTACTCTGAAACAGCACGTGAGAATCCACGAGGACCAACGTCAGTATCGGTGCGACACTTGCGGAGTTGGTTTCAATAGAAGGGACGGTTTAAGGCTGCATATGAGGGTGCACGAGAAATCTGATAGCCGAGGATTGAAAGAGTGTTCGTGTCAGGTGTGCGGCGAGAAATTTCCGAATCAGTCAACGCTGGTTATACACAGGAATCGAGTTCACAAGGACGGTAGACAGTACACGTGTCACATATGCAACAGGTCGATGATCTCCACCAGATCACTGGAATGGCATATGTCTCATATTCACAACGAATCGCTACCTAGAGAAGAGGTGGACGGGTCGTCCACGGAAAAGAGAAGGGCGTCCTGTCATCATTGTAACAAGACGTTCAAGACTGAGATGATTCTGAGGACACATATCAAGAACACGCACATGGAGAAAGATCCCATGAAGTGTTTAGACTGCGAGCTGACGTTCACTTCCGAAGTCAGATTGAGACACCACATGATGGTCACGCACAACAGACTGGAAGGAACGCTACCGTGTCCGCATTGCCCGAAGAGGTTTGTGAACCAGCTCAGACTAAAGACTCACATGATATCCCATTCTGAGGAAAGGCCGTACACCTGTGAGATTTGCGGTTTCAATTTAAAGACTAAGATACAGTTGATCAAACATCATCAGAACCGGCACAGCGACGAAAGACCGTTGCAGTGTAGATATTGTCCATGGCGGTGCAAGCAAGTTAGTGCCCTTGTATGTCACGAAAGAACACACACCAACGAGCGACCGTACTCTTGTAGCGTATGTAGGCAACGTTTTAAATATTTAGGTGATAAAAATAAGCACGAAAGACGACACGAGAGTCTAGGGGGATCGGGATTCAAGCGGATAGTTCTCGGTCGAAACATAAAATCAAAAGTGCAACAGGACTCGTCTTGTTCCGATCAGGATCAAGAAGCTTCGTCGAATACCGAGGCTCAAGCTGTCGAAGGCGAATATCAAGAAGAAACGAGTGAACAAGCGTTCGAAGAAGAACAGATAGTCAAGTTCGAGGAACAAGAAATTGTGAAGTTCGAAGAGCAAGAAATAGCAGAGGAATACGAACAAGTATACGAACAGGAGTATGAGGAAACGTCTAGGGAGGCATCGGACGCAGCGGATGTTATAATGAACATGGAGGATACCGTTTATACCGAAGAGGTGACCGCGGAAAGCATTGAACCTGCAGAAATTATTACGGACGAGATAATGACGAACGAGATATTACAATCTGGTGCTGTGGTTCATTTGCAACAAGAGGACGACTCAGGAAAAATACAAGTGATACCAGTGATGCTGTCCTTACCCGATTTATCTGAAACGAACACGGAGGTCAATTTAGCCACGGCATCCATTATGTATAATAATTAA
Protein Sequence: MQHIEVNNKDHNYSEVKLHNTSNNIKSEGDSDVKTVYKSNKSGLPTSKEPFGQIKNINELKKITPRVKLLSHDANSLNELTKISLHNKQSAQKKLSITERTREELKKYCRTCAGLKVPLVDIFSEKGNQMRLSQQIKHLEEINPYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHFTLADTATRTVAASKVQATGSTEKQTETIVIHDDISPSTSKESEKPTAPSSYVSTSCPTKKEEVEQMSKKEKTTVEPQKSNVKDEIEIFEDMVINISSDDNDSIEEFDPDDPPFQPDSSDAAESDDELEAPNAKRRHIQSKENMKQFVFFSDNNFVLDKKINVSNPASYRYDTGLKTYVKVNKMDGNDCSVASHATAKTEVENAKESKQPNILKRRLLSQCKKESTEEVENDSDKNYKDFKVQKLDVNNSLNLSTSQEDGIMYVTVKGSKPNELLLVKVKKMDKPVDKKDEKFIGKKGFDITPVEKILKRYESLATKEKDLFPERTKKAEMREQIIEEQIEEYKKKREKVLGGHNSISESLKLEESQSRYFKRNESQDKQKPITKVDSDSAPAAESMQIDKDDSQLDNSIITIESDVSESVESVKELSPNDKSYANTDEYLSRLSKLKLKWEEAKKKKESLQKELDESYTEGNIEKLARILGEKEKNLQDFQEYLKQRKIVITRLKNEDIISLYEDRNNAIFKNNLPDLIDESHPLDYIPEEHYLECDYCPQTFASKEVLEEHLKRHDYKIMHFCEDCMEEFPTNKAKRSHNVICIKKLLCRYCGIMLDSKGKKRQHEQKHYDSMFGQLCDVCGEKFKHQSTLDQHVKTQHMSWEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECQVCHKLVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKSDSRGLKECSCQVCGEKFPNQSTLVIHRNRVHKDGRQYTCHICNRSMISTRSLEWHMSHIHNESLPREEVDGSSTEKRRASCHHCNKTFKTEMILRTHIKNTHMEKDPMKCLDCELTFTSEVRLRHHMMVTHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVLGRNIKSKVQQDSSCSDQDQEASSNTEAQAVEGEYQEETSEQAFEEEQIVKFEEQEIVKFEEQEIAEEYEQVYEQEYEETSREASDAADVIMNMEDTVYTEEVTAESIEPAEIITDEIMTNEILQSGAVVHLQQEDDSGKIQVIPVMLSLPDLSETNTEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00684931;
90% Identity: -
80% Identity: -