Ccal004812.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratina calcarata
Gene Symbol
ZNF236
Assembly
GCA_026724355.1
Location
JAKKRE010000004.1:959252-966781[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00012 0.014 16.4 0.9 2 23 162 183 161 183 0.96
2 25 7e-06 0.00085 20.2 0.3 1 23 189 211 189 211 0.99
3 25 1.4e-06 0.00017 22.4 0.7 2 23 217 238 217 238 0.97
4 25 0.0073 0.89 10.7 0.2 3 23 246 266 244 266 0.96
5 25 0.00017 0.021 15.8 0.9 2 23 277 298 277 298 0.98
6 25 7.3e-07 8.9e-05 23.3 1.1 1 23 319 341 319 341 0.99
7 25 1.3e-05 0.0015 19.4 0.8 1 20 347 366 347 369 0.95
8 25 2.7e-05 0.0033 18.4 0.8 1 23 375 398 375 398 0.96
9 25 0.0029 0.36 11.9 1.9 1 23 407 430 407 430 0.97
10 25 3.3e-06 0.00041 21.2 3.3 1 23 550 572 550 572 0.98
11 25 0.00031 0.038 15.0 3.3 1 23 578 600 578 600 0.99
12 25 0.018 2.2 9.5 2.4 1 23 606 628 606 628 0.97
13 25 0.0033 0.4 11.8 6.4 1 23 711 733 711 733 0.98
14 25 3.3e-05 0.004 18.1 5.1 1 23 739 761 739 761 0.99
15 25 2e-05 0.0024 18.8 1.3 1 23 767 789 767 789 0.98
16 25 0.00028 0.034 15.2 7.5 1 23 795 817 795 817 0.98
17 25 0.25 30 5.9 1.4 2 23 1168 1189 1167 1189 0.95
18 25 1.5 1.8e+02 3.4 0.7 1 13 1225 1237 1225 1241 0.87
19 25 1e-07 1.2e-05 26.0 1.4 2 23 1317 1338 1316 1338 0.98
20 25 0.00071 0.087 13.9 3.5 1 23 1344 1366 1344 1366 0.99
21 25 9.2e-05 0.011 16.7 1.9 1 23 1372 1394 1372 1394 0.98
22 25 0.0029 0.36 12.0 3.7 1 23 1400 1422 1400 1422 0.98
23 25 3.1e-06 0.00038 21.3 0.3 2 23 1628 1649 1627 1649 0.97
24 25 1.3e-05 0.0016 19.3 4.5 1 23 1655 1677 1655 1677 0.98
25 25 7.7e-07 9.4e-05 23.2 0.7 1 23 1683 1706 1683 1706 0.97

Sequence Information

Coding Sequence
ATGTTGACGCGACACAACACGAATACAGACCCTCGCATTGAAGCGATACCACTGAATCTCGTTGCCAGTGAAGACGGTCGAACGCTCCTAACGGTGACAGAACGCAAAGATGGTACGTTAGAAATCGTCGCGACGCCAATAACTCTTATCGGACAAACCGGAACAACTTCGTTGGCCGCTCCTATTCTACAAATAAGCTTAGAAGATATTGTAAATGAATCGGAACTTCAGTCGGCAACTCAAACTCTCGATATTGAGCCTGAAGCTGTCATCGAGCCGATGAAATTACAATCATGCATAGAAATAAAATACAGCAATATTGGTACGCACGAGAGTCAGTCTCTTTTGCAAAGCCCTTTACTGGCCATAGACAGCGAAAAAGATGATGGAAATTATAAGCCAAACGAGCCGATCGTGAAGAAAAATAATGCTGGGAGACCTAAGAAAAATCCAGACGTCCCTCTCAAAGGCCCGGACAGTTTAAAGTGCGACATTTGCCAGCAAGAATTCGTTAAACAGTCCCTGTACCGAAAGCATATGGAAAATCACGCCGAGGAGAAGCCTTATAGATGTCCAAAATGTTCCGCGTCGTTCAACGTGCCGTCGAATTTCACGCTTCACATGGCGACGCACAATACGAGCGAACCAAAATGTCCAGAGTGCGGCAAGAAGTTCACGAGAATGGCTAGTCTAAAATCGCACATGTTGTTACATGAAAAGGAAGAGAACTTATTCTGCACGGAATGCGAGGATGCTTTCTCGACGAAAGCACAATTGGACGCGCATTTGAAGCTTCACGGGGAAAAGTGGACGGTGGAGGAAGTGCGGAAATGTAAATTATGTAGTAAACAATTTAGTCAACCCGCTCTGTACAGGCTTCACATCCGTGAACATTACAGGTTGAAGACAAAGATAGTGAAGCAAACGAAAAGAGGAACGAAACAGAAAATGATGTACAAATGTACGATATGTTTAAAGTCATTTCAGAAACCGAGTCAATTGATGCGACACATAAGGGTGCACACCGGTGAAAAACCGTTCAAGTGTACAGTGTGCGACCGCGCGTTTACACAAAAGAGCTCGCTGCAAATTCATACCTGGCAACACAACGGTATTCGACCTCATACTTGTGAACTGTGCAACGCGAAGTTCAGCCAAAAAGGCAATTTGAATGCTCATGTAATGAGGGTTCACAACGTACCGGAAGGAGAGTCTATATACGCGTGCAATTATTGCTCGTGCGTGTTTAAAAAGTTGGGTAGTTTGAACGGACACGTGAAACGCATGCATAACGACGCGAACGAGGAAGTCAATGGAAGTCCCGACGATGATCCCGATATTCGTGCGACCGTCGACACTGTTATAACGCAGCTGGAATCGCTTAAACAAGCCACGAATCAAACGTCGAAAATGTCTGATCCCGAAACGACTGCGTTATCGGAAACTATTGCGAAAAAAGATATTCTCCAACAAGCTTTGAAAAACAGTGGCCTTCCCAGTAAAAACAAAGCAACTGCCGAAGGCACGGCAGAAACGAAAAAGTGCGAGTCTCGTACGAGTTTCGTTACGTTATTAGATCGATCGCCTGACGGTGGTGCAAGGAATTATTTAACAATAAAGCAACGATGCGTAGGAAACGTTAGATGGTACTCGTGCACGTTTTGTCATAAAGAATTCAAGAAGCCTTCAGATTTGTTACGTCACCTGCGTGTACATACGCAAGAAAAACCTTTTAAGTGCACGCACTGTTACCGTTCGTTCGCTCTGAAATCCACGATGATAGCGCACGAACGTACCCATTCGAACATTAAAAAGTACGCTTGCGGTTTTTGCGATAAAACGTTTGTCTGTCATAGCAGCTTGGTTGCCCATGCCAAATCGCACAAAGAGTCGGACAAGTCTGCGGACAAAGATGCCGAAGTGCAAAACGGTACTCCTGCCTATACTGTCAATCAGTCGAAAGCCCAAGCGAAGGGTAAATCGAGATTACCTCTCGAAGCGGAAAATCTGTCTGAAGTGATTCTACAGGAACCGTTGGTGATAAGCGATACGGGGAACAAGATTTGCGTGGCGCAGGTACCCTCGAAGGAGAAAcgcagctgcgacggaaacacggatcccggcaggccacacacgtgctggatttgccaggcggcgtttaggaagatcagtcatttgaaacagcatcaccgtcgccacaccggggaacgtccgtacaaatgcacaaaatgcgacaggagattcacgtcgaacagcgttctaaagtcgcacctgcacacgcacgaggattcgaggccgtacagttgtaccatatgcagcgcgagattctccacgcagagtagcatgaagagacacttggtcactcacagcaacaagaggccgtacatgtgtccgtattgtcacaagactttcaagacgtacgtcaactgtcggaaacacatgaagatacacaagtacgagCTGGCGCAACAGCAACGGCAGCTCGAACAGGAACGAATACAAGTGCAGGAACAGGATTCGATTGAAACAAGCTTGGAGTCGAGATCGAAACAAGAAGCTGTCGTGGAATCGTCTTCTACTTCTATCGCTAGCATCGATCCTACCATCGCCATCACTACCACTGCCGTCAGTACGCCCACAATCATCGCAACGTCTTCTTCCACGTTCCCAACGCTTTCTCGCCTCGGCCCAGTGGAATTGTCGTTTCAACCGCAACTCGGACCAGAGTTTTCCCAAACCTTCCCCGAGTTCCGTGCCGTGACCGAAGACAAAGAGAACGGGAGACCCGTTTTATCGTCGAACTGCGACGGAACCACGTTTATCAATGAAACCGCGTCGGATATAGCTGTAATGAATATTGAAAATTCGCAGATGTTGCACACCGACGAGACTGGCTCGGTGACGTTGCCCGTTTACTCAGGCGATCGGGCATTCACTCCGGAGAGCATCCGAGATATAGAGGAGACGTTGAACCAGCAATTGTTTAACATCGGGATGAACCTTAATCTCGGGAATCACAATTCGAAGCTAGTAAACGCGAGCGATGTTATTTGTCAAACGAAGGAACAACAGGAACCGGCCGTGCTGAACGTGATATACGAAAACGACAGCACCAACCGCAATGGGGAACCATCTGGCCACGTATTCTCGTCACAATTAGATTCCTTTGACATGGATCACATCGGCTTGCAATCGGACGCGCATGAGATCGACATTGCATTGAATGCAACGAATCCGAACGACGTGACGAGTATGCTAACGCGGAGTTCGAAGCAGGAGCATCAGTTGTCCGTTTGCGTAGCGGCGTCTGACAACGCGAACGACGATAGAGAAGAGAGGTCCGGTATGCAAGCGAAGACTGATCAGCAGTGTACCATCGATCCAATATTTTTAACAAACGAGCTACGGGAACCGACACAAGAGTTCAAGATCCGATCGTCCAACGTTCAAGAGATGGTTAAAACCGTCACGGGGAAGATATCTCGCGGAGAATCTCTGCTACAGTGTCATATATGTGGCCAGCAAGGATTCACAACGATGAGATTGAAAGAACATCTAATGAGCCATCGATACGGTGGAACGAAGGAGTATCAGTGTACGGAATGTTCGTCGAAATTTCTTGCAAACGCTGGATCACACAGACATTTGAAGACTCGTACTGACAAACAATCATTCAAATGCCCAGCGTGCGAGAAGCGCTTTGACAAAAGGACAGAAACCCGGTCACAAGGTGAAAGTCGTACCACGTGGTCTGGAATATCTTCGGGAACAAACTGCGGGACGATGGGAGCAATCACGGATAACCGCACGGCTCTAGACAATATCGTTATCGATTCAGATTCCGCTGTTTCTGAAAAAGTCCTTTTAGACACAGTGGCTGAGAAAGAAGTCATGGATTGTGTAGAGACCATCTTAATGGAGaaagaagagcgaaaggagtacacgaacaaatgcaagtactgtccgaaaacgtttcgcaagccgagcgatttgataagacacgtgcgtacgcacacgggcgaacgaccgtacaaatgcgactattgcagcaagagtttcgctgtaaagtgtacattggattcgcatacgaaggttcacaccgggaaaaagacgttccgctgccacgtgtgcaacagtctgttcgcgaccaaaggcagcctgaaggttcacatgcgtttgcatacggGTTCGAAGCCATTCCGATGTCCATTTTGCGATTCGAGGTTCCGAACGTCGGGTCATAGAAAAGTACATTTATTGAAACATACGCGGGAACATAAAGACAACCCGAAGAGGAAACCGAAACATATGAAAGTAGCGGCAGTGGCCCAAGTTGCGGCCGACCTAGAAAAGTGCAACAGCGAAGTAGAAAGGAAAGAGAACGAGGAGGCCAACAGGCTTGAAACGAAACATCAACTACTACAGATTACAGAAACGGCTACGGGAATCGGTCCCGACTTTGGGACGTTCAATATCGAAGCAACGGCACCTTGTTTGACGGATCAAATAAATTTGGATGCTGACGGTATCGTGTCGAGCAATGACCAAACGATAGTGTCGATAGGTGAAAGCAACCAATTGGTTACAAATCTGCATTTTCTTTTAACGGACGGACTCGTCGCTATACACACCGAGGAATCATTACCGCCGCAGTCGATCGGGAATCGATGCGAAGCGCTGAATCCAAATACTGAAAGTACCAACGAAAAAATGAACGCGGAACATACAGAAGAAGCATTGGAAATACCAGATATATCAAATAATTGTTTATTGAGCGAAGCGATGGCGAATACGCAGTTGGAGCCGATTTCGAAGGCACCCGGAAAAAAGGAAGCGAGGCCAGAAAGGTCGGGGACGAAAGGGAATTCGAACTCGAAGAAGgagtgcgatatctgtggaaaagtgtttacgaaaccgtatcaagtcgagaggcacaaacgaattcatacgggagaacggccgtacaaatgcgatctctgtacgaaatcgttcgcccagaaatcgacgttgcagatgcaccaaaagcatcataccggagatcgcccgtatgcttgtccctattgcgaatactcgttcacgcagaagggaaatcttcgaacacatgtgaaacgtgttcaccagttggacaccgtCGACCTGAGAAAGTGGAAACGAACGCAGCAATCGAAGCCCATTGTCGAAGAGGACGCGATCGAAGTTAAAAGTCTAAATTTGGACGACATATCGTTCGTCGAATTTCTGAAATAA
Protein Sequence
MLTRHNTNTDPRIEAIPLNLVASEDGRTLLTVTERKDGTLEIVATPITLIGQTGTTSLAAPILQISLEDIVNESELQSATQTLDIEPEAVIEPMKLQSCIEIKYSNIGTHESQSLLQSPLLAIDSEKDDGNYKPNEPIVKKNNAGRPKKNPDVPLKGPDSLKCDICQQEFVKQSLYRKHMENHAEEKPYRCPKCSASFNVPSNFTLHMATHNTSEPKCPECGKKFTRMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWTVEEVRKCKLCSKQFSQPALYRLHIREHYRLKTKIVKQTKRGTKQKMMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCDRAFTQKSSLQIHTWQHNGIRPHTCELCNAKFSQKGNLNAHVMRVHNVPEGESIYACNYCSCVFKKLGSLNGHVKRMHNDANEEVNGSPDDDPDIRATVDTVITQLESLKQATNQTSKMSDPETTALSETIAKKDILQQALKNSGLPSKNKATAEGTAETKKCESRTSFVTLLDRSPDGGARNYLTIKQRCVGNVRWYSCTFCHKEFKKPSDLLRHLRVHTQEKPFKCTHCYRSFALKSTMIAHERTHSNIKKYACGFCDKTFVCHSSLVAHAKSHKESDKSADKDAEVQNGTPAYTVNQSKAQAKGKSRLPLEAENLSEVILQEPLVISDTGNKICVAQVPSKEKRSCDGNTDPGRPHTCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYSCTICSARFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKIHKYELAQQQRQLEQERIQVQEQDSIETSLESRSKQEAVVESSSTSIASIDPTIAITTTAVSTPTIIATSSSTFPTLSRLGPVELSFQPQLGPEFSQTFPEFRAVTEDKENGRPVLSSNCDGTTFINETASDIAVMNIENSQMLHTDETGSVTLPVYSGDRAFTPESIRDIEETLNQQLFNIGMNLNLGNHNSKLVNASDVICQTKEQQEPAVLNVIYENDSTNRNGEPSGHVFSSQLDSFDMDHIGLQSDAHEIDIALNATNPNDVTSMLTRSSKQEHQLSVCVAASDNANDDREERSGMQAKTDQQCTIDPIFLTNELREPTQEFKIRSSNVQEMVKTVTGKISRGESLLQCHICGQQGFTTMRLKEHLMSHRYGGTKEYQCTECSSKFLANAGSHRHLKTRTDKQSFKCPACEKRFDKRTETRSQGESRTTWSGISSGTNCGTMGAITDNRTALDNIVIDSDSAVSEKVLLDTVAEKEVMDCVETILMEKEERKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYKCDYCSKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFRCPFCDSRFRTSGHRKVHLLKHTREHKDNPKRKPKHMKVAAVAQVAADLEKCNSEVERKENEEANRLETKHQLLQITETATGIGPDFGTFNIEATAPCLTDQINLDADGIVSSNDQTIVSIGESNQLVTNLHFLLTDGLVAIHTEESLPPQSIGNRCEALNPNTESTNEKMNAEHTEEALEIPDISNNCLLSEAMANTQLEPISKAPGKKEARPERSGTKGNSNSKKECDICGKVFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACPYCEYSFTQKGNLRTHVKRVHQLDTVDLRKWKRTQQSKPIVEEDAIEVKSLNLDDISFVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-