Ccal014236.1
Basic Information
- Insect
- Ceratina calcarata
- Gene Symbol
- kn
- Assembly
- GCA_026724355.1
- Location
- JAKKRE010000008.1:2037272-2061904[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-90 1.1e-85 288.7 0.1 39 182 20 163 14 163 0.98
Sequence Information
- Coding Sequence
- ATGAGGCAGATACTGAAGGAGGAACCGGTGCCACGTGCTTGGCCACAGCCCGCGCTCGCCGATAACGGGACAGTCGGTGTGGGCAGAGCTCATTTCGAGAAACAACCACCGAGCAATTTACGAAAGAGTAATTTTTTCCATTTCGTGATCGCTCTCTATGATCGACACGGCCAGCCTATCGAGATAGAAAGGACTTCCTTCATGGGATTTGTGGAAAAAGACCAGGAATCCGAGGGCCAAAAAACGAACAACGGCATTCAATATAGTCTACATCTACTGTACTCTAATGGTGTCAGACAGGTGCAGGACATCTACGTGAGGCTCATTGACTCTGCAACGAAACAGGCTATCATGTACGAGGGTCAGGATAAAAATCCTGAAATGTGCAGGGTTCTTCTTACTCACGAAGTTATGTGCAGTCGGTGTTGCGATAAAAAAAGTTGCGGGAACAGGAACGAAACGCCAAGCGACCCAGTGATCATCGACCGGTGA
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773584;
- 90% Identity
- iTF_01537633;
- 80% Identity
- iTF_00385067;