Ccal014238.1
Basic Information
- Insect
- Ceratina calcarata
- Gene Symbol
- kn
- Assembly
- GCA_026724355.1
- Location
- JAKKRE010000008.1:2105481-2112336[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-106 6.4e-102 342.3 3.8 229 506 1 277 1 278 0.87 2 2 0.021 2.8e+02 0.1 10.5 444 516 248 320 235 336 0.67
Sequence Information
- Coding Sequence
- ATGTTCGTTCACAACAACAGCAAACACGGCCGTAGAACGAAACGATTGGATCCCAGCGATCCTGGCGAGTACAACAGTCTCTACACGCCAGTGCCGCTGCAAACGCCGTGTATAAAGGCGATATCGCCGAACGAAGGTTGGACATCCGGTGGATCCACGGTAATAATTATTGGCGAGAACTTCTTCGACGGGCTTCAAGTTGTTTTCGGATCGATGCTAGTTTGGAGCGAGTTAATTACACCAAATGCAATTAGAGTACAAACTCCACCACGACAAATACCAGGCGTCGTTGAAGTCACGTTATCTTATAAGACTAAACAATTCTGTAAAGGAGCACCTGGTAGATTCGTTTATGTCTCATTAAATGAACCAACGATCGATTACGGCTTCCAAAGGTTACAAAAGCTTATCCCACGGCATCCTGGTGATCCAGAGAAATTACCAAAGGAAATTATACTGAAAAGGGCGGCGGATCTCGCGGAAGCGTTGTATAGTATGCCTAGGAGTGGAAACGCTGGTATCACAGGAGCGCCGAGAAGTCCGGGTTCGGGGCATCCAACAGCACCTCCAACTTCTAGTTCGGCCACGGCGTTCAATTCGTATACAGGACAACTCGCGGTGACGGTACAGGAAAACGGTAGCGCGGCGAAATGGACAGACGACGGTAGTTCCGTGACGACAGGAGCTGGTGCTGGCGGCGGAGCCGGCGGTGGCGGCAGCGTTGGGGGTAGCGTCGGTGGTAGTGCCGACGCTTACAGGCAAAGTAGCAGCGCGAGTCCTCGCGGAGTCGTAACTGGCGGCGGTTATTGCGGAAGTTCGGCTAGCACACCGCACAGTCACAGCACGAATGGAAGTTATTCCGTGGCTAACCCGTACACCGGTAGTCCAACACTTTACACGTCGCGACTAGGCGAAGTGGTCGGTTCACCGTTCAATGTGAATCCGTTTATGTTGCCCACCTGCAGCCAGGGATATTCAAACGCCGCCAGCCCGTTGCTCTCCTCGAACGGCAAATAG
- Protein Sequence
- MFVHNNSKHGRRTKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPTAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAGAGGGAGGGGSVGGSVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNVNPFMLPTCSQGYSNAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_00360699;
- 80% Identity
- -