Ccal024044.1
Basic Information
- Insect
- Ceratina calcarata
- Gene Symbol
- Kdm5
- Assembly
- GCA_026724355.1
- Location
- JAKKRE010000010.1:3361598-3367905[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-25 5.2e-22 78.6 0.0 2 89 109 192 108 192 0.94
Sequence Information
- Coding Sequence
- ATGATATCGAGGTTCGACGGGAGCTTCGGTTGTGACGGTTTTTTCGGGACTTATAATTGCTACCAAAATATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCGCCACACCGCCAGAGGCGCCGGTCTTCGAACCGAGTATCGAGGAGTTTCACGACCCCCTCGCTTATATCGCGAAAATACGACCGATCGCGGAAAAGTCTGGGATTTGTAAGATCAAACCGCCGCCAAACTGGCAACCACCATTCGCAGTTGACGTTGACAAATTTAAGTTTGTCCCAAGAATACAAAGATTAAACGAACTGGAAGCAAAAACCAGAATAAAACTTAATTTCTTGGATCAGATTGCAAAGTTCTGGGAATTACAAGGTTCATCTTTAAAAATCCCTCTTGTTGAACGCAAAGCACTTGATTTATATTCCTTGCATAAGATAGTTACTGATGAAGGTGGAATAGACGTCGTGACGAGGGAAAGGAGGTGGGCAAAAATTGCTAACAAATTAGGCTACCCTTCGGGACGCAGTGTAGGAAGTATCTTAAAAAACCATTATGAACGTATTTTATATCCATTTGACGTATTTAAGCAAGGGAAAACACTGGCAAATATTAAAATGGAACCAGATTCGAACGTAAATGAGAAGAAGGATAAAGATTATAAACCTCATGGAATTATTTCGCGACAACAGATTAAACCTCCGACTGAAAAATTTTCACGTAGATCAAAGAGGTTCAATGGCCAGGAAGAAAAGCAGGAATCGCCCATTAAACAAGAAGATTGTAAGGAAGAATATGATTCCGATAGCGATTGTAAAGATGGAATCAAGAATAATGAGTGTGTCGATGACAAAGATAGTAAAGAACTTAAGAAATTACAATTTTATGGAGCTGGCCCAAAAATGGCCGGATTTAATACCAAAGAAGGAAAGAAATCTAACAAAACAAGGGGTATGAAACGTGTTTATGACATTGATCCATTGGCAAAGTATATTTGTCACAACTGTAAGAGAGGTGATAATGAAGAGAGCATGCTGTTATGCGATGGATGCGACGATAGTTATCATACCTTTTGCCTCTTGCCACCGTTGACAGAAATACCGAAAGGTGATTGGAGATGTCCAAAGTGTGTCGCGGAAGAAGTTTCTAAACCAATGGAAGCATTTGGGTTTGAACAGGCACAAAGGGAATATACTCTTCAACAGTTCGGAGAAATGGCTGATCAGTTTAAAAGCGATTACTTTAATATGCCCGTACACATGGTTCCAACATCATTAGTGGAAAAAGAATTTTGGCGAATAGTTTCGTCAATTGATGAGGACGTTACTGTCGAATATGGAGCAGATTTACATACGATGGATCATGGATCTGGATTTCCAACGAAAACTAGTGTCAATTTATTTACGTGTGATCAGGAATATGCTGAATCCTCGTGGAACTTAAACAATTTGCCGGTTCTGCGTGGAAGCGTGTTAGGTCACATCAATGCTGACATCAGTGGTATGAAAGTACCATGGATGTACGTTGGAATGTGTTTTGCAACATTTTGCTGGCACAACGAGGATCACTGGAGCTATTCTATTAATTATTTACATTGGGGAGAACCGAAAACGTGGTACGGCGTGCCAGGCTCGCGAGCAGAACAATTTGAACACTCGATGAAATCAGCAGCACCAGAACTGTTTCATAGTCAACCAGATTTACTTCATCAGTTGGTCACTATTATGAATCCTAACATTCTAACAAAGGAAGGTGTTCCAGTATTTAGAACTGATCAACATGCTGGCGAATTCGTGGtcacatttccgagagcgtatcacgcaggttttaatcaaggatataacttcgctgaagctgtgaattttgcTCCCGCTGATTGGCTCAAACTTGGACGGGACTGTATCAGCCACTATTCGAATTTAAGACGTTTCTGCGTGTTTTCTCATGATGAACTGGTGTGTAAAATGTCATTGGATCCAGATGCACTTGACATAGGAATCGCAACAGCAACTTACCACGACATGCTCCAAATGGTAGACGATGAGAAAAAACTACGGAAAAATCTACTAGAATGGGGTGTAACAGAAGCAGAAAGAGAAGCATTTGAACTTTTGCCAGATGATGAAAGACAGTGTGAAGCGTGCAAGACAACTTGTTTCTTGAGTGCAGTTACATGTTCATGTCAGAGTTCTCAGTTAGTTTGTTTGAGACATTTTACGGAACTTTGCGACTGTCCACCAGAGAAGCATACATTACGTTATCGTTACACGTTAGACGAATTACCAATTATGTTACAAAAATTAAAATTAAAGGCAGAGTCATTTGATCATGGGTAA
- Protein Sequence
- MISRFDGSFGCDGFFGTYNCYQNMACDRGDSDFEFATPPEAPVFEPSIEEFHDPLAYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIDVVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLANIKMEPDSNVNEKKDKDYKPHGIISRQQIKPPTEKFSRRSKRFNGQEEKQESPIKQEDCKEEYDSDSDCKDGIKNNECVDDKDSKELKKLQFYGAGPKMAGFNTKEGKKSNKTRGMKRVYDIDPLAKYICHNCKRGDNEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEQFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTKEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKLGRDCISHYSNLRRFCVFSHDELVCKMSLDPDALDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDHG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00686984;
- 80% Identity
- -