Crub004289.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cerastis rubricosa
Gene Symbol
nfxl1
Assembly
GCA_949152445.1
Location
OX424524.1:25695325-25697805[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 2 4.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.011 2.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 4.9e-08 0.0012 20.2 15.4 3 19 186 202 185 202 0.96
4 17 1.1e-07 0.0026 19.1 10.3 3 19 239 255 237 255 0.92
5 17 1e-08 0.00024 22.4 12.1 1 19 290 308 290 308 0.99
6 17 4.4e-06 0.1 14.0 19.0 3 19 345 361 337 361 0.86
7 17 1.2 2.9e+04 -3.4 0.4 7 11 365 369 365 369 0.84
8 17 6e-06 0.14 13.5 18.3 1 18 395 412 395 413 0.97
9 17 4.5e-10 1.1e-05 26.7 14.0 1 19 422 440 422 440 0.99
10 17 0.0002 4.8 8.6 6.4 9 19 488 498 486 498 0.89
11 17 0.076 1.8e+03 0.4 9.9 1 12 508 518 508 518 0.90
12 17 0.35 8.2e+03 -1.7 3.6 14 18 547 551 547 552 0.87
13 17 0.1 2.3e+03 0.1 0.5 7 12 567 572 567 579 0.83
14 17 9.1e-06 0.21 13.0 5.3 1 11 588 598 588 599 0.97
15 17 9.4e-06 0.22 12.9 14.4 1 18 628 645 628 646 0.93
16 17 4.2e-06 0.098 14.0 12.0 1 18 687 705 687 706 0.89
17 17 2 4.7e+04 -4.5 1.0 6 10 736 740 736 741 0.84

Sequence Information

Coding Sequence
atggcgcGCAGATATAGAGACGCTGCTGCAAAATTGCAGCAAAACGTCCAAAAACATCTTAAAGATATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAGTCTGGCGTTTTGGAAACCATGTTCCAGAGCTACTGGCGTGGCGGCGGCGACACTCAAATGCTCAACAGGACCAAAAACCTCCTTGAAGAAGCTATCAGCGGCCGCTCAGTTACTTGTCTCATATGCATAGGATCCATCAAAAAATCTCACGCTATTTGGACTTGTGAGCATTGTTTCTCATACTTCCATCTGTCTTGCATTCAAAAATGGGCTAACGATAGTATTAGCTTACGTAGCGAAGAAAGTACGGGTCCAATAGCTGTAATAAAACAACAGAAAATTGAGTGGTGCTGCCCAAAGTGCCGTAACTCTTATTCTAAGGAAGAAATACCTCGAAAATATCGCTGTTTCTGCGGCCAAACTGAAGACCCACCACAACATCCTTGGCTCATTCCTCATACCTGTGGTGAAGTCTGTGGAAAGAGGTTATCTGCTGGTGATAATTGTAATCACAAGTGTATGTTGCTATGCCACCCTGGTCCCTGCCCTCCATGCCCACAAACTGTTAACGGCATTTGTTTTTGTGAGAAGGAACACAAGAGAGTGAGATGCAGTGCTGCTAAATGGTCCTGTGGCCAAAAATGTAAGAAATCTCTTTTATGTAAGACTCATTATTGTGAAAATGTCTGTCATGTTGGTGACTGTCCTGAATGCAGCTATACTAGTAATCAGTCATGTCAATGTGGTTCTGAAAAGGCTAAGAGACCATGCAATGATCCATTCTGGCAGTGCAAGAAGCGTTGTAACAAATTATTTTCATGCGGCTACCATAAATGTGACAAAATCTGCCATTCTGGCAGCTGCGGTGATTGTCCCAACTCTGGCACATTGTCATGTCCCTGCGGTGCCAACCAGCGCTTTGTTCAATGTCCAGATGTTATGGAAACCTGTTTAGGTACTTGTGGAAAAAGGCATGAAGATTGTGAACACAAATGCCCAGAAAAGTGCCACAACGGTAACTGCCCACCATGCCAAGTTTTAATTGAGAAGAAATGTCACTGCTCAACACATACAAGGTCCCTTCCTTGTAGCAAGGACTTCAAATGTGACACTAAATGTAGAGGGATAAGACTGTGTGGTAAACATGGTTGTGCAAGAAAATGCTGCAATGGTAACTGCCCACCGTGTGAGAAAACATGTGACAAAGGCCTCCAATGTGGTCGGCATAAATGTACAAATATCTGCCATCGCGGACCATGCTATCCATGCCCTCTAGAATCTAAAGTAACTTGTAGATGCAAAGAAACTTATGTCAGAGTCCCCTGTGGACGGGAACGGCAGACAAAACCTCCTAAATGCAACTTACCTTGCAAAATAAGGTACAAATGTGGTCATAGCGAAGAAAATAAACATTCATGTCATTTTGGTGACTGTCCACCCTGCAAAGCAATCTGTGACAAGGAGTATCCTAAGTGTAGTCACCATTGTAAAGCAGTGTGTCATGAATATGTTGCGGTGCTGTTCAAGCAAGTAGAGAAGCCAGCTACCCCGTGGGAAGTGCAACCTCCTAAGACCAAGATCATGACGTTAGATTGCCCACCATGTGACACACCAGTTTCTATGGTTTGTTTTGGAGAACATGAGGCAGATCAGCAACCTTGCCATTCAGCTTCTCGGAGGCCGTGTGGTAGAGAATGTGGAAAACCCTTGGCTTGCGGAAACCACAAGTGCACTTTACTTTGTCATCTTTATAGCCCTCTTCCTGAATATCCAAATGTGCCTTCCACTTGTAGGCAATGTAACAGAGAATGTTCAGTTCAGCGTCCTGAAAAATGTGGTCATAAGTGTTCCATAAGGGCCTGCCATCCAGGACCATGCCGACCATGTGAGATACTTGAACGTTTGGCATGCCACTGTGGAGTAACAGAAATATACCTACGTTGTCGGGAATTGTCTGCAGCTACCGAAGATATGTTATCATGTAAGCAACAATGTCCTAAGAACTTGGAGTGTGGTCACCGCTGCCGGAACACTTGCCATTCAGGAGCCTGTGGGAACCAAGTATGCACTAAGAAAACTAAAGTGCACTGCCCATGTGGTAGCATAAGAAAGGAGGCTCCATGTAATTCAGTTAGAAATGGAGAAACCAAGATACCATGTGATGAAACCTGTGAAGCTAAGAAAGCTGCTGCTAGAATAGAACAAGAGAAAGAGAAGCAGAGATTGAAAGTGTTAGAAGAAGAAAAGAATCGTAAAGAGTTAGCAGAGTATGAGTGGAAATTAAGCGGTAAGAAGAAGAAATATAAGGAGAAGAAGATGGTTGTTGATAAAAACAACCATGGTTTCCTAAAGAGGTATTGGGTGCCAATATCATCATTCCTAGTAACGATGCTAGCttctatttattatatattttatttaggatTAGAATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKELSSSEDEDPCESGVLETMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCEHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTEDPPQHPWLIPHTCGEVCGKRLSAGDNCNHKCMLLCHPGPCPPCPQTVNGICFCEKEHKRVRCSAAKWSCGQKCKKSLLCKTHYCENVCHVGDCPECSYTSNQSCQCGSEKAKRPCNDPFWQCKKRCNKLFSCGYHKCDKICHSGSCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRSLPCSKDFKCDTKCRGIRLCGKHGCARKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIRYKCGHSEENKHSCHFGDCPPCKAICDKEYPKCSHHCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVSMVCFGEHEADQQPCHSASRRPCGRECGKPLACGNHKCTLLCHLYSPLPEYPNVPSTCRQCNRECSVQRPEKCGHKCSIRACHPGPCRPCEILERLACHCGVTEIYLRCRELSAATEDMLSCKQQCPKNLECGHRCRNTCHSGACGNQVCTKKTKVHCPCGSIRKEAPCNSVRNGETKIPCDETCEAKKAAARIEQEKEKQRLKVLEEEKNRKELAEYEWKLSGKKKKYKEKKMVVDKNNHGFLKRYWVPISSFLVTMLASIYYIFYLGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01084816;
80% Identity
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