Basic Information

Insect: Cerastis rubricosa
Gene Symbol: -
Assembly: GCA_949152445.1
Location: OX424551.1:7414131-7435688[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.1 13 7.8 0.8 1 23 379 401 379 401 0.98

2 10 0.01 1.3 11.0 8.6 1 23 408 430 408 431 0.93

3 10 0.95 1.2e+02 4.8 2.2 1 23 435 457 435 457 0.97

4 10 0.11 13 7.8 2.0 1 23 462 485 462 485 0.97

5 10 0.0039 0.49 12.3 0.2 1 23 489 512 489 512 0.94

6 10 1.2 1.5e+02 4.4 0.4 2 23 606 628 605 628 0.94

7 10 0.039 4.9 9.2 0.6 2 20 644 662 643 665 0.91

8 10 2.8e-05 0.0035 19.0 1.4 1 23 671 693 671 693 0.99

9 10 4.9e-05 0.0061 18.3 4.5 1 23 700 722 700 722 0.97

10 10 4.1e-05 0.005 18.5 1.3 1 23 728 751 728 751 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.1	13	7.8	0.8	1	23	379	401	379	401	0.98
2	10	0.01	1.3	11.0	8.6	1	23	408	430	408	431	0.93
3	10	0.95	1.2e+02	4.8	2.2	1	23	435	457	435	457	0.97
4	10	0.11	13	7.8	2.0	1	23	462	485	462	485	0.97
5	10	0.0039	0.49	12.3	0.2	1	23	489	512	489	512	0.94
6	10	1.2	1.5e+02	4.4	0.4	2	23	606	628	605	628	0.94
7	10	0.039	4.9	9.2	0.6	2	20	644	662	643	665	0.91
8	10	2.8e-05	0.0035	19.0	1.4	1	23	671	693	671	693	0.99
9	10	4.9e-05	0.0061	18.3	4.5	1	23	700	722	700	722	0.97
10	10	4.1e-05	0.005	18.5	1.3	1	23	728	751	728	751	0.95

Sequence Information

Coding Sequence: ATGAGGTGCTGTGTGCCGACCTGCAAGAATGATTCGAGACACATATCGAAATCACAGGGAATCACGTTCCATGTCTTCCCCAATGAGTCATCACTCCGCAAGGCATGGCTTAAGGCTCTCGGCAAGGACTCGTGGGAACCGAAGGAAAGGAGTGCGGTGTGCTCTGAACATTTTCTATGCGAAGACTTGTACGAGACCAAGAGTGGCTTACGGAAGGTTAGGGCTGGAGCTGTGCCTTTGATAGTTCAGGATTCTACGAACTGTGATTACGGAGAGCCTGCCAGTTTGAAGGCTTGCAGAATCTGCTTAGTAATGGACGCGAATTTGATATCAATCAGAATCTATAAACTGGAACAAGCCTATCAGAACCTCACAGGAATATCAatatgtGACGAAGACAAATTACCACAGAAATTATGCATGGAATGCGTACAAAGGTTGCTAAACTGCAGTCGGTTCCGACACAAGTGTTTACGTGCCAACTCGCTCATGCTAGAGGTTGTTAAGAAGCAGGATTGTTTAACCGTCCAAAACATTAAAACGATAAACAGATTAAACAACCAGCTCACATCAACGTTATCACAAAAACATTTCGAAGTCAACCACTACGATTCTTCCATAGAAAATAACGACGAAGATAAACCAATAGAAATACAGGATAAATCGCCACATAATGTTGACATCAAAGAAGAAAACGAAATCTTTCTCACAGACGACATTTCAGACAAAAATGACGGTTTTAACGACAACGGAATCAACGCCGACGGACTTGACGACAACGGAGTCGACGAAACCGGAATAAAAGATGCTTTAGAAAAAGATGACGTTTCAGAAAAAGAATATGTGTTGTCTGACAAAGATCTGAACTATTCCTCAGACGATAGTCTTCCTTTAGAAAAATGTAAGACGAAAAAAACCAGAAAAAGAAAAGAGAAAGAGAAAAAACCGGTAAAGACAGTTAAAAGGGTTAAAAAGATCAAAGATCCGTCTGAACCGAAAATCGATCGGCGGAAAAAACCGTTTTTAAACGACGATTTGAACGAAACTCTTTTTACGATTACTGATTTGACTTTTGAAGAGCAGATTGCGGAAATAGTTAAGAGACAGGACAGTTCGAATTATAAGAATTCTGTGTTTAAATGTACGGCGTGTTTTAAAGGCTTCTTAGATGAAGATGCTTACAACAGCCATATGACGAGACATACAGATCAATGCGGCGAACACGAATGCGAGATATGCAAAACGCATTTCAAGCACCCTCATGCGCTTCGTAAGCACGTCACAGCGCACCACACGCAGCGCTTCAGCTGCAAGCAGTGCGCCTACGTCACCACGCACCGGCAGACGGCGCGCCTGCACGAGCGCTGGCACAAGGGCACTAAGTACCGGTGTCCGCACTGTCAGGACGAGTTCGTTAAATTCACAACGTACATGGGCCACATTCGCATCAAGCACCCGTCCGACTTCGTCTGCGAGCTGTGCGGGTACTCTTTCGTCAGCGCTAAGGGCATAGAGCTACATAAGAAGCTCAAACATCGTTTAGAGAATGTACAGataCCAGAAGATGGTCCACTTTGCGAGCCATGTAACGTTCGCTTCGTGTCTTCGGAGGCTCATAAACGACATCTGAGCGTTTCAGCTAGGCATAATACAGGTACCGATAAAAACTCAAGAGAATCTAACAAACCCAAAAAGGGGAGAAAATCTAAAGAATCCAAGGAATTGGAACGGAGAGCGCGAGAGAAAGACAAGGACGATACGGATGAAAAGAGACGGATATACCCGAGTCAGATGCGTAAGGCGGAGGGACCTATACCTTGTGAACAGTGCGGCATGCAGCTAGAAGATTCCAGGGCATACCACGGGCACTTCAGACGTATGCACCCGGACAAGAATCGAACGAACTACCCTTCGATGAAGTCACCCTGCATGTGCGAAGTTTGCGGGAGGATATTCCAAAGCTTCGCCCTTCTAAAAGACCACACATGGGTCCACACAGGGGAACGCCCCTTCAAATGTGATTCTTGCGGGAAATCGTTCCGGATGAAGCAAAGACTGGTCGCGCATAGACGAGTGCACAGTCAAGTGCGAGCGAGTTATGTGTGTGCGCTTTGTGGGAAGCACTTCTCGACGCATAGCAATCGGCAGAGACATATGTTTATCCATACCGGCTTAAAACCGTTCAAATGCGAGATGTGTGGCAAAGGCTTCAAGCACGCGAGCGAGAAACGAGCTCACATTACCTACGTACATCTTAAGAAGCCGTGGCCGAAGCGAGCGAGAGGGAAGCGGAGATCGGATACTAGACAGgGTCAGCTTGCACCACAAGATGAGGACATGGATATGCAAGCCCCCATGTGGCCACCTTGTGACCCCAAGATGGGAGAAATGGGTCCCATGATAGAGGACAAACCTGTGTACTATAACTTGAAGATTTAA
Protein Sequence: MRCCVPTCKNDSRHISKSQGITFHVFPNESSLRKAWLKALGKDSWEPKERSAVCSEHFLCEDLYETKSGLRKVRAGAVPLIVQDSTNCDYGEPASLKACRICLVMDANLISIRIYKLEQAYQNLTGISICDEDKLPQKLCMECVQRLLNCSRFRHKCLRANSLMLEVVKKQDCLTVQNIKTINRLNNQLTSTLSQKHFEVNHYDSSIENNDEDKPIEIQDKSPHNVDIKEENEIFLTDDISDKNDGFNDNGINADGLDDNGVDETGIKDALEKDDVSEKEYVLSDKDLNYSSDDSLPLEKCKTKKTRKRKEKEKKPVKTVKRVKKIKDPSEPKIDRRKKPFLNDDLNETLFTITDLTFEEQIAEIVKRQDSSNYKNSVFKCTACFKGFLDEDAYNSHMTRHTDQCGEHECEICKTHFKHPHALRKHVTAHHTQRFSCKQCAYVTTHRQTARLHERWHKGTKYRCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLENVQIPEDGPLCEPCNVRFVSSEAHKRHLSVSARHNTGTDKNSRESNKPKKGRKSKESKELERRAREKDKDDTDEKRRIYPSQMRKAEGPIPCEQCGMQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRIFQSFALLKDHTWVHTGERPFKCDSCGKSFRMKQRLVAHRRVHSQVRASYVCALCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRARGKRRSDTRQGQLAPQDEDMDMQAPMWPPCDPKMGEMGPMIEDKPVYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00038854;
90% Identity: iTF_00746209;
80% Identity: iTF_00302185;