Crub042320.1
Basic Information
- Insect
- Cerastis rubricosa
- Gene Symbol
- arid5b
- Assembly
- GCA_949152445.1
- Location
- OX424553.1:11419565-11434460[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-15 1.4e-11 45.9 0.1 3 89 231 304 229 304 0.90
Sequence Information
- Coding Sequence
- ATGAACGATTTCTTACTTGACGAGGTCCTAGCCATCAACGACAAGGTGGTGCTCCGCGCCGACGACCTGCTCTCATGGATGTGTGTGGGCACGGAGTGGCGCTGGGGGCTCCGGGCGGTGTGGCGCGGAGCCTGCGCCCCACCAGCCGACCTGCCGCGGCATGCACCGCTCACGCACACCAAGCTGGACTTCAGTGATGTTGATAGCGAGAAGAGCGCTATTGTGGTGGACACAGACGCGCCAGGCGTAGTGGTCTTCTCATACCCTCGTTACTGCCGCTACAGGGCACTCATAGCCAGGCTCGAAGGCATCCAGGCCTCCTGGCTAAGAGACTCCTTGGTGGCAGCCCTCGGAGGGTACGCGGCGCCGACCAGTAACACCAGGATACTGTACTGCAAGGACACATTCGAGTACCCAGAGCTGGAAGGTCACGAGTTCGTGTGCAACCACCTGGCTCCGCGCCTGAAGGGGAGGCCGCGCGGGCGCCGGCGCCGCGCGCACTCGCCGGACGTGACGCACGCGCACGACGAGCTCGGCTCTGACCGGTCAGACTCCGACGACCCGCCCGCTTGCGGGCCCGCTGGGAGTGACCCGCCGACCCCGCGGCGCCTGTCCCTCCGCAACGGCGCGCCCCCCCCCAGCGACGAGGACGACGAGGACTACCAGCGCGTGGAGCAGACTCCTGAGGACCGCGCCTTCCTGCAGCAGCTCAAGCTGTTCCACAAAAGCAGGAGCGAGCCCTTCAAGAGCGGACACACGCTCAAGCATTTATCTCTCCGCGCGCTGTACGTGTGGGTGGTGTCGCGCGGCGGGTACGAGGCCGTGAGCCGGCACAAGCTGTGGCGCGCGCTGGCGAGGGAGACGCCCGCCAGGACACGGAGACACTATGAGcgATTTCTCCTACCCTTCGAGAACCACGAGCGACGCACCGGCGGCACCTCCATATCCTTCAAACTAAACGGGAAGCTGGACGCGGAACCGCGCACCATCGCCACCATAGACGTCACAGACTCCCCACGACGAGATGAAGACGACAAGATCCTCCGCACCCCCTCCCCTACCCCCCACTACGACAAACTCCACCCCGACATCGACAGCGAGACTGGAGAAATAACCACCAAAGATGATATTGTTATCAAGAACGCGGAAGAACTTAATAGGGAGTTCTTGGAGTCGCTGCCAAAAGAAGAGAAGATGGTTAAGATATCGGTGAAGTCTGTCGACAAGCTGATTGAGCTGCCTCGGGTTGAGGATGTGGGGAAGGTGGAAGGGCAGAAAGAAGAGAGGGATTTTAGTCAGAGTTATTTGGGGGATTTGCAGAAATTTAGTATGGGAGCGGAGTCCCTCTCGTCTCGAGCGACGCCCGTCAACGGTCACGCCGCGCCGGCGCCCACTGACCTTAAGACGTCCCGGCCGGCGGGCCGCAGCTCGCTGCGCGCCGTGCGCGTCAAgccggcgcgcgcgcacctCACGCCCGCCAGCACTCCGCCGGGCCCCGCAGTCCCGCTGGCGCTGTCGCCGCCGGTGACGAACTTCGGCATCCACCGGCCGCCGCACGCGCCGCACTACGCACACGCAGACGACGACATCGTCGAGGTCCCCTACAAGCCGAAAAGCCCGGAAATCATCGATCTAGACGAATACCCCGAGAGTCCTCAAGCAGTAAAAAAGAAGAAACTGGACATACTGAAGGAAAGAGGTCTGGAAGTGACAGCTCTACCACCACCCTGGCAGGGAGTGGGCCCCATGATGGCACCGCCTATGATCCTCAACCCCGCAGTACAGCATCAGATCATGACCCAGGCGCAGCTGTTCCAGATGTACAACATCATACCACCTAACTATGCGAACGGCATTCAGCCTCCTAAAGTCATCCAGGCGTCCTCTATCTTCGGCAACACAGGGCCTGAGAAGACCGTCTACGGGAACCCTAAAGACCCCTTCATGCCACCCCCTCATGTTCTACACGGGGTGCCAGTGAAGCCGTTGAAAACTGCCCCCCCTCCGCCCACTCCTCAGGATATACTAGACCTCACCTGCAAGTCCTCCAGCCCTCCTCCTCAGAAACCTGCCGTGGAGATAGTAAGAGTACCTCCCTCTCAATCTCCTACTGCGCAAAACTTGACGAAGAATTACACTTTAGTTGATGGGAAGGCAGTTGTGGGCTCGAATTTAGAAATAACGTTAGTCAACAAAGCTCAAAGTCCTGGCAAGAATAGGCCTCCACAGAAACGGTCTAGCAATGGGAAGTTTATGTCAGGGAAGACTGGTACTCCCCCTAAGGAATCCTACCCCAAGTACACGTCCCCCAGCACAGCTCAGAGTCAGAAGAAACCTCCAATCAATATCCCCAGCTACCAGATCAGAGAAGACTCCTCCCCAACACAAAATCAAGTACTACAAAACGCAATGAAGAACCAGAACCTAGCTCAAATAATGGATTTGCAGAAGAACTCAGTTCCTATGACGTCTTTCATGGACCCTTACGTCGCTCTATACAGCAGTCTAGCGGGTCAGATGGACCAGAGGCAGCTGGCCATGTATCGGGACCTCATGACCAATCAGTTCAGATACCCAGGGCTCTTGAACCTGGGCGTCGCCACGCCGACAACGAAGAATTAG
- Protein Sequence
- MNDFLLDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSAIVVDTDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPDVTHAHDELGSDRSDSDDPPACGPAGSDPPTPRRLSLRNGAPPPSDEDDEDYQRVEQTPEDRAFLQQLKLFHKSRSEPFKSGHTLKHLSLRALYVWVVSRGGYEAVSRHKLWRALARETPARTRRHYERFLLPFENHERRTGGTSISFKLNGKLDAEPRTIATIDVTDSPRRDEDDKILRTPSPTPHYDKLHPDIDSETGEITTKDDIVIKNAEELNREFLESLPKEEKMVKISVKSVDKLIELPRVEDVGKVEGQKEERDFSQSYLGDLQKFSMGAESLSSRATPVNGHAAPAPTDLKTSRPAGRSSLRAVRVKPARAHLTPASTPPGPAVPLALSPPVTNFGIHRPPHAPHYAHADDDIVEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPPPWQGVGPMMAPPMILNPAVQHQIMTQAQLFQMYNIIPPNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPPPPTPQDILDLTCKSSSPPPQKPAVEIVRVPPSQSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKAQSPGKNRPPQKRSSNGKFMSGKTGTPPKESYPKYTSPSTAQSQKKPPINIPSYQIREDSSPTQNQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00374957;
- 90% Identity
- iTF_00711598;
- 80% Identity
- -