Cleu026660.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- ZNF296
- Assembly
- GCA_963082945.1
- Location
- OY720375.1:10491028-10509434[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.4 2.7e+02 3.6 0.1 3 23 120 140 118 140 0.95 2 15 0.0021 0.24 13.1 2.8 1 23 279 301 279 301 0.99 3 15 8.9e-05 0.01 17.5 0.2 1 23 307 330 307 330 0.96 4 15 0.0015 0.17 13.6 1.6 1 23 335 358 335 358 0.94 5 15 1.1e-05 0.0012 20.3 0.5 2 23 523 544 523 544 0.98 6 15 0.00022 0.025 16.2 3.2 1 23 550 572 550 572 0.98 7 15 6.2 7e+02 2.2 5.2 1 23 636 658 629 658 0.96 8 15 4.6 5.2e+02 2.6 0.1 2 23 666 687 665 687 0.92 9 15 0.066 7.5 8.4 2.2 1 23 693 715 693 715 0.96 10 15 0.00025 0.028 16.0 2.1 1 23 721 743 721 743 0.98 11 15 0.21 23 6.9 7.3 1 23 752 774 752 774 0.98 12 15 0.00062 0.07 14.8 0.6 2 23 830 851 830 851 0.97 13 15 0.01 1.2 11.0 3.8 1 23 868 890 868 890 0.96 14 15 1.9e-06 0.00021 22.8 0.7 1 23 896 918 896 918 0.98 15 15 6.4e-07 7.2e-05 24.2 3.1 1 23 924 947 924 947 0.98
Sequence Information
- Coding Sequence
- ATGAACCATGCAGCAGCCACTATACCAGGCAACATGGACGTAGACCCGCTGAGCTCGTACGAGTACCCACCGTACGAAAACTACGCAGGCCAAGCCTATCCATACCCCAACAAGCTACAGCAGTCCATCTACCAGGCGTACCAACAGACTAGCACAAACTACATCAACACTCAGCCCCAGGAACCCGTCAGCAATCCACTACCAACGTCACAAACAAGCATTGACATAGAGATACCGCCTAAAAATGAAGAAGTAGACCCAAAACCAGTTTTAAAAAagagaagaaaggaaaagaatgGCCAGAAAAGTACTTATTGTTCTGAAAAAATCACGGATGCTGCGTTTCAGTTCTATGGTTGTGCGGTTTGTAATGTGAGTTACAATGCTCTCCACGAGCTCGACCAGCACGTTACCGTCCATAAGGACAGAATGACCAGTTACAGACTGCGGTTAAGGAACCAATTTAAAaagaagcaaataaaaaaagaaaagaagaaattaaaaaagttgGTTAAAATTAAGAACGAAAACGAGTTCGATATAGAAATAAAACCAGAGGATGGATACATCGGTGAAGAAAAAGCaaaagattttattaataatgaaattaatCCGAATCCCGAACTAAATGGAAATgttgaaaatgaaaatagtGCAATTGAAGCCAAGGATAGTCAAATTAACACAAATAATGATATAAATTCTACGAATAAAGATTCTGAGAATATAGAAGCCAATTCTTTGAGTAACGGAAACAGCAAAGACAGTAGAAACAATGTGAACGGCAAAGAGAATAGTATGGATGAAGCAGAGTTAAATAATTTAGAGAAAATTTACAAATGTTTTGCTTGTCAGAAACAGTTTACTTTAAGCTATTATTTGAAACTTCATGTGAGATCACATACAGATGAAAAGCCGTATACGTGCGCTGTGTGCGGCCAGTCCTTCATCACGGCGAGCAAGCTCGGGAGGCACAACAAGCGTATCCACCTCGCTGAGCGCTACCAGTGCCGCATCTGCTTCAAGGTCTACTCGCGGTTCGAGCTACTGACCGCTCACTTCGACAAAACTCATCCTGAAGACAAGTTGGAGGGAGAACCGTACGACTACAACGCGATCCTGCCATACTTGAAAGAGTTAGAGGAGCAGCTCCGTGCGCCAGAGCAGGAGGGTGCGGCGTGCGAGCAAGACAGCAAGCCTGACGTTGACGAGCTGTTTTGGGAGCAGCAGGTTGGCCCAAGCCTGCAGCCGCCGCTCGCCGACCAGCCCGCACCCATCAAGGAAGAGGCTTTCGACGAAGACCAAAAGGAGCTGGTGCCTAAACTGGACATACTGATCGAGGAGGTCAAAGTCGACTTTGAAGTGCCGGTCAAGCGTGAGTTGTCGGATGACGAGGGGCCCGGTGACGTAGCGAGTGACGTGGGTATCGGTGACGTTGGAGACGGTGATGTCAAGGATGAAGATAGCCACTCGGACTCGGACTACTTCCCGGAGAACACGTGGGCGGCCCCCCGCGCGCGCTCGCCCCCCGCCCCCGCGCCCCCGGCCGTCCGCCGAGCCGTCCGCACCTGCGAGGTGTGCAACAAGAGCGTGAGCAGCGCTTCATACATGCGCGTCCACATGCGAACACACACCGGCGAGCGTCCCTTCAAGTGCTACACCTGCGGCCGCGGCTTCATCACCAGCTCCAAGATGCACCGGCATGTCCTCACGCATGCGCAAGacAAAGACGAGGTCAAAGCGGAAGGAGAGGACACAAAACCGGAAGTGACAGAAGAAGCAGAGGATAATCAGGAACATGACGAGGTCAAAAAACCGCCGAAGAAAAAATCCAAAATGAAAGCTAAAATCGCAAAAACGAAGAATAGCGATGAAAAGCCGCGACGAAAACATCAGAAGCGCCCGCACGCTTGCGAGTTCTGCAACCAGAAGTTCCTGCACCTGAATATGCTAGAAGTACACAAACAGTCGCATGCAGGCGAAGCGCTAGTGCTCCGCTGCCACTACTGCCTGCAGGACGCGCCGGACGACGCCGCGCTCCGGGAGCACGAGGCCACGCACTCGGGGGCGAAGCCCTACCTGTGCACGCTCTGCGGGAACACCTACAAGAAGAGGGAGACCATGGTGTACCACCGCAAGCGCCACGCGCCCGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGCTTCAGCGCCGCCTGCAAGCTCACCAAGCACCTGCTCACGCACCGGCGCGACGCCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACCAAGTACCACGTGCACATGCATCTCAGTACGCATCAGAAGGAGGGCTTGATCCTGGAAGAGAATCGTAGCGAGATCCTAGCGATGGTGCTACAGAACGCGCGCAAGATCCCGCGCGCAGGTCCCACGCCCCCCCTGCCGGCCGGAGCCCCCCCCCAGCCCGCAGCCGCGCCCCCCCTGCCCCCCGACGAGCGCTCGCGCGTCTGCAACATCTGCGGCGACGTCTTCTCACACTTCTACTACCTAGAGGAGCATCTCAAGAGCCACGGCTCCAGGATATCGATCGAGGACATCGACAAGGAAGAGGAGAAAAAGTACATTTGCACCGTATGCAATAAAGGTTTCAAGTTGCATTATTATTTGAAACTCCACAGCTTTACGCATTCTAAGGAAAAGCCGTTCATCTGCCAGCAGTGTGGCAAGGGATTCATTACTAAAGGGAAGTTGAAGAGGCATTTGGAAACGCATACAGGTTTGAAGAAATATCAGTGTCACATTTGTTACAAGTTCTTCACCAGACCAAGTTACCTGAGGATCCATGTGAGGACTATTCATGGTACTCAGGACTATAACTTCCGGTTTGACAAGGGCTATGGTGTGGGGTCGTTCGCTATGTCCATGACTATGTCTGATGTCAGTCAAAATAGTATTTAG
- Protein Sequence
- MNHAAATIPGNMDVDPLSSYEYPPYENYAGQAYPYPNKLQQSIYQAYQQTSTNYINTQPQEPVSNPLPTSQTSIDIEIPPKNEEVDPKPVLKKRRKEKNGQKSTYCSEKITDAAFQFYGCAVCNVSYNALHELDQHVTVHKDRMTSYRLRLRNQFKKKQIKKEKKKLKKLVKIKNENEFDIEIKPEDGYIGEEKAKDFINNEINPNPELNGNVENENSAIEAKDSQINTNNDINSTNKDSENIEANSLSNGNSKDSRNNVNGKENSMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAVCGQSFITASKLGRHNKRIHLAERYQCRICFKVYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAPEQEGAACEQDSKPDVDELFWEQQVGPSLQPPLADQPAPIKEEAFDEDQKELVPKLDILIEEVKVDFEVPVKRELSDDEGPGDVASDVGIGDVGDGDVKDEDSHSDSDYFPENTWAAPRARSPPAPAPPAVRRAVRTCEVCNKSVSSASYMRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDEVKAEGEDTKPEVTEEAEDNQEHDEVKKPPKKKSKMKAKIAKTKNSDEKPRRKHQKRPHACEFCNQKFLHLNMLEVHKQSHAGEALVLRCHYCLQDAPDDAALREHEATHSGAKPYLCTLCGNTYKKRETMVYHRKRHAPDKEFVCDVCSKRFSAACKLTKHLLTHRRDAFVLRYECPVCAHMFHTKYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGPTPPLPAGAPPQPAAAPPLPPDERSRVCNICGDVFSHFYYLEEHLKSHGSRISIEDIDKEEEKKYICTVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGVGSFAMSMTMSDVSQNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00928932;
- 90% Identity
- -
- 80% Identity
- -