Cleu016704.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cerastis leucographa
Gene Symbol
-
Assembly
GCA_963082945.1
Location
OY720365.1:6111957-6126144[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 5e-05 0.0057 18.3 6.9 1 23 191 213 191 213 0.98
2 13 6.7e-06 0.00075 21.0 0.3 3 23 227 247 226 247 0.97
3 13 7.8e-05 0.0088 17.6 2.0 2 23 256 277 256 277 0.98
4 13 0.00031 0.035 15.7 1.5 3 23 285 305 283 305 0.95
5 13 5.4e-06 0.00061 21.3 1.4 1 23 311 333 311 333 0.98
6 13 1.4e-05 0.0015 20.0 8.5 2 23 340 361 339 361 0.97
7 13 2.5e-05 0.0029 19.2 0.8 1 23 367 389 367 389 0.98
8 13 1.9e-06 0.00021 22.7 1.1 1 23 395 417 395 417 0.99
9 13 0.0011 0.12 14.0 3.2 1 23 423 445 423 445 0.98
10 13 0.0018 0.2 13.4 1.3 1 23 451 473 451 473 0.97
11 13 2.1e-06 0.00023 22.6 0.7 1 23 479 501 479 501 0.98
12 13 1.5e-05 0.0017 19.9 0.7 1 23 507 529 507 529 0.99
13 13 0.0002 0.023 16.3 2.6 1 23 601 623 601 623 0.99

Sequence Information

Coding Sequence
ATGGCTGCTCCCAATAAACCTTTGAAATTCGACAAAATATGTCGGGCTTGTTTAGAGATAAAAAAGGACATGAGACCCTTATTTGATCAACTCACAGCGACAATGCTGATGGGCATATCGAAAGTGCAGGTGGCAGTAGGCGATGGGCTACCTCCCCAGCTGTGTCTCCAGTGCGTGCACCAGATCTCGCGGTGCCACGCCTTTAAGGACATGGTGGAGAGGAACGACATCACGCTGCGGGAGCATGCCGCGAGGATGGCAGAGGAGGCCTTTAAAAGGGAGAGGGAGGAGAAAGAGAAACTGCTGAACCTGAACTGCACGGAGCCGTACATGCAGTACATGGAGGTTCCTCTCGCCAGCGCGAGTCAGATCCTGGACGGGTTCTTCACGGCCACGCCCGACCCGCCGCCTGCGGAGACGCCTGATGCAGAACTTAAACAAGACTTCGATGTTGAGAAGCTGGACACAGACCTAGTCCAAATGAAAGATAAAGAAGGTTTAAACTCTGACGAGGAAAACTACCTTCAACTGGTGTTGTTCCAAGCGACCTCCACGGTGTCTCCTGGACGTCACGTATGCAACCTGTGCCACAAGGAGTTCAAACATGCGCGATGGCTAAAGCAACATATGCGGTCTCATACAAACTGGATCAAGGCGAACTGTAAGAAGCCGCCCAGTTGCGTCATCTGTGATCGGACTTTCAAGGGCCCCGGCATGTTGAAGATGCATATGCGCACGCACGAGCAGCGCCCCGCTAAGCAGCCCACGTGCTCCGTGTGCCAGCGCACGTTCCCCAGCAAGACGCTGCTGTACCGCCACCGCCAGACGCACTTTGAGCAGAAGACGCACCTGTGCTCCGTGTGCGACAAGCGCTTCTACAGCGGGTACGCGCTGCGCTCGCACATGGCGCGCCATCGCGGCGAGAGGCCCTACGTCTGCACCAATTGTAACAAGAGCTTCTATAACCCGACGGATCTCAAGGTCCACTTCCGTCTGCACACCGGCGAGAAACCGCTGAAGTGTAACGAGTGCAACAAGACATTCAGGCGACATTCGACCTTATGCCAACATATGAAAAAGCACCGCGGCATACGCAACCACGTATGCACTGTCTGCAATAAGGGATTCTACGAGGTTTCCAAGCTGAACGCACATATGAGGGTCCATACTGGCGAGCGTCCCTACGAGTGCCAGTACTGCGAGCGCCGCTTCGCGCAGCAGTCGGCGCTCATCTACCATCGCCGCACGCACACGGGCGAGAAGCCCTACTGCTGCAAGCTCTGCTCGGCTCGCTTCACCACCTCCTCCGCCAGGAACAACCACATGATCACTCACACTGGCAACAAGAGGTTCGTGTGTCCAATCTGCCTAAAAGGCTGCACCTCACGCACAGAACTGCGCgtgcattcaagcaagcatacagGAGAGAAGCTGTTCGAGTGCAACCAGTGCGGGCAGCGGTTCAGCTCGGCGTCCTACCTGGCCGTACATCGTCGCTACCACACCGGCGAGAAGAAGTACCAGTGTCTCGTCTGTGGGAAGGGCTACGTAGAGTCGAGTTCATTCAAGAAACACGTGAAGACGCACGCCAAGTCCGAGACTGAGTCGTCCACGTCGGAGACCAGCGCGGACGCGCCGCCCGGCACCGAGCCGCGACCCGCTCTCGACCAGACCGTCACCGTCACCGAGAACCTGCCTGATGCGCAGAACCAAGTTCAAGCACAAGTACAGATCCAAGTGCAAGACACGCAGCAAGTCCAGGTTCAAGTGGAACGTACTCCGCAGCAGAAGATAACGCGGTACAAGTGCGGGCTGTGCGTGAAGACGTACATGTATCTGCACAACTTGAAGAAACACATGCTGGTGCATGAACAGCAACAACAAACACAGCAGCAGCAACAACAAACACAGCAGCAGCAACAACAACAGcaacaacagcagcagcagcagcaacaacaacaacagcagCAGCAACAACAACAACGCCAACAACAAGTACAACAGCAACACCAGCAACAACAAGTACAACAACATCAGCAACAGATGCAGCAACAACATCAAGTGCAACAAGTTCAAGTACAACAACAGCAAGTTCAAGTGCAACAACAAGTGCAGCAGCAGGTGCAACATCACCAGCAGCAGCAACAGATGCAGCAACAAGCAGTGTTACAAGTCGGCAACGTGCAACAGCTCACCGTGCCTATACACGCGCAACATGTGCAACAAGGGATCACTGTGTCTGGAGTACAGAGTCAGCACCCGTACCCGGTGATCTCGTCAGTGCAGTCGCTGCAGCTGCAGCAAACACAACAGGTTAACACgCAACAGCCGCAGCAGCTGCAAGTTCAGACCATACAGATACACCCGCAACATCAACCTATACAAATACATGCAGTGGGCGTGCAGCAAGTGCAGCAGCAACAGCTTCACGTTGCCACCTCCAGCTGCCAGACCATGCTGCCCAATATACTGCAGCTGCAACCGACCACGGTGGCGGTGTCGGGTCTGTCGCAGCAGGAGCTGGGCGGCGTCACGCACCGCATCATCCTGCAGCCGCAGCCCTCGGCCGCGCACCCCGCCGTCTACACCATCCATCACTAA
Protein Sequence
MAAPNKPLKFDKICRACLEIKKDMRPLFDQLTATMLMGISKVQVAVGDGLPPQLCLQCVHQISRCHAFKDMVERNDITLREHAARMAEEAFKREREEKEKLLNLNCTEPYMQYMEVPLASASQILDGFFTATPDPPPAETPDAELKQDFDVEKLDTDLVQMKDKEGLNSDEENYLQLVLFQATSTVSPGRHVCNLCHKEFKHARWLKQHMRSHTNWIKANCKKPPSCVICDRTFKGPGMLKMHMRTHEQRPAKQPTCSVCQRTFPSKTLLYRHRQTHFEQKTHLCSVCDKRFYSGYALRSHMARHRGERPYVCTNCNKSFYNPTDLKVHFRLHTGEKPLKCNECNKTFRRHSTLCQHMKKHRGIRNHVCTVCNKGFYEVSKLNAHMRVHTGERPYECQYCERRFAQQSALIYHRRTHTGEKPYCCKLCSARFTTSSARNNHMITHTGNKRFVCPICLKGCTSRTELRVHSSKHTGEKLFECNQCGQRFSSASYLAVHRRYHTGEKKYQCLVCGKGYVESSSFKKHVKTHAKSETESSTSETSADAPPGTEPRPALDQTVTVTENLPDAQNQVQAQVQIQVQDTQQVQVQVERTPQQKITRYKCGLCVKTYMYLHNLKKHMLVHEQQQQTQQQQQQTQQQQQQQQQQQQQQQQQQQQQQQQQRQQQVQQQHQQQQVQQHQQQMQQQHQVQQVQVQQQQVQVQQQVQQQVQHHQQQQQMQQQAVLQVGNVQQLTVPIHAQHVQQGITVSGVQSQHPYPVISSVQSLQLQQTQQVNTQQPQQLQVQTIQIHPQHQPIQIHAVGVQQVQQQQLHVATSSCQTMLPNILQLQPTTVAVSGLSQQELGGVTHRIILQPQPSAAHPAVYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01094252;
90% Identity
iTF_00906378;
80% Identity
-