Cleu015839.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cerastis leucographa
Gene Symbol
-
Assembly
GCA_963082945.1
Location
OY720364.1:11281048-11291417[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00013 0.014 17.0 0.1 3 23 135 155 134 155 0.97
2 19 1.1e-06 0.00013 23.4 1.2 1 23 161 183 161 183 0.99
3 19 7.1e-06 0.0008 20.9 2.7 1 23 189 211 189 211 0.99
4 19 6.5e-06 0.00074 21.0 2.5 1 23 226 248 226 248 0.98
5 19 0.00019 0.021 16.4 0.6 1 23 263 285 263 285 0.98
6 19 6.5e-05 0.0073 17.9 3.1 1 23 300 322 300 322 0.98
7 19 4.5e-07 5.1e-05 24.7 1.5 1 23 337 359 337 359 0.99
8 19 0.0002 0.023 16.4 2.8 1 23 365 387 365 387 0.98
9 19 0.00023 0.026 16.2 0.0 1 23 466 488 466 488 0.97
10 19 1.4e-05 0.0016 20.0 2.1 1 23 494 516 494 516 0.99
11 19 0.046 5.2 8.9 1.8 1 23 523 545 523 545 0.98
12 19 7.6e-07 8.6e-05 24.0 2.3 1 23 551 573 551 573 0.99
13 19 0.053 6 8.7 1.8 1 23 580 602 580 602 0.98
14 19 3.1e-06 0.00035 22.0 1.5 1 23 608 630 608 630 0.99
15 19 0.00059 0.067 14.9 0.7 1 23 637 659 637 659 0.99
16 19 3.4e-06 0.00039 21.9 1.9 1 23 665 687 665 687 0.98
17 19 0.0025 0.28 12.9 0.3 1 20 693 712 693 715 0.93
18 19 4.1e-05 0.0047 18.5 1.3 2 23 722 743 721 743 0.96
19 19 3.8e-06 0.00043 21.8 1.3 1 23 749 772 749 772 0.97

Sequence Information

Coding Sequence
ATGTTCGAACAGCAGATCAAGGCTGAACCCATGAGTTTCTACACATCTCATCCACACGTACACCCCGGTCCCCCAACAATATTACGGTCAGATTCAAGCCATGCATCCATCATCAACATGAATCAACATCACCAGCAACACCAAGAGGATTCTAAAGACAGCCTCATAGTACAACACCAAGTACAACATCAGCAAGATCTCATGGAACAACATCAACAACAACAGGAAATGCAACAACAAGATGACGAGTTGAGTTTTAAAGGAATGGACGACGATGGAGTTGACATGGATATGGACGGACGACAATGTTCTCAGGGTATGGGAGTGGACATGGGATCAGTTCAAACTAAAATGGAAGTGTCGAATGGAGGTCAGTCGACGCCACGATCTAAACCACAGGCCTGTAAGGTCTGTGGCAAAGTTTTGTCGTCGGCTTCCTCTTACTATGTCCACATGAAGCTTCACTCAGGAAACAAACCTTTTCAGTGCACTGTGTGCGACGCAGCTTTTTGCCGTAAGCCGTACCTAGAAGTGCACATGCGCACACACACAGGGGAACGCCCCTTCCAGTGCGACCTCTGCCTCAAGCGCTTCACGCAGAAATCCAGTCTCAACACGCACAAACGTGTTCACACAGATGAGCACATGCGCGCGTTGATGGTGAAGGACCGGCCCTACAGGTGTGATCTCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAACCGACACAAGAAAATTCACACGGAGGAACACAGACGTGCGCTGCTGGCTAAGGATCGGCCCTACCAATGCGGCGTCTGCTATGTGAGATTCACCCAGAAATCAAGTTTGGGCCGGCACGGAAAAATACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGACGACATGGGAAAATACACACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGCGACATCTGTGACAAGCGGTTCACGCAGAAGTCCAGCCTTGGTACTCATAAACGTATACATACCGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGCGGTAATGCAATCGCCGCAAAAACGCATTCTTGGCGCCCCAGCATCGTATCTTCATGCGGTGCTGGCTTCAAAATTGGGTTTACAAAATTTGGGGGTGAATCGGTCGCCGCGCGCGACGGTCGATGCGGTCGGGATTGGCAGTGGGCGGGCGGCCCAAGGCAGGACCATGCGTCGGCGACGTGCGTTACTCGCTTTTGTGTGTGCACTGGGCGCAGTGCAAGGGCGTCCTTTCGCGTGCGGGCAATGCCCGGCGGCGTTCGCCCGCCGCCCCTACCTGGACATTCACATGCGCACGCATACAGGCGAGCGGCCCTATCAGTGCGACGCGTGTCTGAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGAGGACACACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATACACACGCGCACGCACACCGGCGAGCGGCCGTATCAGTGCGACATCTGCCTGAAGCGCTTCACTCAGAAATCCAGTCTCAACATCCACAAGCGGACGCATTCAGTGCAGGGGCGGCCCTTCCAGTGCCTGCAGTGCCCGGCCGCCTTCACCTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACCGGCGAGCGGCCCTACCAGTGTGACGTATGCCTCAAGAGATTCGCGCAAAAATCTACACTCAATATACACAAACGAACGCACACAGTGCAAGGGCGTCCGTACCAATGCATGGAGTGCCCGGCGGCGTTCACATGCAAGCCGTATCTGGAGATACACATGCGTACGCACACTGGGGAAAGGCCGTTCGAGTGCGATGTCTGTTACAAACGCTTCACGCAGAAATCCACGCTCAACATTCACAAGCGAATTCATACCGGTGAACGTCCTTATGCTTGTGATATTTGTCAGAAACGTTTTGCTGTGAAGAGCTATGTAACGGCGCACAGATGGTCTCACGTGGCCGACAAGCCTTTGAACTGCGACCGCTGCTCCATGTCGTTCACATCCAAGTCTCAGTTCGCGCTGCACATCCGTACGCACTCCACCGGTTCCTGCTACGAGTGCAGCGTCTGCGGACGTTCCTTCGTAAGGGACAGCTATCTAATAagACACCACAACCGTGTCCACCGCGAGAACCACAGCAACGTGTCGGCCAACAGCATCGGCACCATCAACAGTGTTGCGACCAACACCAACAACTCTAATAACTTTGACTCGCCCGGCGTTTGTGACTTAAGTTTCGTTCCAATGGTAAATCGTTACATGACATCTCAGGGGACTCAAGTATCCATGCAGGATACCAGCAAAATGTCTGCGATGTCGCCACAGTCTATTGCGTCTATTTCGTCGCCCCCTCCCTCGCATACCCCTACGCCCCAGCCCCAGATGTCTGGTCAGATGCATCTTGCAGATTGA
Protein Sequence
MFEQQIKAEPMSFYTSHPHVHPGPPTILRSDSSHASIINMNQHHQQHQEDSKDSLIVQHQVQHQQDLMEQHQQQQEMQQQDDELSFKGMDDDGVDMDMDGRQCSQGMGVDMGSVQTKMEVSNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALMVKDRPYRCDLCQMRFTQSSSLNRHKKIHTEEHRRALLAKDRPYQCGVCYVRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTAVMQSPQKRILGAPASYLHAVLASKLGLQNLGVNRSPRATVDAVGIGSGRAAQGRTMRRRRALLAFVCALGAVQGRPFACGQCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMSFTSKSQFALHIRTHSTGSCYECSVCGRSFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNSNNFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTSKMSAMSPQSIASISSPPPSHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00824939;
90% Identity
iTF_01085626;
80% Identity
-