Basic Information

Gene Symbol
Ncor1
Assembly
GCA_963082945.1
Location
OY720365.1:9857870-9888487[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-09 1.7e-05 26.0 0.0 1 43 440 482 440 484 0.97

Sequence Information

Coding Sequence
ATGAGAACTCCGCTAGTACTTCAAACGCAAATCCAAGAGAGGCCCGGGCAGACGGATCACGGGCACGGCGGCGGCGCGCTGGCCTACGGCGGCAAGCCGGCGGCAGGGGGCGTGGTGGCGCCGCCGCAGCCCCGGCCGCCGCCCGCGGCACCCTACGCCCCACAGCCCTACCCTGCAGCACAGCTGCGGTTGCACCAGCCAGGATATGGATCTGCGGCTTTATCATACAGGGACAGCAGCTACGTCCGCGGTGGCGGCGCGGTTGGTTCCGTCGGTGGCGTGGGCGCAGTGGGCGCGGGCGCGGTGGGCGCGGGCGAGTACCGCGGGGGGCGCGTGTCACTGCTCGGCGCGGCTTACCTCcccccgcccgcgcccgccgcgcacCACCCGCCCCCCGCAGACCCTCCGCCTTTTAAGAAGATCAGGCTCACAGCTGAACGGACGCCACTGCCACATCATCAGCCGCTTAGGGTTGATACTAGGGAGCCGGTGAACCAGTACAGCACAGTAGAAGTGCTCTCTCCTAATCCACCATCAGAGCCCACGATGGAGGACCAGAGCTTCAGAACCACTAAGGATGACTTATTACAACAAATATCCAAGGTGGACAGAGAAATGGCGTTATCAGAGTCAACGCTATCAAAGTTAAAGAAGAAACAAGAAGAGTTAGAACAGACCGCCTCAAAGCCTGCTCGGGCGGAGGAGCCAGAAGAAACAGTGCCGAGACACAGAAGTCTGGCACAGTGCGTGTACGCGGAGAATAGGAAAAAGGCTTCATCAGCGCACGCAGTAGTGTCGCACCTTGGACCTCCAGTGCTGTACCCGCTGTACAACCAACCACAAGACACGGAGGTCTACCATGAGAACATCAGACGAAATCGAACGTTTCGGAAGCGGTTGGCGGAACATATACGGAAGCTTAAGCTTGAGTCGGAAAAGCGCGAGGATGCGTTAGCGGAAGCGTACAGCAGACGAGCCGCGGAGTGGTTGAGGCGAGTGGAGCGGATAGAACAGGGACAGAAGAGAAAGGCGAAAGACGCACGGAATCGAGAGTTCTTTGAGAAGGTCTTCCCCGAACTGCGAAAGCAACGCGAAGAAAGAGAGCGGTTCAACAGGCTAGGAGCGCGCGTCAAGTCGGAGGCAGAACTCGAAGAGATCGCTGACGGCCTGCATGAGCAAGAGCATGAAGACAAGAAGATGAGGTCCCTGACCGTGGTTCCTCCACTGTTGAGGGACCCTAGCGACGCCACGCCCATTTATATTGATACAAATAGACGATGTATGGACATGGAATCGGAACACAAAGAGCTGCAACTCCGTAACGTGTGGTCACAGGCAGAACGGGAGCTCTTCCGCGAGAAATACCTACAGCATCCCAAGAACTTCGGCCAGATCGCGTCCTTCCTACCTCGGAAGAGCGTAAGGGACTGCGTCAGATTCTACTACCTGTCCAAGAAGGCTGAGAACTACAAGCAGTTGCTGCGGAAGCCGAGACAAAGGCGGTCCGCACGAAACCCGCCGCGGGCGCAGCCAGAGCCGGAACTGCCGGCTGGAGTTACTACGAGGCTACAGCGAAGCCAAGGTACGACGGCGCGAGGCACGGAGAACAAAGAACCCAGCATGGAGGAGAGTATGCAGCAGGTCGGTGACCAGGTCACCTGTATACCTATCCCGACTGCAGCGCCCGCGCAGCCTCCTAGGTCGGAATTAACACGAACACCGCCCTTACCACCATCGCCGCCACCGGCGTCGtcggcgccgcccgcgccggtCACGTCAACCCCTACGCCGTTGTCGGTGGCGAACAGCCCAGCAGCAGCGCCCACACCGCCAGCCGTCGACGTGCCGCTACCACCGGCCACATCAGCCGATGTTACGCTTACTATCACTCCAGTTTCAACACCAATAAGCGCACCAACGAGCGTGGCGCCGACCTCATCACCCGTCACCTGCATAACGTCGACGGCGGCAGTGGCAGCTGCCACGTTGTCAGCGCCTGCCATGTCGACTGGCAGCGGTAGTAACAGCAACAGCAACAGCAACAGTGCCAGTTGCAGTGGCAGCGGCAGCGCGCCGCCTACGCCACAGCCTGCGCAACCACCTACGCCAACACAGCCACCACCCACGCCAGAAGCTGCAGTGGAATTATCTATTATTTAA
Protein Sequence
MRTPLVLQTQIQERPGQTDHGHGGGALAYGGKPAAGGVVAPPQPRPPPAAPYAPQPYPAAQLRLHQPGYGSAALSYRDSSYVRGGGAVGSVGGVGAVGAGAVGAGEYRGGRVSLLGAAYLPPPAPAAHHPPPADPPPFKKIRLTAERTPLPHHQPLRVDTREPVNQYSTVEVLSPNPPSEPTMEDQSFRTTKDDLLQQISKVDREMALSESTLSKLKKKQEELEQTASKPARAEEPEETVPRHRSLAQCVYAENRKKASSAHAVVSHLGPPVLYPLYNQPQDTEVYHENIRRNRTFRKRLAEHIRKLKLESEKREDALAEAYSRRAAEWLRRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPSDATPIYIDTNRRCMDMESEHKELQLRNVWSQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPPRAQPEPELPAGVTTRLQRSQGTTARGTENKEPSMEESMQQVGDQVTCIPIPTAAPAQPPRSELTRTPPLPPSPPPASSAPPAPVTSTPTPLSVANSPAAAPTPPAVDVPLPPATSADVTLTITPVSTPISAPTSVAPTSSPVTCITSTAAVAAATLSAPAMSTGSGSNSNSNSNSASCSGSGSAPPTPQPAQPPTPTQPPPTPEAAVELSII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00017298;
90% Identity
iTF_00907008;
80% Identity
-