Cleu000176.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- -
- Assembly
- GCA_963082945.1
- Location
- CAUJBK010000001.1:1181589-1183534[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-08 0.00011 23.1 0.0 8 40 21 53 19 58 0.85 2 2 3.3 4.2e+03 -1.2 0.0 21 29 222 230 222 231 0.88
Sequence Information
- Coding Sequence
- ATGAGACACTACAAACGAAAAACGGAACGTGCTTCCCAAAGCCAAGATGTTTACGAATTGGCCTGTGCTGAAGTCTTGGAAAATAAAACCAGTGTACGGAAAGCtgcaaaacattttgatttatgCCATGTATCGCTATATAGATACGTGAAAAAGAAGAAGAGTGACAAATCTTTATCAGTCGGCTATGTCAAACCCAGATTGGTTTTTAAAGAGGAAGAAGAAGCTAAAATATGTGAGTACTTGCTTTCTTGCTCCAACATTTACTTTGGATTGGTTCCTTTGGAAGTCAGAAAGTTAGCATACCAGTGTGCTGTTATGATTAAAGCGAAAAACTTACCTCCGTCATGGCGTGAAAATGAATCAGCGGGACCAGATTGGTTCAAAAATTTTATGGCAAGGAATCCAAGACTGTCTCTGAGGACTCCTGAAGCTACATCTCTAAGCCGCGCAACATCGTTTAATAAAACCAACGTGCAAGACTTTTTTAGGAAGCTTACAGATGTTATGGTGGTGCAAAAAGCAAAAGAAAGTCACGTTATCATGCTATCGTTTCCCCCCCACTGTTCACATAATCTGCAGCCGTTAGATGTTGGAGTTTATGGTCCGTTCAAGAATTATTTAAGCCGAACACAGACAGCGTGGATGCATAACAACCCAGGGAAAGCGATGACAATATATGACATTCCTGGAATCGTTAAGGATTCTTTGCCATTAGCAATGAATCCTTCTAATATAATGAATGGATTTAAAGCCACGGGCATATGGCCTCTAAATGCAGATATTTTTAAAGATTCAGATTTTGCCCCATCTTATGTTACGGATCGGCCAAATCCTGCAAGCAAAGAATCTGAATCAGATATGAACATCACTGCCTCTAGCTTGACAACAAATCTTCCTAATATAGATTCACTCGATAATTGTTCTTTAGATATAAGTGTCAGTGAAATCATAAGTTCCATAGAAAATTGTAACCCAGAAACTTCAAATTTAACAAGAATTGAAGATACTTTATTTACAACAGCTTTACCTGGAGGTCAATCTGACTTTGAGCCGACTCCTGGACCTTCTGGTATTCAAAAGCAAAATGATTTCTCTCCATCTAAAATAAGACCTTTCCCGAAAGCTCCACGACGAAAATTGACTAGCCGCCCTCAACCTTGTGGGGAAACTTATAAAAATTCAAACGAGGAGTGGATACAATGCATCATGTGCAAGATGTGGGCACATGTGAAATGTGCAACAGGAAATAAGATCTCATTTGTGTGTCTCAATTGTGATTCCGATGAAGactga
- Protein Sequence
- MRHYKRKTERASQSQDVYELACAEVLENKTSVRKAAKHFDLCHVSLYRYVKKKKSDKSLSVGYVKPRLVFKEEEEAKICEYLLSCSNIYFGLVPLEVRKLAYQCAVMIKAKNLPPSWRENESAGPDWFKNFMARNPRLSLRTPEATSLSRATSFNKTNVQDFFRKLTDVMVVQKAKESHVIMLSFPPHCSHNLQPLDVGVYGPFKNYLSRTQTAWMHNNPGKAMTIYDIPGIVKDSLPLAMNPSNIMNGFKATGIWPLNADIFKDSDFAPSYVTDRPNPASKESESDMNITASSLTTNLPNIDSLDNCSLDISVSEIISSIENCNPETSNLTRIEDTLFTTALPGGQSDFEPTPGPSGIQKQNDFSPSKIRPFPKAPRRKLTSRPQPCGETYKNSNEEWIQCIMCKMWAHVKCATGNKISFVCLNCDSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -