Cleu023330.1
Basic Information
- Insect
- Cerastis leucographa
- Gene Symbol
- -
- Assembly
- GCA_963082945.1
- Location
- OY720371.1:2653206-2653679[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-09 5.4e-06 27.2 0.0 1 44 21 64 21 65 0.91
Sequence Information
- Coding Sequence
- ATGGTGCCTGTCACTAACggacagaaaaaaaatgaagagcTGTCCCGAAGGTTTGCTTATAGTGAAGAAGCACTGACAAGCGCTCTTTCAGATATACACAACAACATTCGCGGCCTCAGAGAAGCATGCCGGCAGTACGGAGTTCCAAGATCCACTGTACAGGACAGGTTTTCCGGTCGTGTTGCTGACAAAAGAAGAAAAGTTGGCCCAGACCCTATATTTGGTTTTGATGGTGAAGAGAAAATCGTTGATTGGATAATTGAGTTGGCGAAAGCCGGAATTCCGATCAATAAATATGATCTTCTGGATACTGTGGCTGAGCTTGCAAAAGAACTGGGCATAGACCATCTCTTTCCAGATGGTAAATCTGGTAAACGATGGTATCTCAGCTTTCTCAAACGCCATCCAAACATAAGCATCCGAGAGCCAAAAGCTATTAATAAGGCCCGAGAAGCCATCAAGAAAAGAATCTAG
- Protein Sequence
- MVPVTNGQKKNEELSRRFAYSEEALTSALSDIHNNIRGLREACRQYGVPRSTVQDRFSGRVADKRRKVGPDPIFGFDGEEKIVDWIIELAKAGIPINKYDLLDTVAELAKELGIDHLFPDGKSGKRWYLSFLKRHPNISIREPKAINKAREAIKKRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00301105; iTF_00301111; iTF_00301112; iTF_00301113; iTF_00301114;
- 90% Identity
- iTF_00301105;
- 80% Identity
- -