Basic Information

Gene Symbol
kn
Assembly
GCA_963082945.1
Location
OY720358.1:7657578-7669041[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-143 5.3e-139 465.4 0.0 181 387 16 240 7 245 0.98
2 2 1.2e-07 0.001 18.7 6.0 420 502 249 337 241 413 0.60

Sequence Information

Coding Sequence
ATGCGGGAACAGATGTGTGACGCCGCGGGCACCACAAATACGTTCGCGCGATTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAGAATGCCGGGAACCCTAGGGATATGAGAAGGTTTCAGGTGGTAATATCAACACAAGTGATGGTGGACGGTCCTCTCCTAGCGATATCAGACAATATGTTTGTCCACAACAACAGCAAGCATGGCCGGAGGGCGAAACGGCTAGACCCTAGCGAAGGTACAGATGGCGCCACAGACAATACTtCAGGTTTATATCCTCCCCTGCCAGTAGCCACACCATGTATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCCGGGGGGTCGACAGTAATCATAGTAGGAGACAACTTCTTCGACGGACTACAAGTTGTGTTTGGAACCATGTTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTACAGACCCCTCCGCGTCACATACCAGGCGTCGTGGAGGTGACGCTTTCGTACAAGAGCAAGCAATTCTGTAAGGGCGCGCCAGGGagatttgtttatgtttCAGCGTTGAACGAGCCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAAGGAAATTATCCTTAAGCGAGCGGCGGACTTGGCGGAGGCACTGTACTCGATGCCTCGCAATAACCAACTGGGGCTAGGCGCACCGCGTTCACCGCCTGCGAGCATGCCTTTCAACTCTTACACAGGACAACTAGCGGTCAGCGTACAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGTTCGGTATCGCCGCGGTACTGCTCTGCCGCGTCGACACCGCATGCCGCGCCCGCAGCCTACCCGCATCCACAACATTACCCTGCCCCGCCGACCTCACTCTTCAATACCACGTCtaTGTCTCTAGGACCGTACCATCCAGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGACAGCGATATGAAAGCGGCTCAGAATAAAGAGACTAAGCTGAGGAGCGCTTTTGCCGTTGTGAGGCAGAGTCCGCCACGGGTAGCCAATGAGCATCATCAGAATTGGCACCACCTCGCCGTTCAGTGTtag
Protein Sequence
MREQMCDAAGTTNTFARFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSMSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTDSDMKAAQNKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00784987;
90% Identity
iTF_00176893;
80% Identity
-