Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.12 4.6e+02 1.8 0.0 13 25 3 15 2 15 0.92

2 7 0.1 3.8e+02 2.1 0.0 13 25 44 56 41 56 0.91

3 7 0.1 3.8e+02 2.1 0.0 13 25 85 97 82 97 0.91

4 7 0.1 3.8e+02 2.1 0.0 13 25 126 138 123 138 0.91

5 7 0.1 3.8e+02 2.1 0.0 13 25 167 179 164 179 0.91

6 7 0.1 3.8e+02 2.1 0.0 13 25 208 220 205 220 0.91

7 7 0.1 3.8e+02 2.1 0.0 13 25 249 261 246 261 0.91

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.12	4.6e+02	1.8	13	25	3	15	2	15	0.92
2	7	0.1	3.8e+02	2.1	13	25	44	56	41	56	0.91
3	7	0.1	3.8e+02	2.1	13	25	85	97	82	97	0.91
4	7	0.1	3.8e+02	2.1	13	25	126	138	123	138	0.91
5	7	0.1	3.8e+02	2.1	13	25	167	179	164	179	0.91
6	7	0.1	3.8e+02	2.1	13	25	208	220	205	220	0.91
7	7	0.1	3.8e+02	2.1	13	25	249	261	246	261	0.91

Coding Sequence: ATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGTACCGCGTACCTCGCAAGGCTAGGTAGTGTCTCACTCACCATAGTGCGGCGGGCCCGGGCCGGGCTGGTGCGCGCCGAGCCAGCGATGGCGCGCCACGCTGCGCAGGGACAGTCTCTTCTCTGGCTCCACCACCAGCATGTGGCGGATGAGGTGCTCGCAGTCTGGGGGAGGGAGAGGAATTAG
Protein Sequence: MARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLCTAYLARLGSVSLTIVRRARAGLVRAEPAMARHAAQGQSLLWLHHQHVADEVLAVWGRERN

Sequence clustering based on sequence similarity using MMseqs2