Cpis020615.2
Basic Information
- Insect
- Ceramica pisi
- Gene Symbol
- clz9
- Assembly
- GCA_963859965.1
- Location
- OY982539.1:23999805-24002486[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-07 0.00015 22.7 0.0 5 40 2 38 1 41 0.89
Sequence Information
- Coding Sequence
- ATGTTAAAACTTGCATGTGAATCAGTAGAATCGGGTCAAATTTCTTCACGAGATGCCCAACGGCAATTTGGTATCCCAAGACgcacaatattaaataaaataaaaaacaaacattcgAAGTCAGTGGGTCATCCCACTGTTTTATCAGCTGCAGAAGAAAACCAAATTGTACGAGTTTTACAAGCTTCTAGCGATTTTGGCTCCCCGCTTACTAAAGTGGATCTAAAGCTTGTAGTCCATGAATATCTAAAGAAAAATTCTCGAGATCATATGTTTAAGAATCAGATTCCTGGTGATGCATGGGTCCAGGGCTTTTTAGCAAGAAATGCTGATAAATTAACTGTGAGAACCACTCAAAATATTTCAAAGGCTAGAGCTGAAAAGGGACCTCAAGAAATAACCGAATACTTTGACAATTTAAGTACAACATTAAAGGACATACCAGCAGAAAATATAGTCAACTTTGATGAAACCAACCTGTCGGACGATCCAGGTTCTTCAAAGTGCATTTTTCGGAGAGGAGTAAAGTATCCCGAAAGAATAGTCAATTCCACCAAAGGAAATATATCTCTTATGTTTACAGCCACCGCAAGCGGTAAATGTCTCCCCATATATGTTGTTTACAAATCAACAAATATGTACTCAGAATGGGTTAGTGGAGGACTACCAGATACCAGATATAACTGCACCAAATCAGGGTGGTTTGACAGTGCTACGTTTGAGAATTACTTTGAAACCATAATTCTCCCATGGGCGCAAAATACATCAGGCACTAAAGTGATCATTTGTGACAACTTATCTAGTCATTTGAGCGTTAAAGTAGTAGAGTTATGCGAGcaaaataacatcaaatttgTTTTTATCCCTCCAAGATCAACACACATCACCCAGCCGCTAGACGTGGCATTTTTTGGGCCTTTGAAGAAAGCTTGGCGTAAAATTTTGTACCAGTATAAGATCCGTAATCCAAACCAAAcaacattgaacaaaaaacactttccGAAATTGCTTAGAGAATTAATTGAAGCAATTCAAATGGGGGAGACAAAGAACATAAAAAGTGGATTTAAAGCATCAGGAATATTTCCGTTGAATCCCCGAGAAGTTCTAAAGAAGATCCCAGAAATGCAAGAAGAAATATTATCATATGGAATCGATCAAGCATTGGTAGACTATTTAAAGGAAACTAGAGCGCCAAAGCAGATGCTagtcaaaagaaataaaaaaattaattgcgAGCCAGGCAAATCAGTGACGGTTTCCGATTTAAATGTTGATTTTGGCAAAagtaaagcaaaacaaaaatcttCTACAGTGGCAAAAAGACAAAGAAAAACTAAAGGCTCCCTATTTTTAGATGAAGAAACTGGCctttttgtaactaaaaatGATCTAGTTTCAAATGAGGATATTAACGAGAATCAAGAAGGCCGTTTGGATTTGGAAGAATATTTTGCTATCTCTCAGGATCAAGATATTACTCAAAATATCATCAACGAGGATCAAGAGAGCTACTTGGATTGGGAAGGTGATTTTGCTGACTCCCAGCATCAAGATATTTATTCTCCTCGAAGTCTCTCTCAGCTTTGCATCGCTGTAATTACCTCCTGCTTGGATCAATCAGTACATAGCGAAAAAACATCACCGACGTTTGCAGATCTTTCATCCACAAAAGGATCAGTGAAACTGAATCCtatcaaagaaaacaaaataactattcTATCAGATGTTATCATTAAAGCAGGACCTTCAAACGTTTGTGTTTCGAAAGAAGTTTCTAATAAGATTGAAAATATATCTATGGTTGGTACATCTGAAAGGGTAAATATCGAGAAAACATCATTGACGTTTGCAGATCCTTCACACTTAAAGACTTCCACAAAAAGATCAGTGAACAGGGAtcctgtcaaaaaaaaaaaaataactgtactCTCGGATGTCATCATTAAAGCAGGGCCCTCAAATGTTTGCGTTTTGAAAGAAGCTACAAATAAGATTGAAAATAAGCCATTTGTTTCTACATCTCTATATGATATACCAGATTGCCTGCAAATGAAGACAAATCAAAATTTAAGAACAGTAAAGACGGAACATTCTACAAAAGTAAAGAAaactaacagaaaaaataaagttacaaaTGCTTCTAAAAGAAAAAAGTCAGCTAGAGGGCgtgtttcaatgaaaaaaaGGAAGTATACATCTGATAGTGACTGTAGCTCGATTATTGATCAAAATGAAGTTCTTACCGTTGACACAGATGAGTCAGATTACGAAACAGTGGATGATTATCTCATTGCTGAATACTTACGGGAACAAGAGGAAAAAGAGAATTTCGAATTTACAGATATCTCATTTGGACTGCAAAATATTGAATATTTTGTAGACAATGAAAACATGAAAAAGGATGATTGGATTATTGCTCagtttgcaacaaaaaatactttaaagcaTTTTGTAGGTAACGTTTTATCAATCAACGGTAAAATTCCTACAGTTAAGTTTGTGCGAAAGATTAAGGAGTCTAAATGTGAAAAAGGAACCACTTTCACGTACCCAATAGTTGATGATATTTACACTATGGATCACTTAGAAGATGTTATTACAATACTACCCAAGCCAAAGATTACTCGACGTGGTCAAATCGTTTTTGATATCGATTTCAGTAGTTTCAACATTCAGTGA
- Protein Sequence
- MLKLACESVESGQISSRDAQRQFGIPRRTILNKIKNKHSKSVGHPTVLSAAEENQIVRVLQASSDFGSPLTKVDLKLVVHEYLKKNSRDHMFKNQIPGDAWVQGFLARNADKLTVRTTQNISKARAEKGPQEITEYFDNLSTTLKDIPAENIVNFDETNLSDDPGSSKCIFRRGVKYPERIVNSTKGNISLMFTATASGKCLPIYVVYKSTNMYSEWVSGGLPDTRYNCTKSGWFDSATFENYFETIILPWAQNTSGTKVIICDNLSSHLSVKVVELCEQNNIKFVFIPPRSTHITQPLDVAFFGPLKKAWRKILYQYKIRNPNQTTLNKKHFPKLLRELIEAIQMGETKNIKSGFKASGIFPLNPREVLKKIPEMQEEILSYGIDQALVDYLKETRAPKQMLVKRNKKINCEPGKSVTVSDLNVDFGKSKAKQKSSTVAKRQRKTKGSLFLDEETGLFVTKNDLVSNEDINENQEGRLDLEEYFAISQDQDITQNIINEDQESYLDWEGDFADSQHQDIYSPRSLSQLCIAVITSCLDQSVHSEKTSPTFADLSSTKGSVKLNPIKENKITILSDVIIKAGPSNVCVSKEVSNKIENISMVGTSERVNIEKTSLTFADPSHLKTSTKRSVNRDPVKKKKITVLSDVIIKAGPSNVCVLKEATNKIENKPFVSTSLYDIPDCLQMKTNQNLRTVKTEHSTKVKKTNRKNKVTNASKRKKSARGRVSMKKRKYTSDSDCSSIIDQNEVLTVDTDESDYETVDDYLIAEYLREQEEKENFEFTDISFGLQNIEYFVDNENMKKDDWIIAQFATKNTLKHFVGNVLSINGKIPTVKFVRKIKESKCEKGTTFTYPIVDDIYTMDHLEDVITILPKPKITRRGQIVFDIDFSSFNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00300143; iTF_01118236; iTF_01118238; iTF_00300127; iTF_00300128;
- 90% Identity
- iTF_00300127;
- 80% Identity
- -