Cpis002599.1
Basic Information
- Insect
- Ceramica pisi
- Gene Symbol
- jarid2b
- Assembly
- GCA_963859965.1
- Location
- OY982527.1:37133709-37139168[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 7.4e-16 59.6 0.0 17 89 91 160 76 160 0.85
Sequence Information
- Coding Sequence
- ATGTTTGACAAGAGTGCATTTTGTATGGGCCCCAGaatatattgttacgagcttgcggaTCCTGTCGCCTTCTTTGAGAAAATCTATCCTGAAGCGGTGAAATTTGGACTCTGTAAGGTTGTGCCCCCACTGGGCTGGACCCCTCCCTCAGAGGTCCACGGCGACATAAGGTTCGATAGCATGAACCAGTACATCTCGCGGCTGTTCAGCCGCTGGGGAGCGGCCGCAAGGGAGCTCGCTGCTATCAAATTGTGTCTTCAACTACATACGAATATTAATTTGGTGCGACAACCACAATTGGATGGTGTGGAAATAAATTTACCGAAACTATATCACCTAGTACAAAGGCTCGGCGGTCTGGAAACagttattaacaaaaaacgATGGGGCAAGGTCGCAGATGATTTGAAAATTGCTAATAATGGGGTTTCTGAGAAAAGATTGGAAACCATTTACATGAAGTATTTGCTACCATACGACGCGCTTTCACATCAGGAGCGCCAGGTGATTATGCGGAAAGTAGAGTTGTCgtggaacaaaaaaaatcaaaagctttTGGACCGCGCCATGAATCCTTTATATCGACAGCAGCGAATGCTCGGCTTGTTGGAATCCTCGGACGAAGAGACAGAAGATGAAAATACTAAGGCTGCTCTCAAACAGGCAGAAGACTGCATCGTCAAAGGTCAAGTCATGGGACACAGGCGATTCAAAAAGCGCTCGCCGTTGACAGTAATGGCCTCGCCATCATCGTTTTCGAAGAAGTACGGACCAATGACGCCGCCAGACCGAAATCCGCATCAAACAGTAACTTTTTGTGGATACATTACCACCTGGTGA
- Protein Sequence
- MFDKSAFCMGPRIYCYELADPVAFFEKIYPEAVKFGLCKVVPPLGWTPPSEVHGDIRFDSMNQYISRLFSRWGAAARELAAIKLCLQLHTNINLVRQPQLDGVEINLPKLYHLVQRLGGLETVINKKRWGKVADDLKIANNGVSEKRLETIYMKYLLPYDALSHQERQVIMRKVELSWNKKNQKLLDRAMNPLYRQQRMLGLLESSDEETEDENTKAALKQAEDCIVKGQVMGHRRFKKRSPLTVMASPSSFSKKYGPMTPPDRNPHQTVTFCGYITTW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -