Cdis011508.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- nfxl1
- Assembly
- GCA_963576895.1
- Location
- OY756368.1:18452304-18461398[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.91 1.1e+04 -3.0 1.3 14 19 167 172 167 172 0.84 2 18 0.35 4.2e+03 -1.7 0.2 4 10 203 209 203 209 0.93 3 18 2.9e-08 0.00034 21.0 16.6 1 19 217 234 217 234 0.99 4 18 4.4e-09 5.2e-05 23.6 15.0 1 18 270 287 270 288 0.98 5 18 1.4 1.6e+04 -3.6 1.0 6 10 313 317 312 317 0.88 6 18 5.5e-08 0.00065 20.1 11.4 1 19 323 341 323 341 0.98 7 18 1.6 1.9e+04 -3.8 0.6 5 10 365 370 365 372 0.73 8 18 0.0085 1e+02 3.5 14.7 3 18 378 393 376 394 0.90 9 18 5.2e-05 0.61 10.6 13.9 1 18 428 445 428 446 0.98 10 18 2.3e-09 2.7e-05 24.5 14.2 1 19 455 473 455 473 0.97 11 18 0.017 2e+02 2.5 7.5 9 19 521 531 512 531 0.86 12 18 0.0067 79 3.8 7.6 3 11 541 549 540 550 0.90 13 18 0.6 7.1e+03 -2.4 5.0 14 18 578 582 578 583 0.91 14 18 0.049 5.8e+02 1.0 6.0 1 12 619 630 613 630 0.82 15 18 0.0026 31 5.1 16.5 3 19 659 675 658 675 0.94 16 18 0.64 7.6e+03 -2.5 1.0 8 13 680 685 679 686 0.78 17 18 5.4e-07 0.0064 16.9 11.6 1 17 720 738 720 740 0.86 18 18 2 2.4e+04 -4.2 1.3 6 10 768 772 767 772 0.85
Sequence Information
- Coding Sequence
- ATGAAGCAAAGACCTGGTGGTTCTAATCAAAACAATGCAAGTAAGTCTGCTACTTCAAGTGGAGATGGGAAAAAGCAGGAAGACAAAGTGAATGTCAGTAATTCGTATACAAGATTTAATGAAGCCAGTGCCAAACTACAAGCGTCTGTGCAGCGACACATTAAAGATTATGAGTCGTCTGAGGAAGAGGAGGAATTGGAAGATACAAAGATATttgaATCTATCATCGGCAGTTACAAATCTGTCAGTAACAAAAATCTAGATTTGGGTCGAACCAAGGATTATTTGGAGCAGTCCTTCCAATCCGGCGGAGTTGTTTGTCTCATCTGCATTGAGTCAATCAAGCGGCAACAAGCGATATGGAACTGCGTATCTTGCTACTCTGCGTTTCACATGAACTGTGTTCAGAAGTGGGGACGAGACTCCATAAGCATTCAGAGGATGCAGAGTGAAGCGTATCCCATGAGAGACAATACGGCAAACAAGAACGCCTGCTGGAATTGTCCAAAGTGTCGTCAGTCGTATTCAgagGTTGAAATTCCCAGCAGGTATTTGTGTTTCTGTGAGAAATCGGTTAATCCACCGTACCATCCGTGGACACTTCCTCATTCCTGTGGCGATATTTGTGACAAACTGCTGCCACAAAAATGTGGCCACCGATGCTTACTACTGTGTCATCCAGGACCCTGTCCACCATGTCCGAAGATGGTGAGCATGCCTTGCAACTGCGCCCAGAGTCCCCCCAAACCCATGAGGTGTGGCTCCCTGAAGTGGTGTTGCAGTACGACGTGCAACAAGGTGCTCGAGTGCGGGAAACACAGGTGCGAGCAGAAGTGCCACAATGGGGAGTGCAGTCCGTGTGACAAGTTCAAGGAGCAGAGATGCCGCTGCAGTAATAAAGTTAAAGTCATCCCGTGTGCGTCAGAAGATTGGCAGTGCGATAAAGTTTGCAGTAAAAAGATGTCGTGTGGATATCACGTGTGCCAAAAAATATGCCATTCGGGAAGCTGTGGTCTCTGCCCTTCTACCGGATATCAGAAGTGTCCGTGTGGCTCCGTGGTCCAAGAGGTAACGTGTCCAAATGAAGTCGCTACCTGTGGAAGCACTTGCAATAAGGTCCTCCCTTGTGACTTGCATCAATGTCCACACAAATGTCATAAAGACAATTGTCCTCAGtgtttggTGTTGGTGGATAAGAAATGTCGTTGCGGACTGCACATTAAGCAGATGCCTTGCAGCAAGCAATACACGTGTGATACTAAATGTAAGAATATGAAATCATGTGGACGACATCCGTGCAACAAGAAATGTTGCGATAACGATTGCATGCCTTGCGACAAAATATGCGGAAAGGTGTTGCAATGCGGTAAACACAAGTGTGCATCAACGTGCCACCAGGGTCCGTGCTATCCGTGTACATTGACGGCTAAGATTGCCTGCCGTTGCGGACGTACCAACATATCCGTTCCTTGCGGGAGACAGAAGAGGACCAAGCCACCAAAGTGCACTCTTAATTGCAGAATTCCAGCACCTTGTGGGCACACCAAggagaatgcacacagatgtcATTTTGGGAGCTGCCCCGCTTGCAAGCAGATTTGCAAAAAAGTGCTTCAGTGTAAGCACACGTGCAAATCCATTTGCCACAACTACGTGCCTGTTTTAATCCCCGGAGCCAAAGCGGACACACCCTGTGATCAGCAGCAGGATGTTGTGGAACTGAGAGCCTTACCCTGCCCGCCCTGTATGGAGCCAGTCAAAGTCAACTGCTTGGGAATGCACGAGGTGACGTCTTATCCGTGTCACTTGGCTAAGATTTCCTCTTGTGGAAGACGCTGTGGAAGGCTCTTGAAATGCCAGAATCACGCTTGCTCCTTGGAATGCCATCCTGTACCCGATGATACAACAACAGAGGCGACCCCACTATGCGAAACGTGCTTGAAGAACTGTTCCCTTCCAAAGCCAGCGGGATGCAATCATCCGTGCAACAAGCAATGCCATCCAGCTCCATGTGATCCGTGCAAACAGTTCTTGAAACGCAAATGCCACTGCGGGCTGACGGAATTGTATTTGCAATGTTTCGAATTCAATAACACGAATGatgaagagaaaaataaaaaccttTCCTGCAAGGAACAATGCAGTCGTTcgTTGGAGTGCGGTCACAGGTGCAGATCCACATGTCACCCTGGGGAATGTCCCGTTCTTGAAGTGTGCACCAGAAAGACAAAAGTTTTCTGCGAATGTCGGAGAATCAAGAAAGAGATTCAATGCGATCTGGCTAAAGAAACGGTCATACAGTGTGACGAGACGTGCTTGAAGAAAATGGAAGAAGAGAAATCTGCCAAACTCCAAGAGGAGGAACGTTTGAAGCTTCAAGAGGAACGGAAGAACCAAAGAGAACTGGAAGAGTATCAGAAAAAATTCGGGCAGAAGAAACACAAGCAACGGAAGATTGTCGAAGACGAAGCTGAACGTAGCTTCATTACGAAATATTGGATGTCTTTGTCAGTTTCTCTGTTTGTCGTGTTGGTTGCAATTATTTTAGTTGCATTTGTATGGGATTGA
- Protein Sequence
- MKQRPGGSNQNNASKSATSSGDGKKQEDKVNVSNSYTRFNEASAKLQASVQRHIKDYESSEEEEELEDTKIFESIIGSYKSVSNKNLDLGRTKDYLEQSFQSGGVVCLICIESIKRQQAIWNCVSCYSAFHMNCVQKWGRDSISIQRMQSEAYPMRDNTANKNACWNCPKCRQSYSEVEIPSRYLCFCEKSVNPPYHPWTLPHSCGDICDKLLPQKCGHRCLLLCHPGPCPPCPKMVSMPCNCAQSPPKPMRCGSLKWCCSTTCNKVLECGKHRCEQKCHNGECSPCDKFKEQRCRCSNKVKVIPCASEDWQCDKVCSKKMSCGYHVCQKICHSGSCGLCPSTGYQKCPCGSVVQEVTCPNEVATCGSTCNKVLPCDLHQCPHKCHKDNCPQCLVLVDKKCRCGLHIKQMPCSKQYTCDTKCKNMKSCGRHPCNKKCCDNDCMPCDKICGKVLQCGKHKCASTCHQGPCYPCTLTAKIACRCGRTNISVPCGRQKRTKPPKCTLNCRIPAPCGHTKENAHRCHFGSCPACKQICKKVLQCKHTCKSICHNYVPVLIPGAKADTPCDQQQDVVELRALPCPPCMEPVKVNCLGMHEVTSYPCHLAKISSCGRRCGRLLKCQNHACSLECHPVPDDTTTEATPLCETCLKNCSLPKPAGCNHPCNKQCHPAPCDPCKQFLKRKCHCGLTELYLQCFEFNNTNDEEKNKNLSCKEQCSRSLECGHRCRSTCHPGECPVLEVCTRKTKVFCECRRIKKEIQCDLAKETVIQCDETCLKKMEEEKSAKLQEEERLKLQEERKNQRELEEYQKKFGQKKHKQRKIVEDEAERSFITKYWMSLSVSLFVVLVAIILVAFVWD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00180111;
- 90% Identity
- -
- 80% Identity
- -