Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756366.1:1870022-1877418[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.037 1.7 9.7 4.8 1 23 271 294 271 294 0.98

2 13 0.0044 0.2 12.6 0.2 2 23 305 327 304 327 0.94

3 13 0.00015 0.0069 17.2 2.6 2 23 342 364 341 364 0.97

4 13 0.027 1.2 10.1 1.1 1 23 424 447 424 447 0.96

5 13 0.61 27 5.8 1.1 1 23 453 476 453 476 0.96

6 13 7.6 3.4e+02 2.4 0.3 3 21 485 505 484 506 0.89

7 13 2.7e-05 0.0012 19.6 1.4 2 23 599 621 598 621 0.95

8 13 0.012 0.54 11.2 1.2 1 23 659 681 659 681 0.95

9 13 0.00079 0.036 14.9 0.0 2 23 718 739 717 739 0.95

10 13 0.0016 0.072 14.0 1.7 1 23 745 768 745 768 0.96

11 13 0.0071 0.32 11.9 6.9 3 23 776 797 774 798 0.94

12 13 0.026 1.2 10.2 3.8 1 20 803 822 803 825 0.94

13 13 0.042 1.9 9.5 4.7 1 23 831 854 831 854 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.037	1.7	9.7	4.8	1	23	271	294	271	294	0.98
2	13	0.0044	0.2	12.6	0.2	2	23	305	327	304	327	0.94
3	13	0.00015	0.0069	17.2	2.6	2	23	342	364	341	364	0.97
4	13	0.027	1.2	10.1	1.1	1	23	424	447	424	447	0.96
5	13	0.61	27	5.8	1.1	1	23	453	476	453	476	0.96
6	13	7.6	3.4e+02	2.4	0.3	3	21	485	505	484	506	0.89
7	13	2.7e-05	0.0012	19.6	1.4	2	23	599	621	598	621	0.95
8	13	0.012	0.54	11.2	1.2	1	23	659	681	659	681	0.95
9	13	0.00079	0.036	14.9	0.0	2	23	718	739	717	739	0.95
10	13	0.0016	0.072	14.0	1.7	1	23	745	768	745	768	0.96
11	13	0.0071	0.32	11.9	6.9	3	23	776	797	774	798	0.94
12	13	0.026	1.2	10.2	3.8	1	20	803	822	803	825	0.94
13	13	0.042	1.9	9.5	4.7	1	23	831	854	831	854	0.98

Sequence Information

Coding Sequence: ATGGAGGAAAGGTCTAATGTCGACTTGGATGAACctaaattaataaaagtaaGCGAATTGTGCAGAAcatgcttgtgtcgtgaagatgTGACTTCTAATATAAATGGATCAGAGTTGGTGTTTGGAGAAGTTGTCAAGTTGACAGATATGCTCAACATATTTAAAGATATCAAGACATCTGGGAAGGACAATTTACCTCCAAAAATATGTTCGAAATGTTTGAGTCAATTAAAGAGTGCCTTCAGTTTCTGTAAGAGATCTCTGAGATCTCAGACTGTACTCACGAGTATAATAAACAAAACGGAAAAATCGAAAGCAGctaaaaatgttgaaaaaaaactcaatgaTTCTGCTGGCGAATTCTCCTCAAACAAATCAACTACTGATGTCTCCAAAACTGGGAATGATGTTAACAAAGTTAAGAGAAAATCGGAAAATAATACGGAAAGTAAAAATAAAGTGTTGAAACAATctgataattttgttttaaaaggtTTTAATGTACCTCAGCATAATATACAGAAGGTTGTTAAACTGATGCCAACAAATTTTGTACAAATTCCAAATAAACAAGATGTCTTTGTATTGAATGGTAACATGTTAACACAAGGTGTCATCATCAATAACCCACAACAGATCAATAATAATGTTACTAAATCAGAAACATCCGATAAAGACAAAAACGGAAAACAACCAACTCCGATTTTATACAAcatattacaaaacaataaaaaccaaCTGAGACCAATCGGACCAAAGGTTAAAAAAGAGAAGAATTTGAGTATAACAAAACCTAAGAAACATACGACGTACAAATGTTCAAAGTGCTGCAGAATTTTCGACACGAAAGAATCGTTTATGACGCATTTGAATACGATGCACGTCGACAAAATCAACACACCTTTACCGAAGACGTGTAGTGTTTGTAATATTTCGTTCGACAGCGCCAACGAGTTAAAGGAACACAACATGTCGATACATTTCAATTGTTTGCCGCGAGCGAGTAAAACGAGAAGTAAGATAACGTGTTCGGTTTGTAAAAAAGATTATAGCAATCATTATCAGTTGAGACAACATTTGAAAACCGTACACGAGACAGAATATAATAACACACTTTGTAGTAAGTGTGGCGGATATTTTTCCAATTTAAAAACGCACGTTACGAAATGCAAAGCGACTGAAGAGAGTTTGTCGTGTGATATTTGCACGGAAGCAAACTTTACTAGTGTTGAATGTTTCGGTGAACACAACATAGAGAAACATGAGTTACATATTTGTTTCTTTTGTAATAAAGGATTTCTTCGAGAAGATGATTTAGCTTCTCACATTAAGAAGATTCACAGTTCTAGAAAAGTATTCCACTGTGTGTATTGTCCGCTTAACTTCTTAAACAGATGGGTTCTGATAAAACATCTGAAAGTGAAACACAACATAGGTCCCAGGAATATGCTGTGTGGCATGTGTGACAATAATACGTCGTACACTGGAAATAAAGATCTGCTCCAACACATGCAACATGAATGCAGCAACACAATGCATCAGGAGGGAGGAAGGtTAGTCAAGGTGGAACACTATGAAATAGACATTGATGACAAAAATAGTATAGACTTTCACAAACGTTTGGAGGAATCCAACCAAAAACAATCTTTATACAACGGCAAAAGCAATGAAAATAATTCTGCAGAGGCAGTAGAGAAGGGTGAACAGGAGGTCAAGATGATTAAGAGTGAAGATAAAATGGATCCCAATACACGACTTGAAAATCAAATTGGGAATGCAGATACTATTAGAATTACATGCAAAATATGTTGGGAGGTATTCAGCACTAAACATGACTATAGGAAACATATGACCGTGTTACATGGAATTAGGTTTAAAAAGAGAAGCATAGCCTCCTCGAGTATCAGGTCGGATAAATTAATGATTGGGAAGAAAGTAGAAGGAGAATCTATGAAGAGAGACACTGAGGGGGCCTACCTGTGTGAAATATGCTCCAAGAGATTCCTGAGGTTGGTCAACCTGGAGAAACACTTCAGTCGCCACATGATGAGTTCGCTGCACTGTGTGAGGTGCGGACACAATGCGGAGAATGCCTTACAGATGGAGGAACACCTTAAAGTCTGCAGGTCAGCCCAGGCGGCAGAGAAGCTCATTTGTCCGATCTGCGGGAAGAAATTAACTACGGCTGCTGGACTCAAgTACCACGTCCAGGCACACACGGGTGTTAGAAAGTTTGCGTGTCCGTCTTGCGGTCGTCGCTTCCTCACTTGCACCAACATGAGAAAACATATCCGTATTGTACATTCCGGAGTGCGTCCTCATCTCTGCAACTTGTGTGGTAGACGGTTCCCTTCCACGGATCATCTGGCTAAGCATGTTCGTCACACGCATCATAATAAAagGGAATACGTTTGCAAAGAATGCAACAAGAAGTTCCTCCAGAGATGTCACTTGGCTCAGCACATGTGGGTCCATACTGGCATCAAACCTTACTCCTGTCCTCATTGTACAAACACATACTCCGCTGTCTGCTCTCTCACAAAACACCTCCGTCGTAATCACTGGGAATTAGAAAATCAGAAACACATAGAAGAAGAAAAATTCTACGAGAATCTCGAGAACGAAGGACAATATTCACCTAGTGACGGGAATCAAGTGACAATTCCAAATGACGATCACGATGAAACCTCACACAATCAACAGAAATCTGACAATAAAGACACAGTGATAGAAATCATAGAATATGAAAAACCGAAAACGTATTTATACAAAACGAGACAAGTGTTACAGTATTCCAATTCAGATGATCGATACGAGAATTCTGTGGTTGAAGGTACAAACGAAGAGACCGATGAAATGGTCGAAACTTCCAGTGAACGATGTTACACGTTACATAATGATGAGAATAGCGATGTCACGTACTGTATCGAGTCCGTACAGGAACAGCAAGAAGTGGAAGTCAACGGTGATAGTGAAGGGGATGAGGGGGTAGACGCGGAAGTGCAGGATCGAGAGGAAGTGGATGAGGAGGGGGACGAATCTGTAGACATTTCCAATGAGAATGATATCGTCATAGATGGAATATGTGCCGACGTTTTAGGTGAAGAGATTAACGTTGTGATCGTGAGTGAGGACGATATTATGGTTAGTGGGAACGAATATGGTGGACAAATCATGTGGTAA
Protein Sequence: MEERSNVDLDEPKLIKVSELCRTCLCREDVTSNINGSELVFGEVVKLTDMLNIFKDIKTSGKDNLPPKICSKCLSQLKSAFSFCKRSLRSQTVLTSIINKTEKSKAAKNVEKKLNDSAGEFSSNKSTTDVSKTGNDVNKVKRKSENNTESKNKVLKQSDNFVLKGFNVPQHNIQKVVKLMPTNFVQIPNKQDVFVLNGNMLTQGVIINNPQQINNNVTKSETSDKDKNGKQPTPILYNILQNNKNQLRPIGPKVKKEKNLSITKPKKHTTYKCSKCCRIFDTKESFMTHLNTMHVDKINTPLPKTCSVCNISFDSANELKEHNMSIHFNCLPRASKTRSKITCSVCKKDYSNHYQLRQHLKTVHETEYNNTLCSKCGGYFSNLKTHVTKCKATEESLSCDICTEANFTSVECFGEHNIEKHELHICFFCNKGFLREDDLASHIKKIHSSRKVFHCVYCPLNFLNRWVLIKHLKVKHNIGPRNMLCGMCDNNTSYTGNKDLLQHMQHECSNTMHQEGGRLVKVEHYEIDIDDKNSIDFHKRLEESNQKQSLYNGKSNENNSAEAVEKGEQEVKMIKSEDKMDPNTRLENQIGNADTIRITCKICWEVFSTKHDYRKHMTVLHGIRFKKRSIASSSIRSDKLMIGKKVEGESMKRDTEGAYLCEICSKRFLRLVNLEKHFSRHMMSSLHCVRCGHNAENALQMEEHLKVCRSAQAAEKLICPICGKKLTTAAGLKYHVQAHTGVRKFACPSCGRRFLTCTNMRKHIRIVHSGVRPHLCNLCGRRFPSTDHLAKHVRHTHHNKREYVCKECNKKFLQRCHLAQHMWVHTGIKPYSCPHCTNTYSAVCSLTKHLRRNHWELENQKHIEEEKFYENLENEGQYSPSDGNQVTIPNDDHDETSHNQQKSDNKDTVIEIIEYEKPKTYLYKTRQVLQYSNSDDRYENSVVEGTNEETDEMVETSSERCYTLHNDENSDVTYCIESVQEQQEVEVNGDSEGDEGVDAEVQDREEVDEEGDESVDISNENDIVIDGICADVLGEEINVVIVSEDDIMVSGNEYGGQIMW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -