Cdis003841.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceraclea dissimilis
Gene Symbol
RTase
Assembly
GCA_963576895.1
Location
OY756361.1:599920-616159[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.024 1.1 10.2 0.3 1 23 300 323 300 323 0.96
2 17 3.9 1.7e+02 3.3 2.5 1 16 533 548 533 554 0.85
3 17 1.1 49 5.1 5.6 1 23 604 627 604 627 0.95
4 17 1.5 65 4.7 0.3 2 23 637 660 636 660 0.91
5 17 2.2 98 4.1 0.1 1 20 666 687 666 688 0.94
6 17 0.031 1.4 9.9 1.7 1 23 696 718 696 718 0.95
7 17 0.0057 0.26 12.2 4.1 1 23 724 746 724 746 0.98
8 17 2.3 1e+02 4.0 0.1 3 21 758 776 756 780 0.88
9 17 0.11 5.2 8.1 0.4 1 23 893 915 893 915 0.96
10 17 0.81 36 5.5 5.6 1 23 922 944 922 944 0.96
11 17 0.034 1.5 9.8 2.2 1 23 965 988 965 988 0.94
12 17 0.99 45 5.2 0.1 1 23 995 1018 995 1018 0.97
13 17 2.7e-05 0.0012 19.5 0.5 2 23 1892 1914 1891 1914 0.97
14 17 0.00026 0.012 16.4 2.2 1 23 1920 1942 1920 1942 0.99
15 17 0.00018 0.008 17.0 2.0 1 23 1948 1970 1948 1970 0.98
16 17 7.5e-06 0.00034 21.3 0.6 1 23 1976 1998 1976 1998 0.99
17 17 0.00042 0.019 15.8 0.3 2 23 2006 2028 2005 2028 0.95

Sequence Information

Coding Sequence
ATGTCTCTGGTATTCAACCTGGAATCGGAGAATGGACAAACAATACCTGTACCAGTCCATTTGAATGATACATTCCAAACCTTCCTGTCCAGGGctagtaaaGTACTAGAAAAAGATGTAAATGTTTCGTCCATAGTCGGAAACAAGGACGTGTCTTTGACCGACAATATTTATCAGTTCATGCTACGAGAAGTATTGAACAATAATTCGGGGAAACCCTCCGACATCGCTCACGAGATCGTTCATATCCCAGACTACAACGCACTGATGGAGAAATGCATATTGGAGAGCGGCGATGGACGTAAATATGACGTCAAAAAGCAGGCACCGaagattttaaatttagaatattACAACAAACGAGACACGCCGAAAACAAAAGACAGTAAAGAAAAGAACACTACAAAttcaaataacaataaatgcTGCTTCTGCGGAGTTTACATCAGTTCCAGCGTATTCATTTCGTACATTTTCGACGAAAACGATCAGAAAGAGATGCGAAAGAGTAAACATCGTCGAAATAGAGGCGCCGCTAAAGTCGTGTGCGATCATTGTCTCGGAAACGATTTCATTAAATACGACGAAATACCAAAGAGTTTCGATGACGACACGTATTTGATTATAAGAAACAAtgtgcaatatttttataagacaAAGTCCCCAGAGAAGCATAGAAGTGTAAAGATTTTGAATAGTTTGAATAGAAACGTCGATAACGTTGACGAGAAATTAGACCTAAAAAGAAATAGTAAGGGTTCGTATGAAATTACGAAACGAAAGTTTGTCTTACAGCAAACGGTTTTCTACACTTGCAGgttatgtaAAGCGGTGGTGGACACTCTCCCCATATCGCATTGCTTGGACCACGTGAGCTCCACATCCGAGGGTCTTGTATTCCCGTGCGTGCTCTGCGAATATGgtTATACGTCGTACAAACAGCTCGCAGATCACATGAGTTCCAGACACTCAAGTCATCAAACGTCTGAGACTGTACTCCCCGATTTACCCTCTGAGAAGAACGATAAAGTATTGAAGCTTCTGAAAGAGCTGTTGAAGAAACAGCAGGACGAAACGAGAGACGAGGAGTGGTTGGATGAAGATACGGGGATTATGAGAAAGACTGTGACGGTTTGTGAAAATGtaattgTACCTAGAGTGGACACATCTCCTTCAAAGGAATCGGAATCGGACTCAGAATCTGGCGTGTGGATAATACAAGCTGATGACGGTGACGCCAATAACGGTGACGATAACGGTGTCATTGATCTTGATAATGATGTCGTTGATCTTGATAATGATGTCATTGATCTTGATAATGATGACAATGATATTGATAATGATGTAATCAATGttgataataatgtaaatgaTATTGATAATGGAGTCAACGATGTTGATAATGAAGTTATTGATCTTGATAATGACGTCAATGATAGTGATAATGCCGTGAATGGTGTTGATAAAGTCAGTGATATTGATAATGCAGTCAACGATATTGATAATGGCGCCATAAATGTTGATAATGGTGTCATAAATGTTGATAATGATGTCGTTGACAATGATAACAATGCTGATGAGGATGATACTATATACTACCAGTGTGACACTTGCggcgaAGAATTTGATTCAATGGAGAGTTTCAACTGTCACGGTTGCGTCACGCAATATCTGAATTCGACGTCTGTCTTCATACTCGAATATCCTCAGGTCGAGGAAGAGGTCAAGGCCAGAGTGATTGCCGTTAGTGATGGGCTGGAGAAAGAGACGGATGTAAAGGAGAGTGAGAGGACAGAGGAAGTCGGGCAACACAAATGTCCATCGTGTACGAAGTCATTCCATACAAAGATACGTCTTCAGTTTCACATACGTTATATCCACAGCGCCGGCTCAGATCCCGCGTCCTTACGCTGTTCCATTTGTCCCGATTTGGCGTTCAGCAGCGAGAGCGCCCTCTACGACCACATACACTTCACGCATCCCAGGAGCAAGAGGTATACTTGCCCCGTAGAAGGCTGCAACAGGCAGTTTCATATCAAAGGCGTTTTGAACAACCATCTGGGATGTCACACCGGAGAACGAACTCATGCATGTGATGTTTGCGAGAAACAGTTCTTTGACAGACAAACACTCAACGAACACAAGGTCACACATCTTAAGgtgAAACCCTTCCAGTGTCACATCTGTAACAAGTATTTGAACAGAAAGTCCCGACTGCGCATGCACCTACTGAACCACCAGTCCCACCCTGCGTCCTGCCCAGTCCTGGCCTGCAAGAAATGCAGTGCCACATTTCCACATGCCAATGCTGCTGAGGAGCATTTAAACGAATTGGGTCATTGCACAAGTAAATTATGTTGGGATACGTCGGGATTGCAAGAAGACGACGTAACCGAGGAATCTGTGGATGATCCGGATGTCGTGGAGTCGTCACTCAATGATTCTGGAATAGATCTGAAGTCGGGCGCAGATCTCAATACTGATGTAAAACAAGAACCTTGTACACTGTTTGAAGATGTTAAAATGGAGGGAGAAAACACTGGTGTCGATCGGAGTAGTAAGAACGATGAAGAGAGCGTGGAAACTAATGGAAGTAATAATGGATGGAGCGATATCTTGGCTGGGCTGAGTGAGGACGCTCGGAAAAGCATCACGCTCGTGGAGGTCGACAAAGTCTTCAGATGCGAATTCTGCGAGAAAATTTATTGGAGGCAAGAAGCCCTCAACATCCACAGAAGCGAACACGAAGGAATAGTCAATCCGTACGTTTGTCACATTTGCGGTGCGCAGTTTTCTACGTATTCCCGTTGCACGACGCACAAGACCACACACGGATTATACAAAGTCGAACAAATGGTCCCGCACGAAGACGCGTTCCCCGTCATTAAGCATTTCCTGTGTGAAGTTTGCAACAAATCGTACCTGCATTGGACCTACTTGCAAGTTCATAGGAGATTGAAACACTCGGACAACGTACACATGTACAAGTGTTTGACTTGCGGAGATGAGTTCCCGAACAGTTGGGGTGTGGCCTATCACAGGAAGAAGATTCACGGACAGAGCAGTGGGTCCGCCCCCGCTGACGAAGTTCCGGATACGAACGTTGAAAGATTGTGGTATAATTGTCTCAACGAAAGCGCAACTGTTTTTACACAAGAGAGCTACACATCCGAAACCACCTTCGCCGCCGAAAGCAggtcaataatttatttatcttcacCCCCAATTGTGCTAGATGATTTCCCCCACTCACAACATCGTCCCGTAATAATTAAGTACGGCATTCGTGTCCCCCTGACGACCACAGTACCCCTCCCAAGGTGGAATTTTAATAAGGCTAATTGGGAGTCATTTTCAAAAGACCTAGATAATATTGTGCAGTATATACCATGCCAAACCGACTGTTATGATAGGTTTGCGGGGGCAATTATATCAACTGCAAAGAAGCACATACCACGAGGGTTCCGTAAGGAATATATACCGGCATGGAACACAACATGTGAACAGCTGTATAAAAGATACAAGGAGACTCGTGAGGAAACTGTTGCCGAAGAGCTTCTGCAGGCCCTGAACCAAGGACGCCGAGAGAGGTGGAACGAGACAGTCAAAGATATGGATTTCCGCCATTCCAGTCGGAAGGCTTGGTGCATACTTCGGAAACTGGGAGCTGCTCCACCTAAACTCCCAAGTGCATCATCCACCAAACCTATAACAGCGGATGACATTGTTAAACACATGGTGTCTGTTTCAAAGATCTCTGTCGGTAAGGAGCGAGTTAGGGAGGTCAATTGTGACTTAAAGAAACTCAAATCCAGACTCTCAGATAACTCCACCTTCTCTGAAGACTTCTCACTGACGGAGTTGAATTCAGCAATGAGAAACACAAAATGCGGGAAAGCAGCCGGCCTGGATGAAATCTATCCAGAGTTCATTAGAAATATGGGCTTGCGCGCAAGAGAATGGCTGGTACAGTTCATGAACGAGACACTGAAAAGAGGTAAACTTCCTGGAATCTGGAAACACTCAAAGGTCATCGCCATTCTTAAGCCGGGCAAGGATGGAACATGCTCCAGCCACTACCGACCTATCTCCTTACTGTGCATTCCTTACAAACTCCTGGAGAGACTCATACTGCAGCGTATTTCCACCTCAATAGATGCAGTGATTCCTATTGAACAAGCAGGCTTCCGAGCTGGTAGAGACTGCTGCGAGCAGGTGCTCGCTTTGACTAGTAGTATTGAAGCAGGCTTCCAGAAAGGACTAAAGTTTTCTGCAGCCTTTGTGGACCTATCAGTGGCCTATGACACCGTGTGGCGTAGGGGCCTTATGGTTAAACTTGCTGAAACCATACCATGTAGAAGAATTCTGAATCTCTTGGATAACATGCTGGCGTGCAGATACATCAGGGTCTCTCTGGGGGGAAAAATGAGCCGCACCAAGGTTCTTAATAACGGCCTGCCACAGGGTTCAGTCCTGGCTCCTCTGTTATTCAATCTGTATGTACACGACATACCCAAGTTGGAGTCGACTATGTTCCAGTATGCAGATGACATCGCTCTGCTAGCTGGGAATAGAGATCTGGATGCGGGTGCTAGTACACTGGAACGGGACCTAGGAAGGCTATCAACATATTTTAGAAACTGGAGACTAAAGCCCAACCCAACCAAAACAGAGGTCACAACCTTCCATCTTAATAACCGACAGTCCAATGCCAGAATCAATGTGCACTTTGAGGGAGTTCTCTTACACCAGACTGACCACCCGAAATACCTAGGCGTTACACTGGATCGCACCCTTTCCTTTAAGAAACATGTGGACTCCCTCTGTGGGAAACTGAAAGCTAGAAATAATGTCATCCAGAAGCTGGCAGGATCCGGTTGGGGGGCTGATGCAGAAACATTGAGAACTGCGGGATTGTCACTCGTCTACTCCACTGCGGAATACTGCGCCCCTGTATGGGATGGTAGCGCCCATGCCAAAAAAGTAGACATCCAGCTCAACTCCACAATGAGAACAATAACTGGTGTATTAAAGCCCACCCAGTGCCAGTGGTTACCTGTCCTGGCCAATATTGTACCTCCCCACCTCCAGAGAGATGCCTCCACAGTGAGAGAGTGGACAAGAGCTAAAACCAACACCTCCCTTCTGAGCTCGGCGCTAGAGGACATCCCAAACACCCGACTAAAATCGAGGAAGCCCTTCTGGTCCAGAGCACAAGCCCTGGAGAGTAATGGATTTGTTGCGGAACAGGCGTGGCGAGATGAATGGAGCAGTGGGGACACCAGGAACAAACATTTAATAACAGACCCATCAGGGAGAGTGGCCGGTTTTGGGCTGGAGCGCAGGGAATGGGTGACATTGAACCGCATTAGAACGGGTTGCAGCAGGAGCGCAGCGGAGCGCCACAGGTGGGGATATATCACCGACCCCCGATGCGACTGCGGTGCTGTCTCTCAGACCCTACATCATATAGTGGAGGAGTGCCCTATGCACAGTTTCCATGGAACGATGGAGGATTTACATAGTTTGACGACCGAAGCCAAAGCATGGCTGAGGGACAACCACATTTATTCGCCTGTTCCCGATGCAACAAGAGATACATTACCAAAGCTGGATTACAGGGACATATCAAGTAAGAAGCAACACGAGAAATCCACGACGAACCAAATACAAAAGTGCAACGAATGCGATAAGACTTTTATAAACGTGAGCGGACTCAACACTCACGTTAGACGCGTCCACAAGAAAGAGATAAAGTTCCGATGTACGGAGTGCGGGGTCGGATTCTACAGTTCGTGCGACTTACGCAGCCACGTGCGAAGACACAGCGGAGAACGCCCGTACCCTTGTCATGTCTGCGGGAAATACTTCCGCACGAAAGGAATGAGAAATCAGCACGTTCGAATTCACAGCGGAGAACGTCCGTTTAAATGCGATATTTGCGGCGTCGGTTTCCGGCGTTCTTACGCGCTGCGAAGTCATCGACTAACGCACGCTCCCCACACTCGCTCCATCCCCTGTCCCATTTGTCCGAGATTGTTTAGGCTCAAAGCTGAACTCAATACGCACATGAGACACGTACATTGTGTAGATCCCTTGATGTATACGGCAAACAGTTCATCTAATCAAAAGGAAAATGACAGAAATATAATACCAAAGACAACAAACAAAAGTGACGAAGCAACGAAAGATATTGCCGTGGACGAAAATGTTACGCATGCCGTGGATGATACAAACGATGAAAAAACATTGGTTCTAAATGTCCACCAAACCAGTAACGTCGATTCTTGTTTGTTTACTACGTACTTCGAAGACGGACAACATAACTTCATGGACAATATGGAGGAAGTACAAATGTCTGATCCGGTCTTCAATCAAAGTAATCATCGAGAGATTACGCACTCCGACAAAGTCGTAACTGGAGACAACGTCATGGCATCTACATCTCATCAGCTCGAAGATGCGTCGTCGAATAATCTTTGTATCATATCAGAGCAAAATTTGGCAGGCGGAGAAATCATTTTAGACGGCAATAACATGTTGCCGAACAGTCAATACATTTTGGACGAAAACGTTCAAATAATCGGCGAATTGTCCGAACAATCGAGGAATTTGTTATTCAGAGAAAATGCCGGACATAATAGGGTTTTGGAAATAAACGGTTATCACACGAGATTGGTTATGTTGAATAACGTTGTCGATATTAACGATATAAAATTGGTTAACATCGACAATGATTTGATAAATAAGCAGGTCGACGAATTGACGAATGACAATTTGAACGATCTATACGGATCCAACGTAGTCATAGACAAAGTGTCTATAAACGCCGACATGTCCATAGACGATGATGTTATAGATAGGGGAGGTTCTTTTGTCATCGATTGGCAGGAAAACGAAGATGTCGCCAGTAATGAAAAGTCGTTGGATAATTGCAAGTATTTTTCTGACGCTTAA
Protein Sequence
MSLVFNLESENGQTIPVPVHLNDTFQTFLSRASKVLEKDVNVSSIVGNKDVSLTDNIYQFMLREVLNNNSGKPSDIAHEIVHIPDYNALMEKCILESGDGRKYDVKKQAPKILNLEYYNKRDTPKTKDSKEKNTTNSNNNKCCFCGVYISSSVFISYIFDENDQKEMRKSKHRRNRGAAKVVCDHCLGNDFIKYDEIPKSFDDDTYLIIRNNVQYFYKTKSPEKHRSVKILNSLNRNVDNVDEKLDLKRNSKGSYEITKRKFVLQQTVFYTCRLCKAVVDTLPISHCLDHVSSTSEGLVFPCVLCEYGYTSYKQLADHMSSRHSSHQTSETVLPDLPSEKNDKVLKLLKELLKKQQDETRDEEWLDEDTGIMRKTVTVCENVIVPRVDTSPSKESESDSESGVWIIQADDGDANNGDDNGVIDLDNDVVDLDNDVIDLDNDDNDIDNDVINVDNNVNDIDNGVNDVDNEVIDLDNDVNDSDNAVNGVDKVSDIDNAVNDIDNGAINVDNGVINVDNDVVDNDNNADEDDTIYYQCDTCGEEFDSMESFNCHGCVTQYLNSTSVFILEYPQVEEEVKARVIAVSDGLEKETDVKESERTEEVGQHKCPSCTKSFHTKIRLQFHIRYIHSAGSDPASLRCSICPDLAFSSESALYDHIHFTHPRSKRYTCPVEGCNRQFHIKGVLNNHLGCHTGERTHACDVCEKQFFDRQTLNEHKVTHLKVKPFQCHICNKYLNRKSRLRMHLLNHQSHPASCPVLACKKCSATFPHANAAEEHLNELGHCTSKLCWDTSGLQEDDVTEESVDDPDVVESSLNDSGIDLKSGADLNTDVKQEPCTLFEDVKMEGENTGVDRSSKNDEESVETNGSNNGWSDILAGLSEDARKSITLVEVDKVFRCEFCEKIYWRQEALNIHRSEHEGIVNPYVCHICGAQFSTYSRCTTHKTTHGLYKVEQMVPHEDAFPVIKHFLCEVCNKSYLHWTYLQVHRRLKHSDNVHMYKCLTCGDEFPNSWGVAYHRKKIHGQSSGSAPADEVPDTNVERLWYNCLNESATVFTQESYTSETTFAAESRSIIYLSSPPIVLDDFPHSQHRPVIIKYGIRVPLTTTVPLPRWNFNKANWESFSKDLDNIVQYIPCQTDCYDRFAGAIISTAKKHIPRGFRKEYIPAWNTTCEQLYKRYKETREETVAEELLQALNQGRRERWNETVKDMDFRHSSRKAWCILRKLGAAPPKLPSASSTKPITADDIVKHMVSVSKISVGKERVREVNCDLKKLKSRLSDNSTFSEDFSLTELNSAMRNTKCGKAAGLDEIYPEFIRNMGLRAREWLVQFMNETLKRGKLPGIWKHSKVIAILKPGKDGTCSSHYRPISLLCIPYKLLERLILQRISTSIDAVIPIEQAGFRAGRDCCEQVLALTSSIEAGFQKGLKFSAAFVDLSVAYDTVWRRGLMVKLAETIPCRRILNLLDNMLACRYIRVSLGGKMSRTKVLNNGLPQGSVLAPLLFNLYVHDIPKLESTMFQYADDIALLAGNRDLDAGASTLERDLGRLSTYFRNWRLKPNPTKTEVTTFHLNNRQSNARINVHFEGVLLHQTDHPKYLGVTLDRTLSFKKHVDSLCGKLKARNNVIQKLAGSGWGADAETLRTAGLSLVYSTAEYCAPVWDGSAHAKKVDIQLNSTMRTITGVLKPTQCQWLPVLANIVPPHLQRDASTVREWTRAKTNTSLLSSALEDIPNTRLKSRKPFWSRAQALESNGFVAEQAWRDEWSSGDTRNKHLITDPSGRVAGFGLERREWVTLNRIRTGCSRSAAERHRWGYITDPRCDCGAVSQTLHHIVEECPMHSFHGTMEDLHSLTTEAKAWLRDNHIYSPVPDATRDTLPKLDYRDISSKKQHEKSTTNQIQKCNECDKTFINVSGLNTHVRRVHKKEIKFRCTECGVGFYSSCDLRSHVRRHSGERPYPCHVCGKYFRTKGMRNQHVRIHSGERPFKCDICGVGFRRSYALRSHRLTHAPHTRSIPCPICPRLFRLKAELNTHMRHVHCVDPLMYTANSSSNQKENDRNIIPKTTNKSDEATKDIAVDENVTHAVDDTNDEKTLVLNVHQTSNVDSCLFTTYFEDGQHNFMDNMEEVQMSDPVFNQSNHREITHSDKVVTGDNVMASTSHQLEDASSNNLCIISEQNLAGGEIILDGNNMLPNSQYILDENVQIIGELSEQSRNLLFRENAGHNRVLEINGYHTRLVMLNNVVDINDIKLVNIDNDLINKQVDELTNDNLNDLYGSNVVIDKVSINADMSIDDDVIDRGGSFVIDWQENEDVASNEKSLDNCKYFSDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-