Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756377.1:4436208-4443556[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.017 0.78 10.7 1.0 2 23 196 218 195 218 0.95

2 16 0.37 17 6.5 0.0 3 23 453 476 452 476 0.85

3 16 5.2 2.3e+02 2.9 1.3 1 20 484 503 484 505 0.93

4 16 0.0063 0.29 12.1 1.0 3 23 516 536 515 536 0.96

5 16 0.17 7.7 7.6 2.8 1 19 584 602 584 607 0.93

6 16 1.3 60 4.8 0.1 2 23 702 724 701 724 0.85

7 16 1.6 74 4.5 0.1 1 23 732 755 732 755 0.91

8 16 0.00016 0.0071 17.1 1.1 1 23 761 784 761 784 0.94

9 16 3.4e-05 0.0015 19.2 2.0 1 23 791 813 791 813 0.98

10 16 2.1e-05 0.00096 19.9 2.8 1 23 818 840 818 840 0.97

11 16 2.6e-05 0.0012 19.6 4.4 1 23 846 868 846 868 0.99

12 16 0.0013 0.058 14.3 3.1 1 23 874 896 874 896 0.98

13 16 6.1e-07 2.8e-05 24.7 1.5 2 23 903 924 903 924 0.98

14 16 0.00017 0.0075 17.1 1.5 3 23 932 953 930 953 0.94

15 16 0.0043 0.19 12.6 0.3 1 23 960 982 960 982 0.97

16 16 0.0049 0.22 12.5 1.0 2 23 989 1011 988 1011 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.017	0.78	10.7	1.0	2	23	196	218	195	218	0.95
2	16	0.37	17	6.5	0.0	3	23	453	476	452	476	0.85
3	16	5.2	2.3e+02	2.9	1.3	1	20	484	503	484	505	0.93
4	16	0.0063	0.29	12.1	1.0	3	23	516	536	515	536	0.96
5	16	0.17	7.7	7.6	2.8	1	19	584	602	584	607	0.93
6	16	1.3	60	4.8	0.1	2	23	702	724	701	724	0.85
7	16	1.6	74	4.5	0.1	1	23	732	755	732	755	0.91
8	16	0.00016	0.0071	17.1	1.1	1	23	761	784	761	784	0.94
9	16	3.4e-05	0.0015	19.2	2.0	1	23	791	813	791	813	0.98
10	16	2.1e-05	0.00096	19.9	2.8	1	23	818	840	818	840	0.97
11	16	2.6e-05	0.0012	19.6	4.4	1	23	846	868	846	868	0.99
12	16	0.0013	0.058	14.3	3.1	1	23	874	896	874	896	0.98
13	16	6.1e-07	2.8e-05	24.7	1.5	2	23	903	924	903	924	0.98
14	16	0.00017	0.0075	17.1	1.5	3	23	932	953	930	953	0.94
15	16	0.0043	0.19	12.6	0.3	1	23	960	982	960	982	0.97
16	16	0.0049	0.22	12.5	1.0	2	23	989	1011	988	1011	0.95

Sequence Information

Coding Sequence: ATGTCAACTGATGTTCGACCTCCACAAACAGAGGATTCTGATAATGAGCCTCTGTCTGTTTATACGGAAGAAAGAGGGAATCAGATGAAAAAGAACAAAGATAGTGAGTTTGTTCTGACGTCTCGACCACTTTTCAGCAAAATTTACGAAAAGAAAAAGCTGTGGAGGAAGACAGACATCATCCATGAGAAGATTGAAGCAGAGCAGACTAAACCTCCACCAGAAGCTGACGATTACGGAGATAAAGAAATCGTACAAGTGAAAAGTGAAGTAGAAGAGGTTCCTGTAGTTATTGAGAAGGAAGGGAACTTGGATAATAATGGAGGTTTTACGAATATGTTTATTTCATATATTCTTCCTCCCTTACAATGTGATAGTCCTCCTACTGATGTGTGGTTGGATTCCAAGTCTATCAATCAAACTGGGCCCATTTCTTGTGTTCTGTGCTACGAGTGCTTCCTCAATAAAAACAAGTTGCTTCTCCATTATGTACTTAATCATAAAAAACCATTTTGTGGAACGTGCAGATACTTTGTAACCGACAAGGAATCTTGGGAAAAACATTGGGAATGTCATCTGCCGTTGAGATGTTCTCATTGCCCCGTTAAATTCATGGATGAAGCAAGTCTACGATCTCACTTTGCGACGTATCACAACCTGGCACACTGCCGCATGTGCAATCTCATGTTGCCAGTCGGAGAAGCATTCACCAAACATCTCTACATGAAACATTGCGTTATAATCAATCAGGATAAAGATATCGAAGAAGTGTGGGTCGTTAGAAATCGTAAAACATGGATATTCTCATGTTTACTGTGTGGAAAAGACAACTTACCCAGTGTAGACTTCCTCAAACACTTTTTATATCATCACAAATTTGCGTTGAAGAGTTTAACTAATCTCGTCAACGGGAAAGAATTAAAATTCTCTGTACTTGGAGCTAATATTAGTACTTTTACGCAACTGGCTGAACCAGATTCGACGGAAATTCCTGCAGAATATGCACCACCAAATAATAATCCAGAGGATACCAAAGATGATCCAGtgtgtttaattaaaaaagaaattgtcAGCGATGATGAATCTATGGATGTTAACGAAAATGTAGAGGATACTCCAAATAATGAGAAGGCCGAAGAACCCATTGCGGATATCGGTTCGGAGTTGTCAATTGCTACGCAAAGTTTTCTCGTAAAATGTTCCGGAAGAGAAGATTTCGACGCCACTTTAGTGGAATTTATAAACGTTTCAAAGAATGAATTAGATTACGTCGATAAGAGATTATTAAATGAAACTGTTTCCAGCGAATGTTGGATTCAGTATGACGGTGAATGTACTGATCCTATAAGTATCGCATGTCCGTTGTGCGTCGCAGTTATTACGTTCACGTCTCCGGTAAATTTATCGAACCACATCACAAAACAACACCGTTTGAAACACAACTCTACTTACGTGTGCCGATTCTGTTTAGTTTCCTGCAATTCGTATCAAGAATTGATGAAACATTCGGAAACGGAAAACGCCTGTTTTGAGAATCTCTTATTATGTCAGTTTTGTAACAAGGAATTTTCTACGAGAGAATCGGTTCGTTCTCATCTCGCACAACACAAAAGTGAGTTGAAGAATAATGAGTGTACTAGTCCACATTTAGGATTGAAATGTCGATTCTGTCCTCGACTTTTCTGGAGCGAATTGACGAGAGAGAAACATCACTGTGAAGATCATTACAAGCTTAATAAGGAGCAGTTCTATAGATGTTGCTTGTGTGATAAGATATTTAGCGATAAGATTTGGTGGGCCCATCACGATTTACACGAGCACAGTAATATCTCAAACAAGCAATCAGCCCTGACGTGGATAGCGTTTCGATGTTTAATTTGTTACGACGTTCATCTACAAATTGAAGACTTGAGACGACATTTTCAAGAGATGCATCCGGATTCCAAGAGGTTTTATTGCAATGTCCCAGGCTGCATATCCAATCCATTTAGAATACCGAGATATTTGAAAAGGCATTACGAGGCAAGTGCAgattgtattacttattattatGTGAACCATAAACCCGGCGTCCACTCCCACACCAACAATGAATCGAATCTGCGTTGTGAGGATTGTGGTAAGCAGATGAGTACGATCAGGGCTGCCAACACGCACAGGACCGTGGCACACGGTGACAAGTCTACTTCCAGATTCAAATGTAGGATTTGTGGCTTGGGATTGCCCACAATGCAGGACAGGAAGCTCCACTACCTCGTGGTCCACCCAGACATCCCAGCCTTCACGTGCACCGTGTGTGGTAAAGGATACAATAACAAATCGGCCCTGTACTCTCATCGTACACAGAGTCACTCCGTCAGTCTCATTACGTTCACATGCTCCTATTGTAATAAAGTCTTCAATaAACGTGATTCATACAAGGAACATCTGTTGATTCACATTGGTCCGCGACACGTATGTCCTCACTGCTCCCGAGTGTTTGTGCAGCGCTCCAACATGTTGAGACACGTCCGCCTCCACACGGGGGAGAAGCCCTATCCGTGTAATCACTGCGATAAGACTTTCTCCGACAAGGGCGCCTGCAACTCTCACATGAGaaCACACTCTCGTCAAGATGCATATCCTTGTACATATTGCGGTCAGAAGTTCTTACAGAAACAGAAGCTGAAATATCATTTGAGAAAACACACAGGCgaagaTCTGGAAACGTGTCCCGTATGTGATAAAAAGTTCACAAACAATACAAATCTTCGTGAACATCTCAAAACTCACGACGATTCCTGCCCAGTAAATTGCCCGCACTGTGGTAAAATCTTTACATCGAAACGCTACATGGACCGCCACGTGAGAGATACTCACAGTCATACAGCCGAAGTACATCCCTGCCCCATATGTGCGAGACCCTGCCCTAGACTGATTGCACTGAGAAATCATCTACTAACACACGCTACTGTCAAACATATTTCTTGTTTGCTGTGTGGAAAGAGTTACAACGGAAAGAAAAGTATCAACAGACATTTGAATAAACGGCACGGAATTCAACCGAACGACGATAATTATCGTTCAAATTATTATCAACTGGATCCCAGATACTGCGGCTTAGGACTCGATGAAGAAACTATTTTCAGGGTATTTGGACcagaaaaagaaacaaaacCAAACATGCCAGTTCCCGTACCAATTGTGGAGAACAAAACTCTTAACAAGAAGACGCCGGGCAATGATTCATCCGACAGCTCGGATGACGACTACAAACCATCGTCAACCGTTAAGAGAAAATGTAAAACTGTGAATAAAAAAGATGACAGAAGTGTCAGTGACGGAGATGTACCCGTATCCGGATTAGAACTGGCGTCTTTGAAATCTAGAGCTCGGAGGGAAACGTCGAAAGCCGTGAATTACGTTCTCGATTCTGAGGATGATGTGCCGAAATCCTTCGGTAAAACCGTAAAGAAAAAAGGTAAAGTGAAATGTAAGAAGAGAGTCAAGGTGAAAGATGTTCTTCCGATTGAATATTCAGCAGAGAATGATGATGGAGAGTATGCGTATGTGGATATTAAACAGGAACCAATAGATTAcgattaa
Protein Sequence: MSTDVRPPQTEDSDNEPLSVYTEERGNQMKKNKDSEFVLTSRPLFSKIYEKKKLWRKTDIIHEKIEAEQTKPPPEADDYGDKEIVQVKSEVEEVPVVIEKEGNLDNNGGFTNMFISYILPPLQCDSPPTDVWLDSKSINQTGPISCVLCYECFLNKNKLLLHYVLNHKKPFCGTCRYFVTDKESWEKHWECHLPLRCSHCPVKFMDEASLRSHFATYHNLAHCRMCNLMLPVGEAFTKHLYMKHCVIINQDKDIEEVWVVRNRKTWIFSCLLCGKDNLPSVDFLKHFLYHHKFALKSLTNLVNGKELKFSVLGANISTFTQLAEPDSTEIPAEYAPPNNNPEDTKDDPVCLIKKEIVSDDESMDVNENVEDTPNNEKAEEPIADIGSELSIATQSFLVKCSGREDFDATLVEFINVSKNELDYVDKRLLNETVSSECWIQYDGECTDPISIACPLCVAVITFTSPVNLSNHITKQHRLKHNSTYVCRFCLVSCNSYQELMKHSETENACFENLLLCQFCNKEFSTRESVRSHLAQHKSELKNNECTSPHLGLKCRFCPRLFWSELTREKHHCEDHYKLNKEQFYRCCLCDKIFSDKIWWAHHDLHEHSNISNKQSALTWIAFRCLICYDVHLQIEDLRRHFQEMHPDSKRFYCNVPGCISNPFRIPRYLKRHYEASADCITYYYVNHKPGVHSHTNNESNLRCEDCGKQMSTIRAANTHRTVAHGDKSTSRFKCRICGLGLPTMQDRKLHYLVVHPDIPAFTCTVCGKGYNNKSALYSHRTQSHSVSLITFTCSYCNKVFNKRDSYKEHLLIHIGPRHVCPHCSRVFVQRSNMLRHVRLHTGEKPYPCNHCDKTFSDKGACNSHMRTHSRQDAYPCTYCGQKFLQKQKLKYHLRKHTGEDLETCPVCDKKFTNNTNLREHLKTHDDSCPVNCPHCGKIFTSKRYMDRHVRDTHSHTAEVHPCPICARPCPRLIALRNHLLTHATVKHISCLLCGKSYNGKKSINRHLNKRHGIQPNDDNYRSNYYQLDPRYCGLGLDEETIFRVFGPEKETKPNMPVPVPIVENKTLNKKTPGNDSSDSSDDDYKPSSTVKRKCKTVNKKDDRSVSDGDVPVSGLELASLKSRARRETSKAVNYVLDSEDDVPKSFGKTVKKKGKVKCKKRVKVKDVLPIEYSAENDDGEYAYVDIKQEPIDYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -