Cdis011252.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- Zfy1
- Assembly
- GCA_963576895.1
- Location
- OY756368.1:12333986-12339534[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.6 1.6e+02 3.4 0.9 1 23 200 222 200 222 0.91 2 11 5 2.2e+02 3.0 3.0 2 21 230 249 229 251 0.92 3 11 0.023 1.1 10.3 1.5 1 23 255 278 255 278 0.93 4 11 0.014 0.61 11.0 2.7 1 23 288 310 288 310 0.98 5 11 0.00058 0.026 15.4 0.1 1 20 316 335 316 336 0.95 6 11 9.3e-06 0.00042 21.0 1.0 1 23 343 365 343 365 0.99 7 11 6.3e-05 0.0029 18.4 1.6 1 22 371 392 371 396 0.93 8 11 3.3e-05 0.0015 19.3 1.5 1 23 404 427 404 427 0.97 9 11 1.2e-05 0.00055 20.6 1.5 1 23 433 456 433 456 0.96 10 11 8.6e-05 0.0039 18.0 0.5 1 23 470 492 470 492 0.97 11 11 1.3e-06 5.7e-05 23.7 0.3 1 23 498 521 498 521 0.98
Sequence Information
- Coding Sequence
- ATGAAGGTTTACACTGACAAAATCTGTTGGTGTTGTTTGAAGACTGATGTAGATATGAAATCTCTCGTTAAAAGTCCACTCGTACAAGATTATCTAAATCTTGCTGGCattaagATTAAGGAAGAATCAATCGGAGAGAGTAGTCTTATGCTTGAAAGAGTTCTTCCATGTCTTTCACAAAGTgttttggaattatggtgtacACCAGAAGATCAAGCAGATTTCTATGATGATTTTTTAATGGAAGAATCTGACATTAAGAACGATGAGTCGTATGATTCTGATAATACACCTTTGCTAAAAGTTGAGGCTGGTGATGAGAAAACTAAGACTTCCGATACTACTCCATTATCCCATATAGAACAATGTGATGACATAAATGCACATAAAGAACAAAGCATTCATTTAAAGAGAAaGAAAAACAAAAAGAGTAAAAAAAAGGGTAAAACAAAGAAGAAAGCTAAACAATCTTCAGTTATAATACGGAATAGAATGGTTATACAAACAGAACAGTACAATGTAATACGATTGACTCCAGCACAAGTaatagaagaaaaagaaaaaaatctcaatAGCACCAAATATAAGGAATCTGTATACAAATGTGAACTCTGTGCAAAGGGATATCTGCATGAAGATGTTTATGCCAACCATATGTCCTTCCATGAGcgaAAAGCTAATTATTTGGAATGCAGAATTTGTCATCAATTTCTTGCGTCAAAGATATCTCTACGTGGTCATACTAAATGCCATCTTATTAGATATGAGTGCCGTGAATGCGGGGAAGTGAGAGCTTCTAGACAACATTTACTTGAGCATCATTCTTTACAACATGGCAGTGATCTTGTTCCTCCGAGACGTTACACTTGTAATACATGTGGGAAAACAATGATGAAACGTACAATGTTTCAAAAACATGTCAAACTACATTCACTCACAAGTCGTTTTCCCTGTGAAATGTGTGGGAAGACGCTAAAAACATTGGAAACACTTAGAGCTCACAAACTACCTAAAAAACTCAAGCAATACAAGTGTCCTGATTGTTCCAAGGAGTTTGGTTATTCTTCATCATTGTACTCTCATCGTATAACGCATATTAAAACAAGAGATTTCTACTGTGTGGAGTGTGATTTAAGTTTTAAGACACAAACCAATCTGCGACTACATTTAAATAGAAGTAAGAGACATATCGACCCTGACTCATTGAAGTTCCAATGTGATGGATGTGGGAAACGTTTCGCTACAGAAGAACGACTGAAACATCATTTTGAAACAATTCACATGGGAAAGAAGGAACATAACTGTCCTTCTTGTGACAAAAAGTATGCTTCAAAAGATACCTTACGAGTTCACATACGTAGAGAACACCCAGCTCCAGGGTTTCCAGCCATCGTTGATCTTCCTAAGCATATTTGTGATATATGCAGTAGGGCTTTCAAGGCTAAAGCTGTACTAATAAAGCACATTAGGACTCATACTGGAGAACGCCCTTTCCAATGTACGGAATGTCTTCGAGCCTTTTCCCAGCAAAGCACTTTGACTGCACATATTAAAATTGTACACAGACACGAACCAAAGAGAGTACGACCATCCAAATCCAAAGTAGCTGCTCAATGTTTAATTCAAAGGAATATATCAAACACatcatag
- Protein Sequence
- MKVYTDKICWCCLKTDVDMKSLVKSPLVQDYLNLAGIKIKEESIGESSLMLERVLPCLSQSVLELWCTPEDQADFYDDFLMEESDIKNDESYDSDNTPLLKVEAGDEKTKTSDTTPLSHIEQCDDINAHKEQSIHLKRKKNKKSKKKGKTKKKAKQSSVIIRNRMVIQTEQYNVIRLTPAQVIEEKEKNLNSTKYKESVYKCELCAKGYLHEDVYANHMSFHERKANYLECRICHQFLASKISLRGHTKCHLIRYECRECGEVRASRQHLLEHHSLQHGSDLVPPRRYTCNTCGKTMMKRTMFQKHVKLHSLTSRFPCEMCGKTLKTLETLRAHKLPKKLKQYKCPDCSKEFGYSSSLYSHRITHIKTRDFYCVECDLSFKTQTNLRLHLNRSKRHIDPDSLKFQCDGCGKRFATEERLKHHFETIHMGKKEHNCPSCDKKYASKDTLRVHIRREHPAPGFPAIVDLPKHICDICSRAFKAKAVLIKHIRTHTGERPFQCTECLRAFSQQSTLTAHIKIVHRHEPKRVRPSKSKVAAQCLIQRNISNTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -