Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756376.1:14451838-14458832[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.37 17 6.5 6.2 1 21 186 206 186 207 0.95

2 12 1.4e-05 0.00062 20.5 0.8 1 23 211 234 211 234 0.96

3 12 0.0034 0.15 12.9 1.3 1 23 350 373 350 373 0.95

4 12 0.044 2 9.4 4.6 2 23 381 403 380 403 0.94

5 12 0.046 2.1 9.4 0.3 1 23 409 433 409 433 0.90

6 12 4.1e-05 0.0018 19.0 2.6 1 23 443 466 443 466 0.94

7 12 0.00043 0.019 15.8 4.5 1 23 474 496 474 496 0.99

8 12 3.3e-05 0.0015 19.3 0.6 1 23 505 527 505 527 0.95

9 12 0.0064 0.29 12.1 1.5 1 23 533 555 533 555 0.96

10 12 0.0008 0.036 14.9 8.0 3 23 563 583 561 583 0.96

11 12 1.6e-07 7.2e-06 26.6 1.8 1 23 589 611 589 611 0.99

12 12 0.024 1.1 10.3 0.4 1 23 616 639 616 639 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.37	17	6.5	6.2	1	21	186	206	186	207	0.95
2	12	1.4e-05	0.00062	20.5	0.8	1	23	211	234	211	234	0.96
3	12	0.0034	0.15	12.9	1.3	1	23	350	373	350	373	0.95
4	12	0.044	2	9.4	4.6	2	23	381	403	380	403	0.94
5	12	0.046	2.1	9.4	0.3	1	23	409	433	409	433	0.90
6	12	4.1e-05	0.0018	19.0	2.6	1	23	443	466	443	466	0.94
7	12	0.00043	0.019	15.8	4.5	1	23	474	496	474	496	0.99
8	12	3.3e-05	0.0015	19.3	0.6	1	23	505	527	505	527	0.95
9	12	0.0064	0.29	12.1	1.5	1	23	533	555	533	555	0.96
10	12	0.0008	0.036	14.9	8.0	3	23	563	583	561	583	0.96
11	12	1.6e-07	7.2e-06	26.6	1.8	1	23	589	611	589	611	0.99
12	12	0.024	1.1	10.3	0.4	1	23	616	639	616	639	0.95

Sequence Information

Coding Sequence: atgtttgTTGATATTCACGTTCCATGTAGGACTTGTCTCCTACGAGGAGGGCCAATGAAGGATCTGTTTTCTCAGAAATACGTCCCGAGGCTGGATGAAATGTTAATGTCCAGTACTCAGCTAGAgGTAAATCCACTAGATGGGCTCCCCAAAGTTATTTGTGTCCACTGCTACGATAAGTTATACAAGTCCTACATGTTTAAGAAGATGTGCCAAGAATCGGAGGCTGCATTGAAGAAGCACTCAATTGTTATTGTTCCTATGGAACAGAACAATGTATCAGGAGAAGAAATAGACAGATTGaatcataatgttattatgttagGAGAAGAAATAGACAGATTGaatcataatgttattatgttagATATTCCTGCTCTAATTAAATCAGAACCTTCCGAATTACCAACTACATCGGATGTGTATGTAGATACTCTACAAGATATTTGTGGAAATGGAGATAGTAGTGAGAATACTGATGTGACCAGCAGAGATGACACGTTGAATGAAATCATTATGGATGTGTCTGTACGAGCAAgcagaaagaaaaagaaatacgAATGCTCCAAGTGCAATGGaaaatttaaaaaTTGCGTCCAATATCAGAATCACTACTGTAGCGATGTTAGGTTCACATGCACTGAGTGTAATAAGAGTTATGCCTCACAAGTGAAACTGGAACGACACACTAAACTGGCACATGATAAAGACTTGAATGATTCGTCAGATCTTACATCTATTGTATCAGGATTATTGGAAGTTAAATGTATGCCCGAGGCAAGTCGGATATCAGACATAAAAGAGGAATATGTGGACGTTAAAGATGAAGTAAAGGAAAGAGAAAATATAACTCTACAAGAAGATAATGAGGAAATAATAACTCCACAAGAAGATAATGATGAAATAATAGATAATGAGCCATGTTCTCCTGGACCAAGTAGCAAAGTGAGTGTTGCAGTGAGTAAGAAGacATATCCAAAAGGATTTCCATTTCAAGTCCTTTTAGTTAATCACAAGTTCAGAGAACATCGTATCGGACATATTGTGTTTAGCTGCAGCTCGTGTCAGCTAATGTTCTCCAGTAAGCCTTTGTATCGACGACACAGGAACGAAGTACACTTGGATTTGTCCAAGTTATTAGAGTGTCATGATTGTGGAAAAAAATTTCAATGTCGTTCCACTATGGAGCAGCACATTACGCGAATGCACATATCAAAAACGAAATTCGCATGTTTAAAATGGAATTGTAAAGAATCATTCGCCACAAAGGCGGAAGCAAATCAGCATAAGAAAGTTCACTTATCAGATCCAGTTGATGATACCACATATGTGTGTGACCATTGTAACCAAActTTTAAGCAGAAATACAAGGTGAGGCGACATATACTGGACGGACATATGGGAATTCTACGTAATTGTTTTAAGTGTAAACTGTGTAAAATGCGATTTAATACTCGATACTCATTCAATGTGCATGAGAAGACGCACGACCCTGACCATGGCCTAAAGAAATTCCTGTGTACTGAGTGCGGTAGGGGATTTAAGGGAGCATATCACCTTAGCGTACACATGGCTCGGCACAGGGGAGAAAAGAATTTCAAATGCCAATTCTGCGATAAGAGATTTGTCCGAGCGATTGACAGAAGTGTACACGAAAAATATCACAAAGACACTAAGACACACTTGTGTACCACATGTGGGAAAAGTTTCGTTCGGCATTGTGTCCTGAAGAGGCACCTGCGTACTCACACGGGTGAGAAGCCTTACCAATGCACTTACTGTGACTGGAGGTGCTCTCAGCCAAGTGATCTCAAGGCACACATCAGGCGTCACACTGGAGAGAGaTTTGTTTGTGAAATATGCAGTAAAGATTTCCTTCAAGGCTACCAACTGAAGAATCATAAACTGTCTGCACATGGAATCTTGGATCCTAAAGTTAACTCCCGTGTACAGAAAGTGAAATAA
Protein Sequence: MFVDIHVPCRTCLLRGGPMKDLFSQKYVPRLDEMLMSSTQLEVNPLDGLPKVICVHCYDKLYKSYMFKKMCQESEAALKKHSIVIVPMEQNNVSGEEIDRLNHNVIMLGEEIDRLNHNVIMLDIPALIKSEPSELPTTSDVYVDTLQDICGNGDSSENTDVTSRDDTLNEIIMDVSVRASRKKKKYECSKCNGKFKNCVQYQNHYCSDVRFTCTECNKSYASQVKLERHTKLAHDKDLNDSSDLTSIVSGLLEVKCMPEASRISDIKEEYVDVKDEVKERENITLQEDNEEIITPQEDNDEIIDNEPCSPGPSSKVSVAVSKKTYPKGFPFQVLLVNHKFREHRIGHIVFSCSSCQLMFSSKPLYRRHRNEVHLDLSKLLECHDCGKKFQCRSTMEQHITRMHISKTKFACLKWNCKESFATKAEANQHKKVHLSDPVDDTTYVCDHCNQTFKQKYKVRRHILDGHMGILRNCFKCKLCKMRFNTRYSFNVHEKTHDPDHGLKKFLCTECGRGFKGAYHLSVHMARHRGEKNFKCQFCDKRFVRAIDRSVHEKYHKDTKTHLCTTCGKSFVRHCVLKRHLRTHTGEKPYQCTYCDWRCSQPSDLKAHIRRHTGERFVCEICSKDFLQGYQLKNHKLSAHGILDPKVNSRVQKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -