Cdis014350.1
Basic Information
- Insect
- Ceraclea dissimilis
- Gene Symbol
- ZBTB41
- Assembly
- GCA_963576895.1
- Location
- OY756372.1:5863591-5865416[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.4e-06 0.00015 22.4 2.8 1 23 9 32 9 32 0.97 2 12 0.0041 0.19 12.7 5.1 1 23 50 72 50 72 0.97 3 12 3.5e-07 1.6e-05 25.5 0.4 1 23 77 99 77 99 0.99 4 12 0.00074 0.033 15.0 2.9 1 23 105 128 105 129 0.96 5 12 0.025 1.1 10.2 0.3 1 19 134 152 134 154 0.95 6 12 0.0063 0.29 12.1 3.7 2 23 254 275 253 275 0.97 7 12 0.16 7 7.7 0.7 1 23 294 317 294 317 0.90 8 12 1.1e-05 0.00051 20.7 2.3 1 23 323 345 323 345 0.99 9 12 0.00015 0.0069 17.2 1.6 2 23 351 372 350 372 0.96 10 12 7.9e-05 0.0036 18.1 3.2 2 23 379 401 378 401 0.96 11 12 0.16 7.1 7.7 0.6 1 19 409 427 409 428 0.86 12 12 0.0013 0.059 14.2 0.8 3 23 441 462 440 462 0.96
Sequence Information
- Coding Sequence
- ATGTGGACTCACATGGCCAAGCAACATCAGTGTGATATTTGTAAGAAATACTTTGTGGAGAAAAGTTCCTTACGTAGACACATGAGTACTATTCATGCAGACTTTCGTCCTGGCTCAAAAACAACTCATGGGAGCTCAAAACAGCAGTATTGCTGTTCCAAATGTACTAAAGTGTTCAAGTCACTTACCAAGTTTAACATGCATGCCCAGATGCATGGAAATCCCAATTATGAATGTGAAGTGTGTGGCAAGGTGTACGCTGGGAGATCTCATCTTAGGATTCATCAGAGAATTCACACAGGGGAAAAACCTTTTCAGTGTACAATTTGTGGGGCAAAGTTTGCTTTCAAACATGTCCTTAAATCTCATCAAGCAAGAATACATCACagaattaataaattcaaatgcaACATTTGCTCATTGGTGTTTCTCAAAAAATCTGATTTATCTAACCATGCTACATGTCACATGATTAGTATGAAGAAAGAGAAAAGATCTTACAATACTCAAAAGAACGcaaagtacaataataatagagaATATAAAAAGCAAAAGTCTATGTTGAAATATAACATATCTACAAATAATCCTGAGTACACATTGTTTGGTCAACTAGTGGACATATCCAATAATGAGAAAGATGATGATAATATAAAGATTGAAGAATTTATCAAGCCTAATAAAAAGAATaatcaaaatgaaattattgGAGGGGATAAATATTTCTCATCAATAATCACAAATGAGAAGAAAGACAAGaagtGCAACAAGTGCTGTAAAGAGTTTGAGAGAACGGGAGATCTGAAACGTCACATAATATCTCATATTGTACAAGACATCACCACTAAAGCTAAAGAAGGCAACCAATCCATTCCACATTATGAGTGTAGCATCTGTGGACTGTCAGGATTCCATCAAGTTGATAAGTTCAAAGCACATCTTAGAGAACACGCTAAACTTACATTATACAAGTGCAAGTATTGCGAGAGGGCGTTTGGTGATTCCAGTAACTATTCCAAACACAAGAAAGTAcatggaaataaatatttacaatgtgACATGTGCAGGAGGAAGTTTAATACTAAGAGGATGCTCATCTCTCATATGGAATATCATAAAGGACATCCTCCAACACGATGTGGACATTGTAACAAAGAGTTTTACTTCCCCTCGAGCTTCCGTAAGCACATCAAGATCTCCCACCAAGGTAAGGCAAATGTTACCTACAAATGTGAATATTGTGGGGATCGCTTTAAAACTGTGAAGGAAAAGTGGGAACATCAGTGGGAGCAACATGAAGTGAGGAAGGTGCAAGCTGATTGTGACGTGTGTGGAGCTAAGTTCAGGAAGCTGTGTTTGTTGAGAGCTCATATCTTAAAGGAGCATGGTGAGTCTACTCCTATGCCTACTATTACAATCAAGGAGGAACCTTTAGATATTTTCACTAATACTGAATTTTTGTTATGCAGTGAGGAAGCTGATTTAATTGATTTACCCTga
- Protein Sequence
- MWTHMAKQHQCDICKKYFVEKSSLRRHMSTIHADFRPGSKTTHGSSKQQYCCSKCTKVFKSLTKFNMHAQMHGNPNYECEVCGKVYAGRSHLRIHQRIHTGEKPFQCTICGAKFAFKHVLKSHQARIHHRINKFKCNICSLVFLKKSDLSNHATCHMISMKKEKRSYNTQKNAKYNNNREYKKQKSMLKYNISTNNPEYTLFGQLVDISNNEKDDDNIKIEEFIKPNKKNNQNEIIGGDKYFSSIITNEKKDKKCNKCCKEFERTGDLKRHIISHIVQDITTKAKEGNQSIPHYECSICGLSGFHQVDKFKAHLREHAKLTLYKCKYCERAFGDSSNYSKHKKVHGNKYLQCDMCRRKFNTKRMLISHMEYHKGHPPTRCGHCNKEFYFPSSFRKHIKISHQGKANVTYKCEYCGDRFKTVKEKWEHQWEQHEVRKVQADCDVCGAKFRKLCLLRAHILKEHGESTPMPTITIKEEPLDIFTNTEFLLCSEEADLIDLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00179709;
- 90% Identity
- iTF_00179709;
- 80% Identity
- -