Cdis003884.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceraclea dissimilis
Gene Symbol
-
Assembly
GCA_963576895.1
Location
OY756361.1:1292971-1295490[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.00017 0.0076 17.0 0.8 1 23 98 120 98 120 0.98
2 22 0.00037 0.017 16.0 0.4 1 23 124 146 124 146 0.98
3 22 0.0022 0.099 13.5 0.4 2 23 156 177 155 177 0.95
4 22 0.00014 0.0063 17.3 3.3 1 23 183 205 183 205 0.96
5 22 0.44 20 6.3 4.3 1 23 211 235 211 235 0.96
6 22 0.069 3.1 8.8 3.9 2 23 242 263 242 263 0.97
7 22 0.046 2.1 9.4 0.0 1 23 269 291 269 291 0.97
8 22 0.0015 0.068 14.0 3.0 1 23 297 319 297 319 0.98
9 22 0.00035 0.016 16.1 3.1 3 23 327 347 325 347 0.96
10 22 0.0026 0.12 13.3 7.8 1 23 353 375 353 375 0.97
11 22 0.03 1.3 10.0 6.1 1 23 381 403 381 403 0.98
12 22 3.4 1.5e+02 3.5 3.2 1 23 409 431 409 431 0.98
13 22 0.00032 0.015 16.2 1.3 1 23 437 459 437 459 0.98
14 22 0.0014 0.065 14.1 4.0 1 23 465 487 465 487 0.98
15 22 0.89 40 5.3 3.3 2 23 494 515 493 515 0.96
16 22 9.3e-06 0.00042 21.0 0.9 1 23 549 571 549 571 0.94
17 22 0.024 1.1 10.3 5.3 1 23 605 627 605 627 0.96
18 22 0.034 1.5 9.8 1.0 1 23 633 655 633 655 0.95
19 22 0.089 4 8.5 0.3 1 23 661 683 661 683 0.98
20 22 0.0016 0.072 14.0 1.0 1 23 689 711 689 711 0.96
21 22 0.09 4 8.5 5.4 2 23 718 739 717 739 0.97
22 22 0.0021 0.097 13.6 2.1 2 23 774 796 773 796 0.96

Sequence Information

Coding Sequence
ATGACTGACACTCAAGTTGAGATACCAATAGAAGACGGTAGCTTTAAAAACGAAGAAGATGGTGAGTATGACGAGGATTATAATGATGAAGAAATGGAGGAGTATCATGAAGACTCCAACGAACAACAAGACGGAGAAGTTTACAATGAGGAGGACGAAGGGGAGGACTATGAGAGGGACTCCGATGACGAACCGTTGTATCAAGAAATACCCATTGAATTCGAAACCAAaccgacaaaaaaaaagaaagggAAAGGTAGAAAGCCGAGGAAAAAAATTACAGAAGGACATTTCAAATGTCCCAAATGTAAACAAGCGTTTATATTAGAACGAAACTTTGAGAAACATCTCGCGACGCACACTCAAGTCTTTAAATGTGATATATGTCCGTACAGCACGGAAATACCAAAGAATTTCATCAAACACATTCGATATCATCAAGTCCAAACCACAATCAAATCGTTAAAATGTCAGATGTGCGACGAAGAATGTTCTAGTCCTCAAGAACTGAAAGAACATTTGGTCGTGCACGGTATCAACAAATTACACATCTGCGAATATTGCGGATATTCAACGACAAACAAAACCAATTTAACGAGTCACAAATTGAAACATTCGGAAGATCGTCCGCACAAATGTCCCTTCGAAGGATGTACGTTCAGTTGTAAAGAGgcaaagtatttaaaaaaacattcactCATACATTCGGACGTCAAGCCTCGTTCGTGCGACCAGTGTTCGTACACTTGTAGAAGTTTACCGAgcttaaaaaatcacaaaatgaAACATAcaggcgaaaaacctttcgcgTGTCCTGAATGTCCGTACCGTGCACGAGAGAAAATCGTTTTACAGAAACATTTATTGATTCATCAACCTGAAAAGCCGTTTAGTTGTGAATTGTGTTCGTACACGTGCAGAAGAAAAGCGAGGCTTAACCTCCACATGCAAGTGCACaccacagaaaaaaatattttttgtccgtTGTGTTCGTACAGTTGTCGTACCCCGTCTCATTTGAAGAGTCATCTCATCTCTCATTCGGAAGACCGTCCTTATGCTTGCGATATATGTAATCATCGTTGCCGTAGAAAAAAGACCCTTATCAAACATATTCGACATCACGGATCCAAGTTCCAGcacaaatgtccgttttgtgTATTCAGTTGCAGATTCTCCGATGATTACAAACAACACATGCTCACGCACGGGGAAACGAAACCATTCAAATGTACCAGTTGTACGGATGCATTCGACGATTTTCAAAAGTTTAAATATCACGAGAAAACTCACAGAGACGTCAAACCGTACATTTGCGAAATATGTAACGGATGTTTTCGACGAATCGGTGATTTACGCAATCACAAACTCACGCACAATCTCGAACGTTCGTTTCGATGTCAGGTATGCGACTTCACGGCGCATCGTTCCGCACATCTCAAGGCGCACATGCAAAAGCATAATAAAGAAGATCAACTCGTATGTCCCCTCTGCCTGTATAATTGCCGACGTGACGCACATTacgaaaaacataaaaaggaACATGAAGACGGGGTAGAGTTCACTTGCGATAAATGCTGTTTCAAAACAGCCGACACGAATATGTTGATCGAACATTCGATAACCCACGAATTATATAAAGTGTACAATTGCCCATCTTGCGATAAAACATTTAGTACGAGGTCGGCGTTGAATGCTCATAAGTTCGAACACGACGGAGAAAATGTGTATCATTGTGATAGATGTGATTTTAGCAATAATAACAAGACTAGGTATATTGAACATCGTAAGACACACACAGAATCAACATTGTTCAAATGCAACGAGTGTGATTTCACGACGCATCGTTTGTACAGTTTACGAAAACACAAAACGCTGCATAGCGGAGAGAAGAGGTTTAAATGTTTACAGTGCGATTATTCGACGAGTGTATCGAGCAGATTGAGAATTCATTCCTACATTCACACGGGAGAAAAACCTTTCCGTTGCGATCAATGTTCGTACGCAGGAAGAGACCCGAACATTCTGAGAGTTCACAAAAGGACGCACGAAGATAAAAAACCACACAACTGTACGGAATGCAGTTTCGGAACGAGAAACAAAAGCGATTTAGCGCTTCACATGCTCGTACATACGAAAGAATACCCGCTATCGTGTCCGAAATGTTCGTTTCGATGCAGATTAAAACAGAAACTAAAAACTCATATTAAACGTCACGACGACGCAAGAGTTATCAGATGCAAACGGTGCCCCTTCCAATGTAACATGCATTATCTGATGAAAGAACACATGGAACAGAATCATTACAGAGAACCGCTGAAGTGTGACGTGTGTGTTTACACTTGCAAGACGCAGAAGGCGTTGAAGAATCATATTGAAAAGATGCATGAAGCTAGCGATGAAACGAGCGAACAAAAACGTAAAAACGCTCGTGGCGATTACTGTGAAGAAGAGGAAGATGCCAGTGAATATTTTACGTTGGAAGATTTGGAGAATACTAACGAACAATCCACCGCATAG
Protein Sequence
MTDTQVEIPIEDGSFKNEEDGEYDEDYNDEEMEEYHEDSNEQQDGEVYNEEDEGEDYERDSDDEPLYQEIPIEFETKPTKKKKGKGRKPRKKITEGHFKCPKCKQAFILERNFEKHLATHTQVFKCDICPYSTEIPKNFIKHIRYHQVQTTIKSLKCQMCDEECSSPQELKEHLVVHGINKLHICEYCGYSTTNKTNLTSHKLKHSEDRPHKCPFEGCTFSCKEAKYLKKHSLIHSDVKPRSCDQCSYTCRSLPSLKNHKMKHTGEKPFACPECPYRAREKIVLQKHLLIHQPEKPFSCELCSYTCRRKARLNLHMQVHTTEKNIFCPLCSYSCRTPSHLKSHLISHSEDRPYACDICNHRCRRKKTLIKHIRHHGSKFQHKCPFCVFSCRFSDDYKQHMLTHGETKPFKCTSCTDAFDDFQKFKYHEKTHRDVKPYICEICNGCFRRIGDLRNHKLTHNLERSFRCQVCDFTAHRSAHLKAHMQKHNKEDQLVCPLCLYNCRRDAHYEKHKKEHEDGVEFTCDKCCFKTADTNMLIEHSITHELYKVYNCPSCDKTFSTRSALNAHKFEHDGENVYHCDRCDFSNNNKTRYIEHRKTHTESTLFKCNECDFTTHRLYSLRKHKTLHSGEKRFKCLQCDYSTSVSSRLRIHSYIHTGEKPFRCDQCSYAGRDPNILRVHKRTHEDKKPHNCTECSFGTRNKSDLALHMLVHTKEYPLSCPKCSFRCRLKQKLKTHIKRHDDARVIRCKRCPFQCNMHYLMKEHMEQNHYREPLKCDVCVYTCKTQKALKNHIEKMHEASDETSEQKRKNARGDYCEEEEDASEYFTLEDLENTNEQSTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-