Basic Information

Insect: Ceraclea dissimilis
Gene Symbol: -
Assembly: GCA_963576895.1
Location: OY756358.1:13510649-13514735[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.9e-07 1.3e-05 25.7 1.2 2 23 274 295 273 295 0.98

2 9 4.1e-06 0.00018 22.1 3.0 1 23 300 322 300 322 0.99

3 9 9.5e-05 0.0043 17.8 2.9 1 23 328 350 328 350 0.99

4 9 5e-06 0.00022 21.9 1.6 1 23 356 378 356 378 0.98

5 9 5.5e-06 0.00025 21.7 5.5 1 23 384 406 384 406 0.98

6 9 2.2e-06 9.7e-05 23.0 0.2 1 23 412 434 412 434 0.98

7 9 1e-07 4.6e-06 27.2 0.7 1 23 440 462 440 462 0.98

8 9 7.8e-06 0.00035 21.2 2.4 2 23 469 490 468 490 0.97

9 9 1.2 54 4.9 0.6 8 20 504 516 503 518 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.9e-07	1.3e-05	25.7	1.2	2	23	274	295	273	295	0.98
2	9	4.1e-06	0.00018	22.1	3.0	1	23	300	322	300	322	0.99
3	9	9.5e-05	0.0043	17.8	2.9	1	23	328	350	328	350	0.99
4	9	5e-06	0.00022	21.9	1.6	1	23	356	378	356	378	0.98
5	9	5.5e-06	0.00025	21.7	5.5	1	23	384	406	384	406	0.98
6	9	2.2e-06	9.7e-05	23.0	0.2	1	23	412	434	412	434	0.98
7	9	1e-07	4.6e-06	27.2	0.7	1	23	440	462	440	462	0.98
8	9	7.8e-06	0.00035	21.2	2.4	2	23	469	490	468	490	0.97
9	9	1.2	54	4.9	0.6	8	20	504	516	503	518	0.91

Sequence Information

Coding Sequence: ATGATGCCGGTATTTAAAATGAACTTTCACAAGAAAATTATGAGTTGCACTGAGATTCAGGTATGGCAAAACGATGGATTACCAAATAagatatgtaaaaaatgtattgcaAAACTTCACATAGCGTATCAGTTCAAGAGGTTGTGTGAAAATAGTGATATTCAATTAAGAGAATACAAAAGAAGATGTATAGATGAATGTACCAGTGACACTGAGAATGAAGATGTTGATGCAGTGGAAGAAAATcaagatgaaaataataaagtcACTCATATTGAAGATACAGTAAATTCTCAAACACAACAACACAGTATTGACATCACAACATTAAGCGTACCTCAAGACTTTACTTATCATGACTGTATTCCTCTCAATGACTCGAGACATTACGAATCATTACAGAGTATTAGTGCCAATGATATTAGTTATGATCCACATATAATATTCGGTGGATCCACAATTATGCCCGCAATCGCTCCTGTTAATTTGACGTCGCAAGGGCAACTGCCAATGGCTGGCAATTATAATATTCAGAGCATTAACCCCAATGTGAATTATccaaataattacattatttccaGTTTATCACACACTACTAGAATGATCCCTCCATCACAAGTGTTAAATATGGATAATATTAATGATCAAAATAACGATGTTCCTCAGCGTAATAATAGTGCAGACGATTATGTACAACAAGTTGTGGAGGTTCCTACGACTCAGGATGAATTTAAAGATAACAAGACAGTATCTCCAGTTGTCAAACGGAGTAGAAAGGAATCCCttaagttattttataaaaagtgcgAAGAAGAGAATAGATGTCCTATTTGTAATAAGACCTTTGCAACTATGGGGAAGTTGACTAGACACATGAAGACACACGGAGATAAACCATTCAAATGCAAAATATGTAAGAAGTCATTTGCACACATGGGGAACTACCGTGTGCATCTGCGTGTGCACAGTGACGAACGTCCGTTCCGTTGTGAGGTGTGCCAGCGGGGCTGCAGGCAGCAGCAGGACCTGGACAAGCACCTGCGCACGCACACGGGAGAGAAACCCCACCAGTGTGATATATGTCTCAGGGGATTCTCCACTAGCAGCAATCTAGTGGTACATAAAAGAACACATTCGGGAGAGAAACCTTATGTTTGTTGTGTCTGCAACAAGACCTTCTGTCAGTCCAATGAGTTGAGTAAACACATGAGAGTTCACACGGGGGAGAAGAGTCATACATGCTCTATCTGCGGGAGGGGATTCAATGGAGCCTCCACTCTGGCAGTGCACATGAGGATACATACGGGACAGAAGCCGTACATATGTCATATCTGTGATAAAGGATTTACTCAGTCGTCTGGTCTGACAGTTCACCTGCGCATTCATTTAGCACAGTCAGACTTGCAGTGTCCTCAATGTCCTCGCTCATTTTCAACTCACCAAGAACTTGAACATCATGTCATGACTCATAAACCTAAGGATCTGTATTCCACATATACTGGCAGTCTCAAAAGGTTTTCTAAAAAGACTCATCTGACTAAACATGAAATATCTAAGAATAGAAATACTTCctctaaattataa
Protein Sequence: MMPVFKMNFHKKIMSCTEIQVWQNDGLPNKICKKCIAKLHIAYQFKRLCENSDIQLREYKRRCIDECTSDTENEDVDAVEENQDENNKVTHIEDTVNSQTQQHSIDITTLSVPQDFTYHDCIPLNDSRHYESLQSISANDISYDPHIIFGGSTIMPAIAPVNLTSQGQLPMAGNYNIQSINPNVNYPNNYIISSLSHTTRMIPPSQVLNMDNINDQNNDVPQRNNSADDYVQQVVEVPTTQDEFKDNKTVSPVVKRSRKESLKLFYKKCEEENRCPICNKTFATMGKLTRHMKTHGDKPFKCKICKKSFAHMGNYRVHLRVHSDERPFRCEVCQRGCRQQQDLDKHLRTHTGEKPHQCDICLRGFSTSSNLVVHKRTHSGEKPYVCCVCNKTFCQSNELSKHMRVHTGEKSHTCSICGRGFNGASTLAVHMRIHTGQKPYICHICDKGFTQSSGLTVHLRIHLAQSDLQCPQCPRSFSTHQELEHHVMTHKPKDLYSTYTGSLKRFSKKTHLTKHEISKNRNTSSKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -