Cdis000164.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceraclea dissimilis
Gene Symbol
-
Assembly
GCA_963576895.1
Location
OY756358.1:2405436-2407937[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.001 0.046 14.6 2.3 1 23 267 290 267 290 0.94
2 15 0.00013 0.0057 17.4 1.0 1 23 309 331 309 331 0.98
3 15 9.5e-07 4.3e-05 24.1 1.0 1 23 337 359 337 359 0.99
4 15 0.026 1.2 10.2 2.8 1 23 365 387 365 387 0.95
5 15 1.3e-05 0.0006 20.5 0.6 1 23 393 415 393 415 0.98
6 15 0.45 20 6.3 5.8 1 23 421 443 421 444 0.93
7 15 0.0012 0.054 14.4 2.7 1 23 570 592 570 592 0.97
8 15 0.0099 0.44 11.5 3.4 1 23 598 620 598 620 0.98
9 15 0.0025 0.11 13.4 0.9 1 23 625 647 625 647 0.97
10 15 0.0016 0.07 14.0 2.1 1 23 653 675 653 675 0.98
11 15 0.00028 0.013 16.4 5.3 1 23 681 703 681 703 0.97
12 15 0.026 1.2 10.2 2.6 1 23 709 731 709 731 0.98
13 15 0.00012 0.0054 17.5 0.0 1 23 737 759 737 759 0.97
14 15 3.8e-05 0.0017 19.1 2.5 1 23 765 787 765 787 0.97
15 15 0.0017 0.078 13.9 2.3 2 23 798 820 797 820 0.95

Sequence Information

Coding Sequence
ATGGAGCAGAACAGACTACAGAATCATATCTACATGGAAACACCAAAAGAATACAACATCGAAGTCGTACACAAAGACAACATCCTCCACACAACGGAATACATCGGAAACTATCCGACATTGTTTGATAAAAACATCACATTAACTAACGACGCGATTATACAtccaaaacaaaacaatttataCTTAAATGCACGAAATCTGAGAGAGATCGCTATCATTCCCGACTCTACAATAAGGATTGGACAAATTATATGCCACGAACAAGCTTATGAGAATGTCGAATCGAAAACACAACACCAAATCGTTACGATGGATAGAAACAATGTTCCAGATGATGAGGCAAAGACGTTTTTATATTCGAACAAACAAAGCGGAATCGAATTTATCTCTCCGGATTCGTCGACCGTAAGAGACTACAACCTGATTGAATCTCATTATGTAACCTTGGATAATCGAGAGCAACAATTAATACCGCAGAACATGTACACCAATATACAACCTATCGGTCATTTCCAACAACAAAAAACACTTATCGATGATGGTGGGTTAATATATCAAACAAAACAATTAAATGTGGATTACTCGCAAACACAAACGCAAGAAGTTATATTCCAAACGAAACAGTTGacaaatgaaaataagttaagTAACGATTTAGCGAACTATGAGAGCGGGAACAATTTAAATTTGGACGTTAACACTTCAAACTATGAAACTAACTGTGTTGTTGAAGACGATTATTCTGCAACGACCACACAACAGACTGAAACGAAACCTGTAAAGAAGAATAAAGATTACCCTTGTACAATGTGTGACGTCACGTTCAATAAATTGAGTTTGTTACACCGTCACAAAAAGGATTCGCACCAGTGCGACAGTACAAATACAAAGAATATGGAAAAATGTAAACGTGACAAGACGTACAGTTGTAACGAATGTACGTTTGTCACCAAATATTCCAGCGCTCTCAAACGCCACCAAGAAGTTCACACGTCTACAAGAAAATACGAATGTGATACGTGCGGTAAGGTGTACAATCAGTTGTTCAATTTGAAGACGCACCAACGAATTCACACAGGACAGAAAGTGTTTCAGTGCGAAGAATGTGACTTTATTACTCCGTACCATTATTCGTTAAAACGTCACAAGATatttcacactggtgaaaaagcGTTTTCGTGTTTCGTGTGCGATAAAAAGTTTTCAGCGGCACCCGATTTAAAGAGACATCTACGATCGCATACGGGACAAAAACCTTATTTGTGTAATTTGTGCGGACGCCTCTTTAGACAGACGGGACATTTGAAATTCCATCGAAGCAAACATCATCCCGAATACGTGGAAGATAAAACTAAATCGAAAccgattataaaaattaaagtgAATCTTCATAATCCTTTATTAACCAATAATCTAACTAACAGTAGTAGCAATATTATAGCAATCAAACCATCGAATACGACAGTTAATTTGTCGCATACCTTAGACAAAACTACTGTCAATTTAATTCCTGCCGCAGAAACGACTAACGTAAAATTAGAGAAATTTGATAAAATACCTAAAAATGAGTCGATCATCGTCACTAATACAACGTTTAGTAAAATTGAttcaaataaattagtaaataaaaaGGAACCAAGCGAATCTGTTGATCAGATCGTAACGTACATACGACCGTACAAAACGAGCGAACCCAAGAAAAACTTTCATTGTGAGATGTGTAGCGAGAGATTTAAGTCATCTCGAGATCTGACAGTTCACAATAAAATACACCAAGGCGAAAAATCTTTTAAATGCGAGACTTGCGATTTTGTCACGTTGCACCCGAGTTCGTTACGAAAACACAAACGTTCGCATTTATTGAAAAAGCACCCTTGTTTGAAATGCAACGCTTCCTTCACCTCGGAAGAACGGTTGAACGTTCATGCGAAAACGCACGATTTGAATAAAAAGTATAGTTGTAATCGTTGTAAGTTCGTGTCGTCGTATTCCAGTGCGTTAAATAGACATAAATTAACTCACGACGTGGAAAAACCTTTTGCCTGTGATATTTGCAATGAGAAATTTTCTCAGCAGTGTCATTTGAACACGCACAAACGTCTACATAGCGGTAAGAAAGTGTACGAATGCAACGAATGTTCGTTTATAACACCGTATCATTATTCGTTGAAAAGACATAAGATTTCTCACACGGGCATTCGACCGTTTCCTTGTACGTTTTGCGACGCCGCGTTTGCGGGCGCTGAAGACTTACGAAGGCACATTAGGGCTCATTTAGGCGAAAAGCCTTTCATTTGTAACATTTGCGGACGATTTTTCAGTCAAGCTGCTCACGTTAAAAATCACAAGAAGAAACATTTCGTCAATCCCGAAATGAAGAAAGTTAAAAAATGTCTCGAATGCGGAGAATCGTTTGGCAATTTGTCTCTACTGCGGCAACACAAAAGCTCTTGTCATAGACAAAATAAAACGATGACATTAAATTCTATATCTGAATGA
Protein Sequence
MEQNRLQNHIYMETPKEYNIEVVHKDNILHTTEYIGNYPTLFDKNITLTNDAIIHPKQNNLYLNARNLREIAIIPDSTIRIGQIICHEQAYENVESKTQHQIVTMDRNNVPDDEAKTFLYSNKQSGIEFISPDSSTVRDYNLIESHYVTLDNREQQLIPQNMYTNIQPIGHFQQQKTLIDDGGLIYQTKQLNVDYSQTQTQEVIFQTKQLTNENKLSNDLANYESGNNLNLDVNTSNYETNCVVEDDYSATTTQQTETKPVKKNKDYPCTMCDVTFNKLSLLHRHKKDSHQCDSTNTKNMEKCKRDKTYSCNECTFVTKYSSALKRHQEVHTSTRKYECDTCGKVYNQLFNLKTHQRIHTGQKVFQCEECDFITPYHYSLKRHKIFHTGEKAFSCFVCDKKFSAAPDLKRHLRSHTGQKPYLCNLCGRLFRQTGHLKFHRSKHHPEYVEDKTKSKPIIKIKVNLHNPLLTNNLTNSSSNIIAIKPSNTTVNLSHTLDKTTVNLIPAAETTNVKLEKFDKIPKNESIIVTNTTFSKIDSNKLVNKKEPSESVDQIVTYIRPYKTSEPKKNFHCEMCSERFKSSRDLTVHNKIHQGEKSFKCETCDFVTLHPSSLRKHKRSHLLKKHPCLKCNASFTSEERLNVHAKTHDLNKKYSCNRCKFVSSYSSALNRHKLTHDVEKPFACDICNEKFSQQCHLNTHKRLHSGKKVYECNECSFITPYHYSLKRHKISHTGIRPFPCTFCDAAFAGAEDLRRHIRAHLGEKPFICNICGRFFSQAAHVKNHKKKHFVNPEMKKVKKCLECGESFGNLSLLRQHKSSCHRQNKTMTLNSISE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-